| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
Click here to switch to the map view.
The map label for this gene is 157156708
Identifier: 157156708
GI number: 157156708
Start: 3374501
End: 3376156
Strand: Reverse
Name: 157156708
Synonym: EcE24377A_3357
Alternate gene names: NA
Gene position: 3376156-3374501 (Counterclockwise)
Preceding gene: 157158381
Following gene: 157157376
Centisome position: 67.8
GC content: 55.19
Gene sequence:
>1656_bases ATGCTTAATCGCCTGAAAAAACTGCTTCCCGGTAACAGCAATACCAGTAGTGCTGAGACAACCGCCCCGGAAACCGCACG CCAGCCGGAACATCTGCCGGAAGGTTTTTATATGCCCGGGACTGCAGAGGAGCTGACGTCCACACCACGCAGGAAACAGT GCCTGAAGCAGTTATGGGAAAACAGCAGTATGCCATCTGACGTGTATCAGCAGTTCTGCCTGACACCAATACAAAAACTC CTGATGGCGGCGCAGAACGTTCCCGCCGCCAGAGACTCCCGGTGGGCAGATGCCAACGGTTTTGGCGACCTGACACTGCA GTTCACCACCTATGCCGTTCGTCTGGCCAGAGGATATATGTTTCCGCCCGGTGCCACACCGGAAGAACAGGCCGCACAGT CTGGTGTATGGAATGCCGTGGTGTTCTGGTCGGCACTGTTTTATCACCTGCCACTTCTTGCACACCTGGAGGGAGAACTG GTCAGCGGAAAGTTATGGCAGCCGGGAATGTCTTCACCGGGCGAGGCATTTCGTTTTCGCTACAGACAGCAACGTCTGCA GGGGGCAGAGGCTCAGCAACTGGCAGCGGTGATGGCCGGGCAGCTGTTGCCGGAGGGGGCGACAGCCTGGCTGGCCACTG TGCCGGGAGCATTACAGAATCTGGCGGGGGCGGTCTGGCATCAGCATCCGGAGATGGCATTGATTCGTTCAGTCCTGAAA ACAGCGGCAGAAGAGGTGGAGAGTCCGCTCCTCGCATTACAGGTGACGGAAGCCGTAACAGCACCTTTGCTCCCGGAAAA CACTGTGCAGCCTGAAGACAATGTGCCATCTGACAGCCAGCCAGAAACATCAACAGAGGTCAGTGCGCCGGAAATGTCGG CGGCCGTCCCGGAGGTAGGCGAATTTACGCTGCAGCCCTCTGTTTCAGGAACCGATGAGGCCGAAGCAGTCGTCCCGGAT ACGTTGCAGTCTGCAACAGGCGCGGAGGAAAAGGCTCCGGAGGAGCAGAGTGTCCATGATGATACCGATATGCTGCTGAG TCTGTTTTCAGCAGTCAGTGATGACACTGAGCCCACGGAGGCTGATGTGGCAGAACCTGTTGAAAATAACGAGGCAGTTT CTGATGAATCAGGTTGTATAAACAGTGAACAGGCTGGCGCGGAAAGTGATCCTGCGCAAGACACGGGGATTTTTGGCTCT GTTTTATGTATCAGTGAGCCGGCTCAGGAGATAAAAAAATCACCTGAGCACTCACAGGGCCGGAACAGTACGGAAAATGT CAGGGCTTCAGGCAGTAGTGGTGAATTTGTTGAATGGCTCAGACATGGACTGGATTCGGGAGAGATCCCGGTGAATCAGC CTGATGCCAGAGTTCATCTGATTGCCGGATATGCTTTTCTGCGTGTGCCGGATGTGTTTTACCTGTATCTGAAACAGACG GGGAGTAACCACGATCGCCGTTATGTTCAGTCCGTATTTGAGCGTGCGGGACTTCACCGGGTTCGTTCCGGGGAGCGTTT TGTTCAGGCCAGGTTGTATGATTCGGCGGAACGAAAAGGGCGTTATCAACCTGTCAGCGGTTACCTGGTGAAAAGCCGCA GTCTGTTCAGCGGAAAAGGGCTCCCCGGAGACAGCCCGTTTATCACATTTCCGTGA
Upstream 100 bases:
>100_bases GCAGAAGAAGCTGGCAGAGATGAACAAAACCAGAAAGCAGCAGAGGCATCCCCGTCAGAAGAAGGGGAAAACGATGCCGT ATACGGGCAGGAGGATGAAA
