| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
Click here to switch to the map view.
The map label for this gene is 157158491
Identifier: 157158491
GI number: 157158491
Start: 4761658
End: 4763739
Strand: Reverse
Name: 157158491
Synonym: EcE24377A_4767
Alternate gene names: NA
Gene position: 4763739-4761658 (Counterclockwise)
Preceding gene: 157155448
Following gene: 157159334
Centisome position: 95.66
GC content: 52.07
Gene sequence:
>2082_bases ATGAGTCAGCTTGATGACACCATCCTTGATGCGCTGACGCACGTTACTTTCCCAAAGGGTTTTGCACAGGCAGAGCCCGC ATGGGTTGTCACGGTAGACGGTGTTGATTACCCACTCTGGCAAACAGATGCCCTGGTAGTCGGCAGTGGTGCAGCAGGAT TACGTGCGGCAGTTGAACTTAAACGCCGCCAGCAAAATGTGCTGATCGCTACCGCCGGGTTATATATGGGGACGTCGGCA TGTTCTGGTTCCGATAAACAGACACTATTTACCGCCGCTACCGCGGGCAACGGCGACAACTTCACCAAACTGGCAGAGGC ACTGGCGAGCGGTGGGGCGATGGATCACGACACCGCTTATGTCGAAGCGGTAGGTTCTCTGCACACTCTAGGCGGGTTGC AATATCTTGGTCTGGAATTACCGGAAGATCGCTATGGCGCGATTCTTCGTTATCAAACCGACCATGACGAAGCCGGGCGT GCAACCTCGTGTGGGCCGCGTACCTCAAGGTTAATGGTGAAAGTGCTGTTGGAAGAAGTACAGCGCCTCGCCATTCCAGT GTTGACCAGTGCAACAGTGATTAAACTGCTGCATCAGCGTGACGAAAACGGCGAAGACCGCGTGGCAGGGGCAATCCTCG CGACCGGTCATCGCGCCCATAACCCATGGGGGCTGGCAATTGTGACTGCGCCCAATGTGGTACTGGCAACAGGAGGGCCT GGCGAGCTTTATCGCGACAGTGTTTATCCACATAAATGCTTCGGCTCGCTGGGGCTGGCGCTGGAGGAAGGTCTGACGCT AACCAATCTGACCGAAAGCCAGTTTGGTATAGGCACGCCGCGTAGCACGTTTCCGTGGAATTTATCCGGCACCTATGTAC AGGTGATCCCGTATATCTATTCCGTGGATGCTGAGGGTAACGAGTATAACTTCCTCGCGGATTACTATCGCACCACCCAG GAGCTGGCTTCAAACATTTTCCGTAAAGGCTATCAGTGGCCGTTCCACGCCACGCGGGTGATGGATTTTGGCTCCAGCTT GTTAGATATGGCAGTAGCGCAAGAGCAGCAATCAGGGCGTCAGGTATTTATGGATTTCAATCGCAATCCTGAAGCGGTGC CGGGTGACCTGCCGTTCTCATTAGATCGACTGGACGACGACGTTCGCGCGTATCTGGAAAATAACGACGCTCTGGCACCA TCGCCCATCGAACGGCTGCAACGAATGAATCCGCTGTCTATCTCGCTGTATAAGATGCACGGTTACGATCTCACCACACA GCCTTTGCAGTTTGCCATGAATAATCAGCATATGAATGGCGGCATTGAAGTGGATATCTGGGGACAAACCTCCCTGCCCG GCTGTTTCGCCGTGGGGGAAGTTGCTGGCACACACGGCGTCACTCGCCCTGGTGGTGCAGCATTGAATGCCGGGCAGGTT TTTGCTGTTCGTCTGGCACGTTTTATTGGTTGCACGCAAAAGCGGAATATTGATGGAGATATAGCACAGCTGGTAGCTCC TACACTGGCTTCTATAAGAGAGATCATTACTCAGGCGCACGATAACGGGACCGGGATGCCGTTGTCGGTTGTGAGAGAAA AAATTCAGGCACGAATGTCTGACCATGCGGGATTTATTTGCCATGCCGATAAAGTCCGACGCGCCACTCGCGATGCCCTG CTATTGAGCGAATTTGTCCAACGGCATGGATTGGCTATCAAACATGTGGGTGAAGTTGCCGAGCTGTTTATGTGGCGGCA TATGGCACTGACTTCTGCCGCCGTATTAACGCAATTAACGCATTATATTGACGCAGGTGGTGGTAGTCGGGGAGCACGTA TTATTCTCGACAGGGATGGAAATTCTATTCCGCAAACACGAAATGGTTTTTGTGATGCCTGGCGCTTTCGTTCAGAGCGT ACTGAGGATAAAAAAGATAAACTACTTATTCATTATTGCAACGGTATCTTTCACGTCAGAGAAACACCTGTTCGTGAGTT TCCTATTATCCGAGGTATTTGGTTTGAAAAAAACTGGCCTGGTTTTCTTAATGGGACAATTTACCAGCCACAGGATGAAT GA
Upstream 100 bases:
>100_bases TGGAGATTGAGCGCGACATTCTGCCGTATATGGCTTTCCGTCCAATTATCAAGCACCCACGCCTGATGGAAAGTAGCCTG TTTACGCCGATGGAGGATGC
Downstream 100 bases:
>100_bases TATTGCAAAGGTTAATCACTATGCGAAATATAATTAGATCTATTAATGCTCTGCTTGCAGCATTGAACATTACCATTTTG GCGATCATCGTGGCATGTGT
Product: pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: Succinate Dehydrogenase; Oxidoreductase Protein; L-Aspartate Oxidase; Pyridine Nucleotide-Disulphide Oxidoreductase; Succinate Dehydrogenase Flavoprotein Subunit
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVELKRRQQNVLIATAGLYMGTSA CSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGR ATSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQ ELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAP SPIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV FAVRLARFIGCTQKRNIDGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMSDHAGFICHADKVRRATRDAL LLSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLTHYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSER TEDKKDKLLIHYCNGIFHVRETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE
Sequences:
