BacMap

Definition	Serratia proteamaculans 568 chromosome, complete genome.
Accession	NC_009832
Length	5,448,853

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The map label for this gene is dgoT [H]

Identifier: 157368294

GI number: 157368294

Start: 45743

End: 47035

Strand: Direct

Name: dgoT [H]

Synonym: Spro_0045

Alternate gene names: 157368294

Gene position: 45743-47035 (Clockwise)

Preceding gene: 157368293

Following gene: 157368295

Centisome position: 0.84

GC content: 55.38

Gene sequence:

>1293_bases
ATGGAAATAACCTTAACCTCAGCACCAAAAAGTAAACGCCGCTATCTGACATTATTCATGATATTTGTCACCGTGGTGAT
CTGCTATGTCGACCGTGCCAATCTGGCGGTGGCTTCGGCGCATATTCAGCAGGAGTTCGGCATCAGCAAGGCGCAGATGG
GCTATATTTTCTCTGCTTTTGCCTGGACCTATACCCTGTGCCAGATCCCTGGCGGTTGGTTTCTGGATCGCGTCGGCTCA
AAACTGACCTATTTTATTGCCATTATGGGCTGGTCAATTGCGACGTTGCTGCAGGGGTTCGCCAGTGGCCTGGTATCACT
GATTGGCCTGCGTGCGGTGACCGGGTTGTTTGAAGCGCCGGCATTTCCCACCAATAATCGCATCGTCACCAGTTGGTTCC
CCGAGCAGGAGCGGGCTTCGGCGGTGGGGTTCTATACTTCCGGTCAGTTTGTCGGGCTGGCGTTTTTGACGCCGCTATTG
ATCTGGGTACAAGAGATCCTCAGTTGGCACTGGGTGTTCATCATCACCGGCGGTGTCGGCATCGTCTGGGCGTTGGTGTG
GCAGCGTGTTTATCAGTCGCCGCGCAACAGCAAAGGGGTGAACGACGCCGAGCTGAAATATATTCAGGACGGTGGCGGTA
TGGTGGATGGCGACGTCGCGTCGGAAAAGAAAAACCGCGTAGCGCTCACCGCTGCCGACTGGAAACTGGTGTTTCACCGC
AAGCTGGTGGGGGTGTATCTCGGCCAGTTCGCTATTACCTCAACGCTGTGGTTCTTCCTCACCTGGTTCCCGAATTATCT
GACGCAGGAAAAGCACATTGCCGCACTGACCGCCGGTTTTATGACCACGGTGCCCTTCCTGGCGGCGTTCTGCGGCGTGT
TGTTATCCGGTTTTGTTGCCGATCGCTTGCTACGCAGCGGCCGTTCCATCGGTTTTGCGCGTAAAACGCCTATCATCTGC
GGATTGCTGCTCTCTACCTGCATCATGGGGGCCAATTACACCAACGATCCGCTGTGGATTATGGTGTTGATGGCGCTGGC
GTTCTTTGGCAACGGTTTCGCCTCCATTACCTGGTCGCTGGTGTCATCGCTGGCACCGACCCGATTGATTGGCTTGACCG
GTGGGGTGTTTAACTTTGTCGGCGGGCTGGGGGGGATCACAGTACCCTTGGTGGTCGGTTATCTGGCGCAGGATTATGGT
TTTGCTCCCTCACTGATTTATATCGCCGTGGTGGCACTACTCGGCGCGTTGTCGTATCTGTTGTTGGTGGGTGATGTGAA
ACGCGTTGGCTGA

Upstream 100 bases:

>100_bases
TAAAAACACCATCAATTGAATTAAATAATTCTGTTAACCCGGAAGGGGATCCCCTACTTCTCTTCCGTCTTAAAATCCGA
AAAATAACGGAATAAAAATA

Downstream 100 bases:

>100_bases
TCCGGTAAGATGGCGGCTCAGTGCCAGCATGCGCAGGGGAGCCGCCATGAGCCATCGGGAAAAACAGCTGACTTTTGATC
CACGTGGGCATCAGCTAACC

Product: d-galactonate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MEITLTSAPKSKRRYLTLFMIFVTVVICYVDRANLAVASAHIQQEFGISKAQMGYIFSAFAWTYTLCQIPGGWFLDRVGS
KLTYFIAIMGWSIATLLQGFASGLVSLIGLRAVTGLFEAPAFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLL
IWVQEILSWHWVFIITGGVGIVWALVWQRVYQSPRNSKGVNDAELKYIQDGGGMVDGDVASEKKNRVALTAADWKLVFHR
KLVGVYLGQFAITSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFCGVLLSGFVADRLLRSGRSIGFARKTPIIC
GLLLSTCIMGANYTNDPLWIMVLMALAFFGNGFASITWSLVSSLAPTRLIGLTGGVFNFVGGLGGITVPLVVGYLAQDYG
FAPSLIYIAVVALLGALSYLLLVGDVKRVG

Sequences:

>Translated_430_residues
MEITLTSAPKSKRRYLTLFMIFVTVVICYVDRANLAVASAHIQQEFGISKAQMGYIFSAFAWTYTLCQIPGGWFLDRVGS
KLTYFIAIMGWSIATLLQGFASGLVSLIGLRAVTGLFEAPAFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLL
IWVQEILSWHWVFIITGGVGIVWALVWQRVYQSPRNSKGVNDAELKYIQDGGGMVDGDVASEKKNRVALTAADWKLVFHR
KLVGVYLGQFAITSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFCGVLLSGFVADRLLRSGRSIGFARKTPIIC
GLLLSTCIMGANYTNDPLWIMVLMALAFFGNGFASITWSLVSSLAPTRLIGLTGGVFNFVGGLGGITVPLVVGYLAQDYG
FAPSLIYIAVVALLGALSYLLLVGDVKRVG
>Mature_430_residues
MEITLTSAPKSKRRYLTLFMIFVTVVICYVDRANLAVASAHIQQEFGISKAQMGYIFSAFAWTYTLCQIPGGWFLDRVGS
KLTYFIAIMGWSIATLLQGFASGLVSLIGLRAVTGLFEAPAFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLL
IWVQEILSWHWVFIITGGVGIVWALVWQRVYQSPRNSKGVNDAELKYIQDGGGMVDGDVASEKKNRVALTAADWKLVFHR
KLVGVYLGQFAITSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFCGVLLSGFVADRLLRSGRSIGFARKTPIIC
GLLLSTCIMGANYTNDPLWIMVLMALAFFGNGFASITWSLVSSLAPTRLIGLTGGVFNFVGGLGGITVPLVVGYLAQDYG
FAPSLIYIAVVALLGALSYLLLVGDVKRVG

Specific function: Intake of galactonate into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=280, Percent_Identity=26.0714285714286, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI9945322, Length=408, Percent_Identity=25, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI9966811, Length=408, Percent_Identity=24.2647058823529, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI154350196, Length=413, Percent_Identity=23.9709443099274, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI148743791, Length=386, Percent_Identity=27.979274611399, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI21322234, Length=414, Percent_Identity=23.9130434782609, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI148728191, Length=334, Percent_Identity=26.9461077844311, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI5031955, Length=259, Percent_Identity=25.8687258687259, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI87082320, Length=430, Percent_Identity=81.3953488372093, Blast_Score=729, Evalue=0.0,
Organism=Escherichia coli, GI1789152, Length=432, Percent_Identity=41.8981481481481, Blast_Score=353, Evalue=1e-98,
Organism=Escherichia coli, GI1789515, Length=427, Percent_Identity=40.5152224824356, Blast_Score=345, Evalue=3e-96,
Organism=Escherichia coli, GI2367379, Length=412, Percent_Identity=28.8834951456311, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI2367193, Length=410, Percent_Identity=27.8048780487805, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI87082071, Length=441, Percent_Identity=21.7687074829932, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788573, Length=441, Percent_Identity=21.9954648526077, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533554, Length=439, Percent_Identity=24.6013667425968, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115533556, Length=434, Percent_Identity=24.8847926267281, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535049, Length=434, Percent_Identity=23.7327188940092, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71997452, Length=405, Percent_Identity=24.1975308641975, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17560030, Length=402, Percent_Identity=24.8756218905473, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17552542, Length=374, Percent_Identity=24.0641711229947, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86561091, Length=245, Percent_Identity=23.6734693877551, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25141318, Length=245, Percent_Identity=23.6734693877551, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI25141316, Length=245, Percent_Identity=23.6734693877551, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25141341, Length=188, Percent_Identity=26.063829787234, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17554962, Length=322, Percent_Identity=24.5341614906832, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32565916, Length=261, Percent_Identity=23.3716475095785, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32565914, Length=261, Percent_Identity=23.3716475095785, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193205400, Length=362, Percent_Identity=21.8232044198895, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17569727, Length=344, Percent_Identity=23.546511627907, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17554148, Length=361, Percent_Identity=23.2686980609418, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71991448, Length=373, Percent_Identity=23.3243967828418, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71991453, Length=373, Percent_Identity=23.3243967828418, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550460, Length=327, Percent_Identity=26.2996941896024, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24648416, Length=412, Percent_Identity=24.5145631067961, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21356189, Length=412, Percent_Identity=24.5145631067961, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI28573299, Length=405, Percent_Identity=24.6913580246914, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24653727, Length=387, Percent_Identity=27.1317829457364, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24655255, Length=286, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24658658, Length=427, Percent_Identity=24.3559718969555, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24639764, Length=415, Percent_Identity=24.3373493975904, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24655271, Length=405, Percent_Identity=22.7160493827161, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI20130135, Length=405, Percent_Identity=22.7160493827161, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19922400, Length=425, Percent_Identity=24.7058823529412, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24654215, Length=425, Percent_Identity=24.7058823529412, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI62484226, Length=310, Percent_Identity=23.2258064516129, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573708, Length=288, Percent_Identity=24.6527777777778, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28573707, Length=288, Percent_Identity=24.6527777777778, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24658689, Length=415, Percent_Identity=23.855421686747, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45552797, Length=415, Percent_Identity=23.855421686747, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24583789, Length=384, Percent_Identity=23.4375, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45550495, Length=419, Percent_Identity=21.2410501193317, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24584153, Length=314, Percent_Identity=24.8407643312102, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24641682, Length=440, Percent_Identity=22.5, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI19920686, Length=404, Percent_Identity=21.7821782178218, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20130167, Length=439, Percent_Identity=22.3234624145786, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24658674, Length=417, Percent_Identity=22.0623501199041, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI20129235, Length=325, Percent_Identity=23.3846153846154, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281361682, Length=347, Percent_Identity=23.0547550432277, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651789, Length=438, Percent_Identity=23.2876712328767, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24651787, Length=438, Percent_Identity=23.2876712328767, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24580790, Length=394, Percent_Identity=24.1116751269036, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45550364, Length=219, Percent_Identity=23.7442922374429, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221474708, Length=161, Percent_Identity=31.055900621118, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR000849
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47005; Mature: 47005

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITLTSAPKSKRRYLTLFMIFVTVVICYVDRANLAVASAHIQQEFGISKAQMGYIFSAF
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AWTYTLCQIPGGWFLDRVGSKLTYFIAIMGWSIATLLQGFASGLVSLIGLRAVTGLFEAP
HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLLIWVQEILSWHWVFIITGGVG
CCCCCCEEEEEECCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHH
IVWALVWQRVYQSPRNSKGVNDAELKYIQDGGGMVDGDVASEKKNRVALTAADWKLVFHR
HHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCEECCCHHCCCCCEEEEEEHHHHHHHHH
KLVGVYLGQFAITSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFCGVLLSGFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLLRSGRSIGFARKTPIICGLLLSTCIMGANYTNDPLWIMVLMALAFFGNGFASITWSL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VSSLAPTRLIGLTGGVFNFVGGLGGITVPLVVGYLAQDYGFAPSLIYIAVVALLGALSYL
HHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLVGDVKRVG
HHHHHHHHCC
>Mature Secondary Structure
MEITLTSAPKSKRRYLTLFMIFVTVVICYVDRANLAVASAHIQQEFGISKAQMGYIFSAF
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AWTYTLCQIPGGWFLDRVGSKLTYFIAIMGWSIATLLQGFASGLVSLIGLRAVTGLFEAP
HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLLIWVQEILSWHWVFIITGGVG
CCCCCCEEEEEECCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHH
IVWALVWQRVYQSPRNSKGVNDAELKYIQDGGGMVDGDVASEKKNRVALTAADWKLVFHR
HHHHHHHHHHHCCCCCCCCCCHHHHEEEECCCCEECCCHHCCCCCEEEEEEHHHHHHHHH
KLVGVYLGQFAITSTLWFFLTWFPNYLTQEKHIAALTAGFMTTVPFLAAFCGVLLSGFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLLRSGRSIGFARKTPIICGLLLSTCIMGANYTNDPLWIMVLMALAFFGNGFASITWSL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VSSLAPTRLIGLTGGVFNFVGGLGGITVPLVVGYLAQDYGFAPSLIYIAVVALLGALSYL
HHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LLVGDVKRVG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]