| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is bgxA [H]
Identifier: 156978314
GI number: 156978314
Start: 2191918
End: 2192499
Strand: Reverse
Name: bgxA [H]
Synonym: VIBHAR_07121
Alternate gene names: 156978314
Gene position: 2192499-2191918 (Counterclockwise)
Preceding gene: 156978316
Following gene: 156978313
Centisome position: 99.48
GC content: 50.17
Gene sequence:
>582_bases ATGAAACGTCTTACCCAACTCACTCCTATCGCAGTGGCGCTTGTTCTCACAGGGTGTAATTCATCCGACGATGACAACAG CTATGTTCAACCAGAAGTCTTCTCTCGAGTACACGACGTGCTCAGCGTCGACGGTTATCAATTTAGAGATTCCAATGGCA ACGGAACGTTAGAGCCGTTTGAAGAATGGCGTCTCACACCAGAAGAGCGCGCCGCCGATCTTGTTAGCCGAATGACGCTT GAAGAGAAAGCCGGCATGATGCTTATCGACACACTAAATTCCGGTGAAGGCGGTGTCGTCACAAGCAAAGGTCAAGACAT GATTGCCGATGCTCAGATGACCCGTTTTATCTTCCGTAACAATGTGGTGGAAACCCCAGAAAACGCACCAAACTGTGATA GCGGGCGCTCTGGCTGCCAGATTTCACCCAAAGAAGCAGCGACTTTCATGAACAGTGTTCAAGAGCTGCGAGAGAAAACC CGCATGGGTATCCCTGCTCTATTTAAGTCCAATGCACGCAACCACATCGACCCATCCGCAAAAGCGGGTATCAACGTCTC TTCTGGTGCATTCTCGGCTTGA
Upstream 100 bases:
>100_bases GAGTCAGTGTAATTTTCATGATGCGTAGCATGATCCTGATTCTATTGAAAATCAAGCAACTTCAATGATCACGGGTATAT ACCAACATTAGGACAGCGAC
Downstream 100 bases:
>100_bases CCAAAAGAAGCAGGACTTGCAGCCACTCGCGATATGGCGCTGATTGAAGAGTTTGCGGGTATCATGAATGAAGAATGGTC ATCGATTGGTCTACGCAGTA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA
Sequences:
>Translated_193_residues MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA >Mature_193_residues MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPFEEWRLTPEERAADLVSRMTL EEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRNNVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKT RMGIPALFKSNARNHIDPSAKAGINVSSGAFSA
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 21037; Mature: 21037
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCH EEWRLTPEERAADLVSRMTLEEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRN HHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHC NVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKTRMGIPALFKSNARNHIDPSA CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCH KAGINVSSGAFSA HCCCCCCCCCCCC >Mature Secondary Structure MKRLTQLTPIAVALVLTGCNSSDDDNSYVQPEVFSRVHDVLSVDGYQFRDSNGNGTLEPF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCH EEWRLTPEERAADLVSRMTLEEKAGMMLIDTLNSGEGGVVTSKGQDMIADAQMTRFIFRN HHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHC NVVETPENAPNCDSGRSGCQISPKEAATFMNSVQELREKTRMGIPALFKSNARNHIDPSA CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCH KAGINVSSGAFSA HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]