>Translated_693_residues MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVELKRRQQNVLIATAGLYMGTSA CSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGR ATSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQ ELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAP SPIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV FAVRLARFIGCTQKRNIDGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMSDHAGFICHADKVRRATRDAL LLSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLTHYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSER TEDKKDKLLIHYCNGIFHVRETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE >Mature_692_residues SQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVELKRRQQNVLIATAGLYMGTSAC SGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRA TSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGPG ELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQE LASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPS PIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQVF AVRLARFIGCTQKRNIDGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMSDHAGFICHADKVRRATRDALL LSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLTHYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSERT EDKKDKLLIHYCNGIFHVRETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE
Specific function: Unknown
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76092; Mature: 75961
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVEL CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAY HHHCCCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHH VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV HHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH QRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEECCC GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY CHHHHCCCCCHHHHHHHCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE SVDAEGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC QVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQRMNPLSISLYKMH EEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEE GYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV CCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHH FAVRLARFIGCTQKRNIDGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DHAGFICHADKVRRATRDALLLSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLT HCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSERTEDKKDKLLIHYCNGIFHVR HHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEECCEEEEC ETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE CCCCHHCCCEEEEEECCCCCCCCCCEEECCCCC >Mature Secondary Structure SQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVEL CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHH KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAY HHHCCCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHH VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV HHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH QRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEECCC GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY CHHHHCCCCCHHHHHHHCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE SVDAEGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC QVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQRMNPLSISLYKMH EEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEE GYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV CCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHH FAVRLARFIGCTQKRNIDGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH DHAGFICHADKVRRATRDALLLSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLT HCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSERTEDKKDKLLIHYCNGIFHVR HHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEECCEEEEC ETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE CCCCHHCCCEEEEEECCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA