| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157161459
Identifier: 157161459
GI number: 157161459
Start: 2076052
End: 2077626
Strand: Reverse
Name: 157161459
Synonym: EcHS_A2092
Alternate gene names: NA
Gene position: 2077626-2076052 (Counterclockwise)
Preceding gene: 157161460
Following gene: 157161458
Centisome position: 44.74
GC content: 54.48
Gene sequence:
>1575_bases ATGTTGACGGGCGGTAGCCGGGTGCCATATGACGCCGGGGATTCCTTCAGCGATCAACTGGCGAACTGGCAGCCCGCACT ATGGTCACCGGATAACGAAATTAATATCTACCGTGACCGTATAGTTTCCCGTGCGCGGGATCTGGTCCGAAATGATGGAT GGGCCAATGGTGCCATAACTCGCCTGCTTGATAATGCGGTCGGCGCCAATTTCCGTCCGATCATGAAGCCTGACTATCGT GTATTACGGATGATGACAGGTAATAAAAGTTTTGACGCAGTATGGGCGGAAGAGTACGGAAAAGCACTCGCTTCCCACTG GAGAACCTGGGCATACGACACAGGCCGTTATTGTGACGTTGAGCGCAAGCTAACCGTTCCACAAATGTTGCGTCTGGCCT TTCGCCACAAGCTGATTGATGGCGATGCCCTGATGGTGCTTCAGTATCGCACCGATCGCCTTGGACCAGGTAAGGGGCGT TATGCCACGACGGTGCAGGTTGTTGATCCCGACAGACTCAGTAACCCGCAGCAGAATTTTGATATGCCGAATATCCGCGG CGGCGTTGAAATTGATGCTGACGGCGCACCTGTGGCTTATCACATACGTGAAGCACATATCGGTGACTGGTGGAGTGGCG CCAAAACAATGACATGGCGACGAATCCCGCGCGAAACCGCATGGGGGCGCCCGCACGTTGTGCACGACTTTGACCATGAG CGTGGAGCTCAGCATCGGGGGAATGGCATTCTGACTCCAGTAGTGCAACGTCTGAAGATGCTGGTGAAGTACGACCAGAG CGAGCTGGAAGCAGCAATTCTGAATGCTATCTTCGCCGCGTATATTGAGTCTCCATACGATCCCGAAATGATCCAGTCCG CGCTGGGGGAAAACTTCGAAGAGGGATTGGGAGCATACCAGGATGGTCGTGCAGAGTTTCATAATGATCGCCGTTTGACG CTGCAGAATGGCGCCCGTATGCCGATCCTTTATCCAGGGGAGAGAATAACAACGGTCAACGCTGCCCGCCCTTACAGCAA CTTTGAGGTTTTCGAGTCTGCAGTATTGCGTAATTTCTCATCCGGTACGGGGTTATCTCCTCAGCAGGTTACACAGGACT GGTCTGATGTGAATTACAGCTCTGCGCGATCTTCCTTGCTGGAGGCATGGAAAACGCTCACCCGCCGACGTGATGATTTC TCCATGGGTACCGCTCAGCCGCTTCTGACGGCCTTTGTGGAGGAAGTTCACGATAACGAGGATTTACCTCTACCTAATGA TGCCCCTGATTTTGTTGATGCCCGGGCAGCGTATTCCCGTGCGCGCTGGATGGGGCCGGGGCGAGGATGGGTTGATCCGG TGGCAGAGAAAAAAGGCGCCATTCTCGGCCTCGATGCCGGCCTTTCCACTCTCGAAATTGAAGTGGGTGAAAACGTGGGT GAGGACTGGGAAGAGATACTTGATCAGCGCCAGCGGGAAATTGAGTCCTGCCTGAAGCGCGGACTTCCATTACCTAGCTG GGCGCAGGCGGACCAGTTCGCCAGCCAGACAATTACCGATCCGGAGGAAAAGTGA
Upstream 100 bases:
>100_bases TTGTCGCCCGGCCACGGAAGCCAGTGAGGTTCAGATTCTGATGAATAAAGTGCAAATCCTTGGTCCTGACGGGAGACCTT ATCAGGCACCAAAACCCAGC
Downstream 100 bases:
>100_bases ATCTACCTCATCTGGCCCAGCGCCTTTTTAATACACCGCTGGCGCTGCACCCAAGTAAAGCTGAAGTCATCATGGCATCC GTTATGGACCGGTTTGGCAT
Product: lambda family phage portal protein
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Bacteriophage Capsid Protein; Portal Protein; Phage Portal Protein Lambda; Portal Protein Lambda Family; Phage Portal Protein Lambda Family Protein; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Lytic Transglycosylase Catalytic; Bacteriophage Capsid Protein; Capsid Protein Of Prophage; Prophage; Head-Tail Preconnector Protein Phage Origin; Portal Protein GPB Of Phage Lambda; Phage Capsid Protein; Head Portal Protein; Phage Portal Protein Gp; Phage-Related Portal Protein
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MLTGGSRVPYDAGDSFSDQLANWQPALWSPDNEINIYRDRIVSRARDLVRNDGWANGAITRLLDNAVGANFRPIMKPDYR VLRMMTGNKSFDAVWAEEYGKALASHWRTWAYDTGRYCDVERKLTVPQMLRLAFRHKLIDGDALMVLQYRTDRLGPGKGR YATTVQVVDPDRLSNPQQNFDMPNIRGGVEIDADGAPVAYHIREAHIGDWWSGAKTMTWRRIPRETAWGRPHVVHDFDHE RGAQHRGNGILTPVVQRLKMLVKYDQSELEAAILNAIFAAYIESPYDPEMIQSALGENFEEGLGAYQDGRAEFHNDRRLT LQNGARMPILYPGERITTVNAARPYSNFEVFESAVLRNFSSGTGLSPQQVTQDWSDVNYSSARSSLLEAWKTLTRRRDDF SMGTAQPLLTAFVEEVHDNEDLPLPNDAPDFVDARAAYSRARWMGPGRGWVDPVAEKKGAILGLDAGLSTLEIEVGENVG EDWEEILDQRQREIESCLKRGLPLPSWAQADQFASQTITDPEEK
Sequences:
>Translated_524_residues MLTGGSRVPYDAGDSFSDQLANWQPALWSPDNEINIYRDRIVSRARDLVRNDGWANGAITRLLDNAVGANFRPIMKPDYR VLRMMTGNKSFDAVWAEEYGKALASHWRTWAYDTGRYCDVERKLTVPQMLRLAFRHKLIDGDALMVLQYRTDRLGPGKGR YATTVQVVDPDRLSNPQQNFDMPNIRGGVEIDADGAPVAYHIREAHIGDWWSGAKTMTWRRIPRETAWGRPHVVHDFDHE RGAQHRGNGILTPVVQRLKMLVKYDQSELEAAILNAIFAAYIESPYDPEMIQSALGENFEEGLGAYQDGRAEFHNDRRLT LQNGARMPILYPGERITTVNAARPYSNFEVFESAVLRNFSSGTGLSPQQVTQDWSDVNYSSARSSLLEAWKTLTRRRDDF SMGTAQPLLTAFVEEVHDNEDLPLPNDAPDFVDARAAYSRARWMGPGRGWVDPVAEKKGAILGLDAGLSTLEIEVGENVG EDWEEILDQRQREIESCLKRGLPLPSWAQADQFASQTITDPEEK >Mature_524_residues MLTGGSRVPYDAGDSFSDQLANWQPALWSPDNEINIYRDRIVSRARDLVRNDGWANGAITRLLDNAVGANFRPIMKPDYR VLRMMTGNKSFDAVWAEEYGKALASHWRTWAYDTGRYCDVERKLTVPQMLRLAFRHKLIDGDALMVLQYRTDRLGPGKGR YATTVQVVDPDRLSNPQQNFDMPNIRGGVEIDADGAPVAYHIREAHIGDWWSGAKTMTWRRIPRETAWGRPHVVHDFDHE RGAQHRGNGILTPVVQRLKMLVKYDQSELEAAILNAIFAAYIESPYDPEMIQSALGENFEEGLGAYQDGRAEFHNDRRLT LQNGARMPILYPGERITTVNAARPYSNFEVFESAVLRNFSSGTGLSPQQVTQDWSDVNYSSARSSLLEAWKTLTRRRDDF SMGTAQPLLTAFVEEVHDNEDLPLPNDAPDFVDARAAYSRARWMGPGRGWVDPVAEKKGAILGLDAGLSTLEIEVGENVG EDWEEILDQRQREIESCLKRGLPLPSWAQADQFASQTITDPEEK
Specific function: Unknown
COG id: COG5511
COG function: function code R; Bacteriophage capsid protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59216; Mature: 59216
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGGSRVPYDAGDSFSDQLANWQPALWSPDNEINIYRDRIVSRARDLVRNDGWANGAIT CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH RLLDNAVGANFRPIMKPDYRVLRMMTGNKSFDAVWAEEYGKALASHWRTWAYDTGRYCDV HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECC ERKLTVPQMLRLAFRHKLIDGDALMVLQYRTDRLGPGKGRYATTVQVVDPDRLSNPQQNF HHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHCCCCHHCC DMPNIRGGVEIDADGAPVAYHIREAHIGDWWSGAKTMTWRRIPRETAWGRPHVVHDFDHE CCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCHH RGAQHRGNGILTPVVQRLKMLVKYDQSELEAAILNAIFAAYIESPYDPEMIQSALGENFE CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH EGLGAYQDGRAEFHNDRRLTLQNGARMPILYPGERITTVNAARPYSNFEVFESAVLRNFS HHCCCCCCCCHHHCCCCEEEECCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHCC SGTGLSPQQVTQDWSDVNYSSARSSLLEAWKTLTRRRDDFSMGTAQPLLTAFVEEVHDNE CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC DLPLPNDAPDFVDARAAYSRARWMGPGRGWVDPVAEKKGAILGLDAGLSTLEIEVGENVG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCEEEEEEECCCCC EDWEEILDQRQREIESCLKRGLPLPSWAQADQFASQTITDPEEK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLTGGSRVPYDAGDSFSDQLANWQPALWSPDNEINIYRDRIVSRARDLVRNDGWANGAIT CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH RLLDNAVGANFRPIMKPDYRVLRMMTGNKSFDAVWAEEYGKALASHWRTWAYDTGRYCDV HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECC ERKLTVPQMLRLAFRHKLIDGDALMVLQYRTDRLGPGKGRYATTVQVVDPDRLSNPQQNF HHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHCCCCHHCC DMPNIRGGVEIDADGAPVAYHIREAHIGDWWSGAKTMTWRRIPRETAWGRPHVVHDFDHE CCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCHH RGAQHRGNGILTPVVQRLKMLVKYDQSELEAAILNAIFAAYIESPYDPEMIQSALGENFE CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH EGLGAYQDGRAEFHNDRRLTLQNGARMPILYPGERITTVNAARPYSNFEVFESAVLRNFS HHCCCCCCCCHHHCCCCEEEECCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHCC SGTGLSPQQVTQDWSDVNYSSARSSLLEAWKTLTRRRDDFSMGTAQPLLTAFVEEVHDNE CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC DLPLPNDAPDFVDARAAYSRARWMGPGRGWVDPVAEKKGAILGLDAGLSTLEIEVGENVG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCEEEEEEECCCCC EDWEEILDQRQREIESCLKRGLPLPSWAQADQFASQTITDPEEK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA