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The map label for this gene is ydiF [H]

Identifier: 157155448

GI number: 157155448

Start: 4763736

End: 4765277

Strand: Reverse

Name: ydiF [H]

Synonym: EcE24377A_4768

Alternate gene names: 157155448

Gene position: 4765277-4763736 (Counterclockwise)

Preceding gene: 157155836

Following gene: 157158491

Centisome position: 95.7

GC content: 53.44

Gene sequence:

>1542_bases
ATGCGTAAGATAACAACCGCCGAGGCACTGGCGGCGCAAATTCAGGACGGCGCAACCATTGCCATTAGCGGTAACGGCGG
CGGCATGGTGGAAGCCGACCATATTCTGGCTGCTATTGAAGCGCGTTTCCTGCAAACCGGACACCCTCGCGACCTGACGC
TAATCCACTCGCTGGGTATTGGCGATCGCGACTGCAAAGGCACTAACCGTTTTGCGCACGCAGAGATGCTCAAACGCATT
ATTGCCGGGCACTTTACCTGGTCGCCCAAAATGCAGGCGCTGGTAAAAAATAACACGATTGAAGCCTACTGCTTTCCTGG
TGGCGTGATTCAGGCACTGCTACGGGAGATCGGCGCCGGACGTCCGGGGCTTTTTACCCACGTTGGGCTGGGATCGTTTG
TTGATCCACGCAATGGCGGCGGTAAGTCGAATGAATGCACTACCGACGACCTGGTAGAACTGATTGAAATCGACGGTGAA
ACCAAACTTCGTTATCGCCCTTTCAAAGTGGATTACGCGATTTTGCGTGGCACTTATGCCGATCCTCGAGGCAACGTCAG
CCTTGAAGAAGAAGCGATTGATATGGATAGCTATTCCATGGCGCTGGCAGCACACAACAGCGGCGGCAAAGTGTTCGTAC
AGGTACGCGATGTGCTGGAAGCTGGCGCGATTGAACCACGCCGGGTCAAATTACCGGGCATTCTGGTTGATGGCATCGTT
GAACACCGCGAACAACCACAAACCTATCTTGGCGGTTACGACCTGACCATCAGCGGCCAACATCGCCGTCTGAGTTCTAA
CGACGCCATTGAACTGGTTAGTCATCCGGTACGTCGCCTGATTGCCCGTCGGGCGGCACGCGAACTGGTAGCTGGCGCTT
CAACCAACTTTGGCTTTGGTATTCCTGGGGGTATTCCAGGCGTAGCGCTGCGCGAAGGCGTGCCTTACCAAAGTTTATGG
CTGAGCGTCGAGCAAGGCGTGCATAACGGTATGATGCTGGATGATGCGTTTTTCGGCTGCGCCCGCAACGCCGATGCCAT
TATTCCATCACTCGATCAATTTGAGTTCTACAGTGGCGGAGGAATCGATATCACCTTCCTCGGCATGGGAGAGATGGATC
AGTACGGTAACGTCAACGTATCCCATCTCAATGGCAATCTCATTGGTCCCGGCGGTTTTCTCGAAATTGCGCAAAACGCC
CGTAAAGTGGTGTTCTGCGGCACGTTCGACGCCAAAGGTAGCAAGATTGATGTAACGCCAGATGGCTTGCATATCACCCA
GTCAGGTCAAATCCCTAAACTGGTTACCCAGGTGGAAAAAATCACTTTTAGCGCCGCCTACGCACAGCAAAGTGGTCAGG
AAGTGTTGTATATCACTGAACGCGCAGTATTCCAGTTAACGGCAGAAGGCGTTGAATTAATTGAAATCGCGCCGGGTGTG
GAGATTGAGCGCGACATTCTGCCGTATATGGCTTTCCGTCCAATTATCAAGCACCCACGCCTGATGGAAAGTAGCCTGTT
TACGCCGATGGAGGATGCATGA

Upstream 100 bases:

>100_bases
ACTGGCCGGATTAATGTCCGCCACTCAGGATTGCCAGCAGGCGACGCGCGCCTTTGCCGAAAAAAGTAGCGTGAGCTTCC
ATAATCAATAAGGAAATTGT

Downstream 100 bases:

>100_bases
GTCAGCTTGATGACACCATCCTTGATGCGCTGACGCACGTTACTTTCCCAAAGGGTTTTGCACAGGCAGAGCCCGCATGG
GTTGTCACGGTAGACGGTGT

Product: CoA-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRDLTLIHSLGIGDRDCKGTNRFAHAEMLKRI
IAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAGRPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGE
TKLRYRPFKVDYAILRGTYADPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV
EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFGIPGGIPGVALREGVPYQSLW
LSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGGGIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNA
RKVVFCGTFDAKGSKIDVTPDGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV
EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA

Sequences:

>Translated_513_residues
MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRDLTLIHSLGIGDRDCKGTNRFAHAEMLKRI
IAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAGRPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGE
TKLRYRPFKVDYAILRGTYADPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV
EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFGIPGGIPGVALREGVPYQSLW
LSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGGGIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNA
RKVVFCGTFDAKGSKIDVTPDGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV
EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA
>Mature_513_residues
MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRDLTLIHSLGIGDRDCKGTNRFAHAEMLKRI
IAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAGRPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGE
TKLRYRPFKVDYAILRGTYADPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV
EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFGIPGGIPGVALREGVPYQSLW
LSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGGGIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNA
RKVVFCGTFDAKGSKIDVTPDGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV
EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=495, Percent_Identity=23.6363636363636, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI11545841, Length=418, Percent_Identity=25.5980861244019, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1787985, Length=508, Percent_Identity=39.3700787401575, Blast_Score=368, Evalue=1e-103,
Organism=Escherichia coli, GI1788551, Length=249, Percent_Identity=25.7028112449799, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 55618; Mature: 55618

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRDLTLIHSLGI
CCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCC
GDRDCKGTNRFAHAEMLKRIIAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAG
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC
RPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGETKLRYRPFKVDYAILRGTYA
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECEEEEEEEEECCCC
DPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV
CCCCCCEEHHHHCCCCCCEEEEEEECCCCEEEEEEEHHHHHCCCCCCEEECCCCHHHHHH
EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFG
HHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IPGGIPGVALREGVPYQSLWLSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGG
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEECCC
GIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNARKVVFCGTFDAKGSKIDVTP
CEEEEEEECCCCCCCCCEEEEEECCCEECCCHHHHHHCCCCEEEEEEEECCCCCEEECCC
DGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV
CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCC
EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA
EEHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRDLTLIHSLGI
CCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCC
GDRDCKGTNRFAHAEMLKRIIAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAG
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC
RPGLFTHVGLGSFVDPRNGGGKSNECTTDDLVELIEIDGETKLRYRPFKVDYAILRGTYA
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECEEEEEEEEECCCC
DPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV
CCCCCCEEHHHHCCCCCCEEEEEEECCCCEEEEEEEHHHHHCCCCCCEEECCCCHHHHHH
EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFG
HHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IPGGIPGVALREGVPYQSLWLSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGG
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEECCC
GIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNARKVVFCGTFDAKGSKIDVTP
CEEEEEEECCCCCCCCCEEEEEECCCEECCCHHHHHHCCCCEEEEEEEECCCCCEEECCC
DGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV
CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCC
EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA
EEHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]