Downstream 100 bases:
>100_bases CGGAATGCTGCGGGGAAGGAATTATTTGTTATGGAGCTTTTATGGGATCAAAGAAGGCCGGGAAACTGACCTGGGATGAA CTGCTTGATGAGTATTTTTT
Product: helicase/Zfx/Zfy transcription activation region domain-containing protein
Products: NA
Alternate protein names: Helicase; Relaxase-Related Protein; Helicase/Relaxase
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MLNRLKKLLPGNSNTSSAETTAPETARQPEHLPEGFYMPGTAEELTSTPRRKQCLKQLWENSSMPSDVYQQFCLTPIQKL LMAAQNVPAARDSRWADANGFGDLTLQFTTYAVRLARGYMFPPGATPEEQAAQSGVWNAVVFWSALFYHLPLLAHLEGEL VSGKLWQPGMSSPGEAFRFRYRQQRLQGAEAQQLAAVMAGQLLPEGATAWLATVPGALQNLAGAVWHQHPEMALIRSVLK TAAEEVESPLLALQVTEAVTAPLLPENTVQPEDNVPSDSQPETSTEVSAPEMSAAVPEVGEFTLQPSVSGTDEAEAVVPD TLQSATGAEEKAPEEQSVHDDTDMLLSLFSAVSDDTEPTEADVAEPVENNEAVSDESGCINSEQAGAESDPAQDTGIFGS VLCISEPAQEIKKSPEHSQGRNSTENVRASGSSGEFVEWLRHGLDSGEIPVNQPDARVHLIAGYAFLRVPDVFYLYLKQT GSNHDRRYVQSVFERAGLHRVRSGERFVQARLYDSAERKGRYQPVSGYLVKSRSLFSGKGLPGDSPFITFP
Sequences:
>Translated_551_residues MLNRLKKLLPGNSNTSSAETTAPETARQPEHLPEGFYMPGTAEELTSTPRRKQCLKQLWENSSMPSDVYQQFCLTPIQKL LMAAQNVPAARDSRWADANGFGDLTLQFTTYAVRLARGYMFPPGATPEEQAAQSGVWNAVVFWSALFYHLPLLAHLEGEL VSGKLWQPGMSSPGEAFRFRYRQQRLQGAEAQQLAAVMAGQLLPEGATAWLATVPGALQNLAGAVWHQHPEMALIRSVLK TAAEEVESPLLALQVTEAVTAPLLPENTVQPEDNVPSDSQPETSTEVSAPEMSAAVPEVGEFTLQPSVSGTDEAEAVVPD TLQSATGAEEKAPEEQSVHDDTDMLLSLFSAVSDDTEPTEADVAEPVENNEAVSDESGCINSEQAGAESDPAQDTGIFGS VLCISEPAQEIKKSPEHSQGRNSTENVRASGSSGEFVEWLRHGLDSGEIPVNQPDARVHLIAGYAFLRVPDVFYLYLKQT GSNHDRRYVQSVFERAGLHRVRSGERFVQARLYDSAERKGRYQPVSGYLVKSRSLFSGKGLPGDSPFITFP >Mature_551_residues MLNRLKKLLPGNSNTSSAETTAPETARQPEHLPEGFYMPGTAEELTSTPRRKQCLKQLWENSSMPSDVYQQFCLTPIQKL LMAAQNVPAARDSRWADANGFGDLTLQFTTYAVRLARGYMFPPGATPEEQAAQSGVWNAVVFWSALFYHLPLLAHLEGEL VSGKLWQPGMSSPGEAFRFRYRQQRLQGAEAQQLAAVMAGQLLPEGATAWLATVPGALQNLAGAVWHQHPEMALIRSVLK TAAEEVESPLLALQVTEAVTAPLLPENTVQPEDNVPSDSQPETSTEVSAPEMSAAVPEVGEFTLQPSVSGTDEAEAVVPD TLQSATGAEEKAPEEQSVHDDTDMLLSLFSAVSDDTEPTEADVAEPVENNEAVSDESGCINSEQAGAESDPAQDTGIFGS VLCISEPAQEIKKSPEHSQGRNSTENVRASGSSGEFVEWLRHGLDSGEIPVNQPDARVHLIAGYAFLRVPDVFYLYLKQT GSNHDRRYVQSVFERAGLHRVRSGERFVQARLYDSAERKGRYQPVSGYLVKSRSLFSGKGLPGDSPFITFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59985; Mature: 59985
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRLKKLLPGNSNTSSAETTAPETARQPEHLPEGFYMPGTAEELTSTPRRKQCLKQLWE CHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHC NSSMPSDVYQQFCLTPIQKLLMAAQNVPAARDSRWADANGFGDLTLQFTTYAVRLARGYM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCC FPPGATPEEQAAQSGVWNAVVFWSALFYHLPLLAHLEGELVSGKLWQPGMSSPGEAFRFR CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHH YRQQRLQGAEAQQLAAVMAGQLLPEGATAWLATVPGALQNLAGAVWHQHPEMALIRSVLK HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH TAAEEVESPLLALQVTEAVTAPLLPENTVQPEDNVPSDSQPETSTEVSAPEMSAAVPEVG HHHHHHHCCHHEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC EFTLQPSVSGTDEAEAVVPDTLQSATGAEEKAPEEQSVHDDTDMLLSLFSAVSDDTEPTE CEEECCCCCCCCCCCHHCCHHHHHHCCCHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCH ADVAEPVENNEAVSDESGCINSEQAGAESDPAQDTGIFGSVLCISEPAQEIKKSPEHSQG HHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHECCHHHHHHHCCCCCCCC RNSTENVRASGSSGEFVEWLRHGLDSGEIPVNQPDARVHLIAGYAFLRVPDVFYLYLKQT CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHC GSNHDRRYVQSVFERAGLHRVRSGERFVQARLYDSAERKGRYQPVSGYLVKSRSLFSGKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCCCC LPGDSPFITFP CCCCCCEEECC >Mature Secondary Structure MLNRLKKLLPGNSNTSSAETTAPETARQPEHLPEGFYMPGTAEELTSTPRRKQCLKQLWE CHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHC NSSMPSDVYQQFCLTPIQKLLMAAQNVPAARDSRWADANGFGDLTLQFTTYAVRLARGYM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCC FPPGATPEEQAAQSGVWNAVVFWSALFYHLPLLAHLEGELVSGKLWQPGMSSPGEAFRFR CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHH YRQQRLQGAEAQQLAAVMAGQLLPEGATAWLATVPGALQNLAGAVWHQHPEMALIRSVLK HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH TAAEEVESPLLALQVTEAVTAPLLPENTVQPEDNVPSDSQPETSTEVSAPEMSAAVPEVG HHHHHHHCCHHEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC EFTLQPSVSGTDEAEAVVPDTLQSATGAEEKAPEEQSVHDDTDMLLSLFSAVSDDTEPTE CEEECCCCCCCCCCCHHCCHHHHHHCCCHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCH ADVAEPVENNEAVSDESGCINSEQAGAESDPAQDTGIFGSVLCISEPAQEIKKSPEHSQG HHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHECCHHHHHHHCCCCCCCC RNSTENVRASGSSGEFVEWLRHGLDSGEIPVNQPDARVHLIAGYAFLRVPDVFYLYLKQT CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHC GSNHDRRYVQSVFERAGLHRVRSGERFVQARLYDSAERKGRYQPVSGYLVKSRSLFSGKG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCCCC LPGDSPFITFP CCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA