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The map label for this gene is atpH

Identifier: 157368254

GI number: 157368254

Start: 2622

End: 3155

Strand: Direct

Name: atpH

Synonym: Spro_0005

Alternate gene names: 157368254

Gene position: 2622-3155 (Clockwise)

Preceding gene: 157368253

Following gene: 157368255

Centisome position: 0.05

GC content: 52.06

Gene sequence:

>534_bases
ATGTCTGAATTTGTAACTGTAGCTCGCCCCTACGCCAAAGCAGCTTTTGACTTTGCCGTTGAGCATCAAAGCTTGGATCG
CTGGCAGGATATGCTGGCGTTTGCGGCTGATGTCACTCGCAATGAACAGATTTCTGAACTGCTGGCTGGTGCTGTCGCAC
CGGAGACGCTGTCCAGAACGTTCATCGCGGTATGTGGCGAACAACTCGACGAACATGGCCAGAACTTTATCCGTGTAATG
GCCGAAAATGGACGTTTACTGGTTCTTCCTGCGGTGCTGCAGCAGTTCATCGAACTGCGCGCTTTGCTGGAATCCACCGT
CGAAGTCGAGGTGCTCTCTGCGAGCGCACTGAACGACAAACAGCTGGCTAATATTGCCGCTGCGATGGAAAAGCGTCTGT
CACGCAAAGTTAAGCTGAATTGCAAAATTGACAAGTCTGTACTGGCCGGCGTAATTATCCGTGCTGGCGATATGGTGATT
GATGGCAGCGTTCGCGGTCGTCTTGAACGCCTGACAGACGTCTTGCAGTCTTAA

Upstream 100 bases:

>100_bases
TTGCCGGCGCCGAGAAGATCATCGAACGTTCCGTGGATGAAGCTGCTAACAGCGACATCGTTGATAAACTGGTCGCTGAA
CTGTAAGGAGGGAGGGGCTG

Downstream 100 bases:

>100_bases
GGGGACTGGAGCATGCAACTGAATTCCACCGAAATCAGCGAACTGATCAAGCAGCGCATTGCTCAGTTCAATGTGGTGAG
CGAAGCTCACAATGAAGGTA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSEFVTVARPYAKAAFDFAVEHQSLDRWQDMLAFAADVTRNEQISELLAGAVAPETLSRTFIAVCGEQLDEHGQNFIRVM
AENGRLLVLPAVLQQFIELRALLESTVEVEVLSASALNDKQLANIAAAMEKRLSRKVKLNCKIDKSVLAGVIIRAGDMVI
DGSVRGRLERLTDVLQS

Sequences:

>Translated_177_residues
MSEFVTVARPYAKAAFDFAVEHQSLDRWQDMLAFAADVTRNEQISELLAGAVAPETLSRTFIAVCGEQLDEHGQNFIRVM
AENGRLLVLPAVLQQFIELRALLESTVEVEVLSASALNDKQLANIAAAMEKRLSRKVKLNCKIDKSVLAGVIIRAGDMVI
DGSVRGRLERLTDVLQS
>Mature_176_residues
SEFVTVARPYAKAAFDFAVEHQSLDRWQDMLAFAADVTRNEQISELLAGAVAPETLSRTFIAVCGEQLDEHGQNFIRVMA
ENGRLLVLPAVLQQFIELRALLESTVEVEVLSASALNDKQLANIAAAMEKRLSRKVKLNCKIDKSVLAGVIIRAGDMVID
GSVRGRLERLTDVLQS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=177, Percent_Identity=81.3559322033898, Blast_Score=302, Evalue=8e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_SERP5 (A8G7M5)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001476243.1
- ProteinModelPortal:   A8G7M5
- SMR:   A8G7M5
- STRING:   A8G7M5
- GeneID:   5604948
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_0005
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   FIAICGE
- ProtClustDB:   PRK05758
- BioCyc:   SPRO399741:SPRO_0005-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19498; Mature: 19367

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFVTVARPYAKAAFDFAVEHQSLDRWQDMLAFAADVTRNEQISELLAGAVAPETLSRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH
FIAVCGEQLDEHGQNFIRVMAENGRLLVLPAVLQQFIELRALLESTVEVEVLSASALNDK
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLANIAAAMEKRLSRKVKLNCKIDKSVLAGVIIRAGDMVIDGSVRGRLERLTDVLQS
HHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEFVTVARPYAKAAFDFAVEHQSLDRWQDMLAFAADVTRNEQISELLAGAVAPETLSRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH
FIAVCGEQLDEHGQNFIRVMAENGRLLVLPAVLQQFIELRALLESTVEVEVLSASALNDK
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLANIAAAMEKRLSRKVKLNCKIDKSVLAGVIIRAGDMVIDGSVRGRLERLTDVLQS
HHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA