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The map label for this gene is xerC [H]

Identifier: 157157376

GI number: 157157376

Start: 3373401

End: 3374459

Strand: Reverse

Name: xerC [H]

Synonym: EcE24377A_3356

Alternate gene names: 157157376

Gene position: 3374459-3373401 (Counterclockwise)

Preceding gene: 157156708

Following gene: 157157027

Centisome position: 67.77

GC content: 51.84

Gene sequence:

>1059_bases
ATGGGATCAAAGAAGGCCGGGAAACTGACCTGGGATGAACTGCTTGATGAGTATTTTTTCTCGAGAAACCTGCGTCCGGA
TACGGAATGGAGTTACCGCAAGGTTGTCCGGGGATTTGTTGATTTTATGGGCGAGGGGGTATTTCCGGCAGATGTGACCC
AGCGCGATATTCAGCGCTGGCGACGTCAGGTTCTGAAAACGCAGTCACTTTCAACATACACGTGGAATAACAAGGTGGCG
CATCTCCGGGCAATTTTTGGTTTCGGGATCAAAAAAGGGCTGCTGCCTCAGACAGAAAACCCGTTATGTGAGGCATCGGT
GGCAAAGGAGGCGAAAAAGAAGAAGACGCTTAACAAAGATCAGATGATCCAGGTTTATCTGGTTGTTCAGAAGTTTGCTG
AATATGAAACACAGCAGAGGGTACCCTGCGACCGGCGACGTAATGCCCTGTATCCGGCAAGATACTGGCTGACGGTTCTG
GATGTGTTGCGTTATACCGGGATGCGCTTTAATCAGCTGCAGCATATCAGGCTGAAGGATGTTCGTCCCGGAGAAGGGGT
GATTGAACTGCAACTGGAGGGAAGTAAAACACACCGCGAGTGGTGTGTGCCGATCGTGGAGCCACTGAAAGCCCCCCTGG
AACTTCTCCTGTCACGGGCCCGACGTCTGGGAGCCGGTCCTGATGATTTTTTGTTTGATGTCTGCCGGTTTACAGACTGC
ATTGAGCCTGATGATTATGTGTATTGTCCGGCGCGGGCCCATCAGGCGGTCAAGGGATTTTTCAGACGTCTGTCACGGGA
GTGTGGTTTTCTGGTTTCTGCCCACCGTTTCAGGCACACGCTGGCGACGATTCTGATGGAGTCACCGGAGCGAAACATGC
ATCTGGTTAAATCCATGCTGGGGCATCAGAGTATTGCGACGACCATGGAGTATGTGGATGTCAGTGTTGCATCCGCAGCC
GGAACGCTGGAGACAGCGCTGGGTCTGTATACTGACACACGAACGGTCAGTGAGGTTTGTAAAGCGGGAGAGAACAGAGA
AGAAGAGACGGAAAATTAA

Upstream 100 bases:

>100_bases
GCAGTCTGTTCAGCGGAAAAGGGCTCCCCGGAGACAGCCCGTTTATCACATTTCCGTGACGGAATGCTGCGGGGAAGGAA
TTATTTGTTATGGAGCTTTT

Downstream 100 bases:

>100_bases
CACAACTTGACAGGGATATTTCAGGTTGTAAGAATATACAGCAACGAGAACAGGGCGTCTGCTGGAACAGACACCCTGTT
TGAGGATACGATTCTGAATT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MGSKKAGKLTWDELLDEYFFSRNLRPDTEWSYRKVVRGFVDFMGEGVFPADVTQRDIQRWRRQVLKTQSLSTYTWNNKVA
HLRAIFGFGIKKGLLPQTENPLCEASVAKEAKKKKTLNKDQMIQVYLVVQKFAEYETQQRVPCDRRRNALYPARYWLTVL
DVLRYTGMRFNQLQHIRLKDVRPGEGVIELQLEGSKTHREWCVPIVEPLKAPLELLLSRARRLGAGPDDFLFDVCRFTDC
IEPDDYVYCPARAHQAVKGFFRRLSRECGFLVSAHRFRHTLATILMESPERNMHLVKSMLGHQSIATTMEYVDVSVASAA
GTLETALGLYTDTRTVSEVCKAGENREEETEN

Sequences:

>Translated_352_residues
MGSKKAGKLTWDELLDEYFFSRNLRPDTEWSYRKVVRGFVDFMGEGVFPADVTQRDIQRWRRQVLKTQSLSTYTWNNKVA
HLRAIFGFGIKKGLLPQTENPLCEASVAKEAKKKKTLNKDQMIQVYLVVQKFAEYETQQRVPCDRRRNALYPARYWLTVL
DVLRYTGMRFNQLQHIRLKDVRPGEGVIELQLEGSKTHREWCVPIVEPLKAPLELLLSRARRLGAGPDDFLFDVCRFTDC
IEPDDYVYCPARAHQAVKGFFRRLSRECGFLVSAHRFRHTLATILMESPERNMHLVKSMLGHQSIATTMEYVDVSVASAA
GTLETALGLYTDTRTVSEVCKAGENREEETEN
>Mature_351_residues
GSKKAGKLTWDELLDEYFFSRNLRPDTEWSYRKVVRGFVDFMGEGVFPADVTQRDIQRWRRQVLKTQSLSTYTWNNKVAH
LRAIFGFGIKKGLLPQTENPLCEASVAKEAKKKKTLNKDQMIQVYLVVQKFAEYETQQRVPCDRRRNALYPARYWLTVLD
VLRYTGMRFNQLQHIRLKDVRPGEGVIELQLEGSKTHREWCVPIVEPLKAPLELLLSRARRLGAGPDDFLFDVCRFTDCI
EPDDYVYCPARAHQAVKGFFRRLSRECGFLVSAHRFRHTLATILMESPERNMHLVKSMLGHQSIATTMEYVDVSVASAAG
TLETALGLYTDTRTVSEVCKAGENREEETEN

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 40637; Mature: 40506

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKKAGKLTWDELLDEYFFSRNLRPDTEWSYRKVVRGFVDFMGEGVFPADVTQRDIQRW
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RRQVLKTQSLSTYTWNNKVAHLRAIFGFGIKKGLLPQTENPLCEASVAKEAKKKKTLNKD
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
QMIQVYLVVQKFAEYETQQRVPCDRRRNALYPARYWLTVLDVLRYTGMRFNQLQHIRLKD
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
VRPGEGVIELQLEGSKTHREWCVPIVEPLKAPLELLLSRARRLGAGPDDFLFDVCRFTDC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
IEPDDYVYCPARAHQAVKGFFRRLSRECGFLVSAHRFRHTLATILMESPERNMHLVKSML
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GHQSIATTMEYVDVSVASAAGTLETALGLYTDTRTVSEVCKAGENREEETEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GSKKAGKLTWDELLDEYFFSRNLRPDTEWSYRKVVRGFVDFMGEGVFPADVTQRDIQRW
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RRQVLKTQSLSTYTWNNKVAHLRAIFGFGIKKGLLPQTENPLCEASVAKEAKKKKTLNKD
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
QMIQVYLVVQKFAEYETQQRVPCDRRRNALYPARYWLTVLDVLRYTGMRFNQLQHIRLKD
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
VRPGEGVIELQLEGSKTHREWCVPIVEPLKAPLELLLSRARRLGAGPDDFLFDVCRFTDC
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
IEPDDYVYCPARAHQAVKGFFRRLSRECGFLVSAHRFRHTLATILMESPERNMHLVKSML
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GHQSIATTMEYVDVSVASAAGTLETALGLYTDTRTVSEVCKAGENREEETEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA