Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is bgxA [H]

Identifier: 156978314

GI number: 156978314

Start: 2191918

End: 2192499

Strand: Reverse

Name: bgxA [H]

Synonym: VIBHAR_07121

Alternate gene names: 156978314

Gene position: 2192499-2191918 (Counterclockwise)

Preceding gene: 156978316

Following gene: 156978313

Centisome position: 99.48

GC content: 50.17

Gene sequence:

>582_bases
ATGAAACGTCTTACCCAACTCACTCCTATCGCAGTGGCGCTTGTTCTCACAGGGTGTAATTCATCCGACGATGACAACAG
CTATGTTCAACCAGAAGTCTTCTCTCGAGTACACGACGTGCTCAGCGTCGACGGTTATCAATTTAGAGATTCCAATGGCA
ACGGAACGTTAGAGCCGTTTGAAGAATGGCGTCTCACACCAGAAGAGCGCGCCGCCGATCTTGTTAGCCGAATGACGCTT
GAAGAGAAAGCCGGCATGATGCTTATCGACACACTAAATTCCGGTGAAGGCGGTGTCGTCACAAGCAAAGGTCAAGACAT
GATTGCCGATGCTCAGATGACCCGTTTTATCTTCCGTAACAATGTGGTGGAAACCCCAGAAAACGCACCAAACTGTGATA
GCGGGCGCTCTGGCTGCCAGATTTCACCCAAAGAAGCAGCGACTTTCATGAACAGTGTTCAAGAGCTGCGAGAGAAAACC
CGCATGGGTATCCCTGCTCTATTTAAGTCCAATGCACGCAACCACATCGACCCATCCGCAAAAGCGGGTATCAACGTCTC
TTCTGGTGCATTCTCGGCTTGA

Upstream 100 bases:

>100_bases
GAGTCAGTGTAATTTTCATGATGCGTAGCATGATCCTGATTCTATTGAAAATCAAGCAACTTCAATGATCACGGGTATAT
ACCAACATTAGGACAGCGAC

Downstream 100 bases:

>100_bases
CCAAAAGAAGCAGGACTTGCAGCCACTCGCGATATGGCGCTGATTGAAGAGTTTGCGGGTATCATGAATGAAGAATGGTC
ATCGATTGGTCTACGCAGTA

Product: beta-glucosidase

Products: NA

Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL
EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT
RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA

Sequences:

>Translated_193_residues
MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL
EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT
RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA
>Mature_193_residues
MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL
EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT
RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA

Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002772
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]

EC number: =3.2.1.21; =3.2.1.37 [H]

Molecular weight: Translated: 21037; Mature: 21037

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCH
EEWRLTPEERAADLVSRMTLEEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRN
HHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHC
NVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKTRMGIPALFKSNARNHIDPSA
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCH
KAGINVSSGAFSA
HCCCCCCCCCCCC
>Mature Secondary Structure
MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCH
EEWRLTPEERAADLVSRMTLEEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRN
HHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHC
NVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKTRMGIPALFKSNARNHIDPSA
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCH
KAGINVSSGAFSA
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7891660 [H]