Click here to switch to the map view.

The map label for this gene is dgoA [H]

Identifier: 157368292

GI number: 157368292

Start: 43762

End: 44379

Strand: Direct

Name: dgoA [H]

Synonym: Spro_0043

Alternate gene names: 157368292

Gene position: 43762-44379 (Clockwise)

Preceding gene: 157368291

Following gene: 157368293

Centisome position: 0.8

GC content: 60.68

Gene sequence:

>618_bases
ATGAGCTGGAATACTGAACTGCCGCTGATTGCCATCCTGCGCGGCATTACGCCGCAGGAGGTGGCTGATCACGTACAAAC
CTTGCTTGAGGCGGGGTTCGATGCAATTGAAATACCGATGAACTCGCCGGACTGGCAGCAAAGCATCGGTGATACGGTGA
AGAAATTCGGCGATCGCGCCCTGATTGGTGCCGGCACCGTGCTGCAACCTGCGCAGGTGGAAGAGTTGGCCGCGCTGGGT
GGTCAACTGGTGGTGACTCCCAATACCCAACCGGCGGTGATCCGCAGGGCCGTGGCGCTGGGTATGACGGTTTGCGCCGG
TTGCGCCACCGCGTCAGAAGCATTCAACGCACTGGAGGCCGGGGCTCAGGCATTGAAGATTTTCCCCTCGGTCTCCTTTG
GCCCGGACTATATCAAGGCGCTGAAAGCGGTTCTGCCGCCTCAGATCCCTGTTTTTGCCGTCGGCGGCATCACGCCGGAA
AACTTGCATCTGTATCTGGCCGCAGGCTGCGTGGGTGCCGGGTTGGGGGGCGATCTCTATCGCGCCGGCCAATCGGTGGA
ACGCACCGCTCAGCAGGCTGCCGCTTTCGTTCGGGCCTATAAGGAAGCCACTCAATGA

Upstream 100 bases:

>100_bases
CTTGGCGAGCGTTATGCCCAGGCACTGACTATGGCCGGGATACGCCACCAGATCCTGGATGGCGATCGGGCTTTCCAATC
GGGAATAAGGAGCATTGTGC

Downstream 100 bases:

>100_bases
AAATAACCAAAATGACCACCTATCGGCTACCGCCGCGCTGGATGTTCCTGAAGATTGAAACCGATGAAGGCATCGTCGGT
TGGGGTGAACCGGTGATTGA

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSWNTELPLIAILRGITPQEVADHVQTLLEAGFDAIEIPMNSPDWQQSIGDTVKKFGDRALIGAGTVLQPAQVEELAALG
GQLVVTPNTQPAVIRRAVALGMTVCAGCATASEAFNALEAGAQALKIFPSVSFGPDYIKALKAVLPPQIPVFAVGGITPE
NLHLYLAAGCVGAGLGGDLYRAGQSVERTAQQAAAFVRAYKEATQ

Sequences:

>Translated_205_residues
MSWNTELPLIAILRGITPQEVADHVQTLLEAGFDAIEIPMNSPDWQQSIGDTVKKFGDRALIGAGTVLQPAQVEELAALG
GQLVVTPNTQPAVIRRAVALGMTVCAGCATASEAFNALEAGAQALKIFPSVSFGPDYIKALKAVLPPQIPVFAVGGITPE
NLHLYLAAGCVGAGLGGDLYRAGQSVERTAQQAAAFVRAYKEATQ
>Mature_204_residues
SWNTELPLIAILRGITPQEVADHVQTLLEAGFDAIEIPMNSPDWQQSIGDTVKKFGDRALIGAGTVLQPAQVEELAALGG
QLVVTPNTQPAVIRRAVALGMTVCAGCATASEAFNALEAGAQALKIFPSVSFGPDYIKALKAVLPPQIPVFAVGGITPEN
LHLYLAAGCVGAGLGGDLYRAGQSVERTAQQAAAFVRAYKEATQ

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=205, Percent_Identity=72.1951219512195, Blast_Score=301, Evalue=1e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21382; Mature: 21251

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWNTELPLIAILRGITPQEVADHVQTLLEAGFDAIEIPMNSPDWQQSIGDTVKKFGDRA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCE
LIGAGTVLQPAQVEELAALGGQLVVTPNTQPAVIRRAVALGMTVCAGCATASEAFNALEA
EECCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQALKIFPSVSFGPDYIKALKAVLPPQIPVFAVGGITPENLHLYLAAGCVGAGLGGDLY
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCHHHCCCCHHHH
RAGQSVERTAQQAAAFVRAYKEATQ
HHCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWNTELPLIAILRGITPQEVADHVQTLLEAGFDAIEIPMNSPDWQQSIGDTVKKFGDRA
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCE
LIGAGTVLQPAQVEELAALGGQLVVTPNTQPAVIRRAVALGMTVCAGCATASEAFNALEA
EECCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQALKIFPSVSFGPDYIKALKAVLPPQIPVFAVGGITPENLHLYLAAGCVGAGLGGDLY
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCHHHCCCCHHHH
RAGQSVERTAQQAAAFVRAYKEATQ
HHCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]