| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yieE [H]
Identifier: 157368273
GI number: 157368273
Start: 22989
End: 23714
Strand: Reverse
Name: yieE [H]
Synonym: Spro_0024
Alternate gene names: 157368273
Gene position: 23714-22989 (Counterclockwise)
Preceding gene: 157368274
Following gene: 157368272
Centisome position: 0.44
GC content: 57.85
Gene sequence:
>726_bases ATGGCATGTCATTTTGCCCGATGGATCCCCACATCCAGCGCACTGGATACCCGGAGATTATCCGCCGAGGTCGTTGCTGC AACCGCTGCTTTTTCCGTTAAACGCCGCCAGCGATTCCTGCAGGGGCGCATCCTGCTCGCAGAAATGATGTTTTATCTTT ATGGCTTGTCGACATTGCCGGCTCTCGCCACCACCCCCACCGGACGCCCCTGTTTCGTCGATAATCACCTGCCCGATTTC AGCCTGGCCTATGCCAGCGATACGGTGGGGGTTTTGCTCAGCCAGGAAGGCAAGGTAGGCCTGGATATTGAAGTCATGCG TGCCCGTGCCGGGCAACATAGAGAGCTGCAACACCAATACCAAACGCCGGCAGAAAACGCCTGGATCAGCGCACAATACG ACCGGCTGGAGGCGGAAACCCAACTGTGGAGCATTCGCCAGAGCGTGCTGAAGCTTTCCGGCCTGGGTAACAGCGGACAA TCGACGCTGCTGCTGCACCCTTTTTCCGGCCATTTGCGCTCCAGCATCACCCCCCAGGTTCATGTGATGAGCGATGCCGA CGAATACCTGAGTTGGGCTTGCGCACGTGAACCCAACCTGGAGCGCTTAATCTGCTGGCAATACGAAGCGGGTAAAGGCC TGCACAAGCACGGCGAAATCTCCCCGCGAGCCCCTGCGCTCTCTACCCGCTTTATGAAATTAACCAGTCTGGCTCTCCAC CGCTGA
Upstream 100 bases:
>100_bases ATAGGATAAAACGCATACTGTTTTTTAATGATAAATCCTCGACTTATGCTTAATCTAACTCCCCAGCGTTTTCAGCGCCC CCTCTGTCACGGAGTGAATA
Downstream 100 bases:
>100_bases CATCGACGATTTATGGCTAATCTGTAAGATAAAACTTTCTTTAACGGATAAATTTCTGCATAAAACTGCAAAGTCAGCCA ATTATTCAGTAATCATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MACHFARWIPTSSALDTRRLSAEVVAATAAFSVKRRQRFLQGRILLAEMMFYLYGLSTLPALATTPTGRPCFVDNHLPDF SLAYASDTVGVLLSQEGKVGLDIEVMRARAGQHRELQHQYQTPAENAWISAQYDRLEAETQLWSIRQSVLKLSGLGNSGQ STLLLHPFSGHLRSSITPQVHVMSDADEYLSWACAREPNLERLICWQYEAGKGLHKHGEISPRAPALSTRFMKLTSLALH R
Sequences:
>Translated_241_residues MACHFARWIPTSSALDTRRLSAEVVAATAAFSVKRRQRFLQGRILLAEMMFYLYGLSTLPALATTPTGRPCFVDNHLPDF SLAYASDTVGVLLSQEGKVGLDIEVMRARAGQHRELQHQYQTPAENAWISAQYDRLEAETQLWSIRQSVLKLSGLGNSGQ STLLLHPFSGHLRSSITPQVHVMSDADEYLSWACAREPNLERLICWQYEAGKGLHKHGEISPRAPALSTRFMKLTSLALH R >Mature_240_residues ACHFARWIPTSSALDTRRLSAEVVAATAAFSVKRRQRFLQGRILLAEMMFYLYGLSTLPALATTPTGRPCFVDNHLPDFS LAYASDTVGVLLSQEGKVGLDIEVMRARAGQHRELQHQYQTPAENAWISAQYDRLEAETQLWSIRQSVLKLSGLGNSGQS TLLLHPFSGHLRSSITPQVHVMSDADEYLSWACAREPNLERLICWQYEAGKGLHKHGEISPRAPALSTRFMKLTSLALHR
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510986, Length=242, Percent_Identity=38.8429752066116, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789886, Length=122, Percent_Identity=34.4262295081967, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26961; Mature: 26830
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACHFARWIPTSSALDTRRLSAEVVAATAAFSVKRRQRFLQGRILLAEMMFYLYGLSTLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALATTPTGRPCFVDNHLPDFSLAYASDTVGVLLSQEGKVGLDIEVMRARAGQHRELQHQY HHHCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHH QTPAENAWISAQYDRLEAETQLWSIRQSVLKLSGLGNSGQSTLLLHPFSGHLRSSITPQV CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCEE HVMSDADEYLSWACAREPNLERLICWQYEAGKGLHKHGEISPRAPALSTRFMKLTSLALH EEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC R C >Mature Secondary Structure ACHFARWIPTSSALDTRRLSAEVVAATAAFSVKRRQRFLQGRILLAEMMFYLYGLSTLP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALATTPTGRPCFVDNHLPDFSLAYASDTVGVLLSQEGKVGLDIEVMRARAGQHRELQHQY HHHCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHH QTPAENAWISAQYDRLEAETQLWSIRQSVLKLSGLGNSGQSTLLLHPFSGHLRSSITPQV CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCEE HVMSDADEYLSWACAREPNLERLICWQYEAGKGLHKHGEISPRAPALSTRFMKLTSLALH EEECCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]