| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is bgxA [H]
Identifier: 156978313
GI number: 156978313
Start: 2190448
End: 2191884
Strand: Reverse
Name: bgxA [H]
Synonym: VIBHAR_07120
Alternate gene names: 156978313
Gene position: 2191884-2190448 (Counterclockwise)
Preceding gene: 156978314
Following gene: 156978312
Centisome position: 99.45
GC content: 49.41
Gene sequence:
>1437_bases ATGGCGCTGATTGAAGAGTTTGCGGGTATCATGAATGAAGAATGGTCATCGATTGGTCTACGCAGTATGTATGGCTACAT GATGGACTTGGCGACAGAGCCTCGTTGGTACCGTGTGCATGAAACCTTTACAGAAGACGCGGATCTTGCGGCAGATATCA TGCGCTCTTTGATCAACGGTCTACAAGGTGATGGAGCTATTGACCAAGACAGCATCGCCCTTACGATCAAACACTTCCCT GGTGGTGGTCCTCAAGAAAACGGCGGTGACCCTCACTACGACTTTGGGCAAAACCAAGTCTATCCAAAAGACAACTTTGA CTACCACCTGATCCCGTTTATTGCCGCAATTGATGCTGGTGCGTCTTCGATCATGCCTTATTACGGCATACCAGTAGATC AAAAGTGGATGCCAAATGATGTGGGTATGTCCTTCTCTGAAGGCATTGTGACCGATCTGCTGCGTGGTGAGCTGGGCTAT ACTGGCAACGTCAACTCCGATACCGGTATCATCGGCGACCGAGCATGGGGTGTAGAAGATAAAACCATCGACGAACAAGT TGCGATGGTAATCGAAGCTGGCGTCGACGTTCTCTCTGGCTTGAACGATAAAGACGTCATCGTCAATCTGGTCAACAAAG GACTGATTGACGAAGAGCGCGTCGATCTTTCAGTGACTCGCCTCGTCAAAGAGCAGTTCCAACCGGGCTTGTTTGAAAAC ACGTATGTGGACGTCGATAAAGCCCAAGAAATCTTAGGCAACGCCGAACATCAAGAACGTGCAGATTACGCTCAGAAGAA ATCTGTGGTTCTGCTGCAAAACACAGACAAGACACTGCCGCTCGCCAAACCAAACGCCGACAAAGCAGTTTCGCTCTACG TGATGGGTATGGATGAAACCATCGCTGGCGACGAGCGCTATGGCTTTGATGTGACCTCTGGTGATTATGAAGATGGTGAA GCTCGCCCGCCAGTGCCAGCAGGCACCGATTACGCCGTTATTCGTGTGCGTGTTTCCAATGAAGGTGCGAATCCTGAGCT TATCTTTGGCGGCGCAAACCCAGATGAACTCGACCTGCTGGCATTCAGCCAAATGGCAACCGCTGCATCTTGGAAAATTG AGCCAAGCCTGACCGATATCCAAGCTGTCATGAATGAAATTGGCGCAGAGAATACCGTGCTTTCAATTAACTTCCGTCAA CCGTTTGTATTGGATGACGCAAGTAACATGAAAAAGTCGGGCGCAATCTTAGCCACCTTCGGTGTATCAGACAGCAACTT AATGGAAGTCCTTTCAGGCAACTTTGCTCCTCAAGGCAAGCTTCCATTTGCACTGGCAAACAGCGCGCAAGCGATTTTGA ACCAGCACTCTGACTACCCAGGTTATGACGAAGCAGACACCTTGTACGAATTCGGTCACGGGCTAAGTTACGAATAA
Upstream 100 bases:
>100_bases ACGCAACCACATCGACCCATCCGCAAAAGCGGGTATCAACGTCTCTTCTGGTGCATTCTCGGCTTGACCAAAAGAAGCAG GACTTGCAGCCACTCGCGAT
Downstream 100 bases:
>100_bases CCTTTTACCCACCTAACAAGGCAGTGTCTCGGCGCTGCCTTTGTTGGATCTACTTTAGGAATAAACCATGGAACACATAC TGCAGTTAGACTGGGTTGAC
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MALIEEFAGIMNEEWSSIGLRSMYGYMMDLATEPRWYRVHETFTEDADLAADIMRSLINGLQGDGAIDQDSIALTIKHFP GGGPQENGGDPHYDFGQNQVYPKDNFDYHLIPFIAAIDAGASSIMPYYGIPVDQKWMPNDVGMSFSEGIVTDLLRGELGY TGNVNSDTGIIGDRAWGVEDKTIDEQVAMVIEAGVDVLSGLNDKDVIVNLVNKGLIDEERVDLSVTRLVKEQFQPGLFEN TYVDVDKAQEILGNAEHQERADYAQKKSVVLLQNTDKTLPLAKPNADKAVSLYVMGMDETIAGDERYGFDVTSGDYEDGE ARPPVPAGTDYAVIRVRVSNEGANPELIFGGANPDELDLLAFSQMATAASWKIEPSLTDIQAVMNEIGAENTVLSINFRQ PFVLDDASNMKKSGAILATFGVSDSNLMEVLSGNFAPQGKLPFALANSAQAILNQHSDYPGYDEADTLYEFGHGLSYE
Sequences:
>Translated_478_residues MALIEEFAGIMNEEWSSIGLRSMYGYMMDLATEPRWYRVHETFTEDADLAADIMRSLINGLQGDGAIDQDSIALTIKHFP GGGPQENGGDPHYDFGQNQVYPKDNFDYHLIPFIAAIDAGASSIMPYYGIPVDQKWMPNDVGMSFSEGIVTDLLRGELGY TGNVNSDTGIIGDRAWGVEDKTIDEQVAMVIEAGVDVLSGLNDKDVIVNLVNKGLIDEERVDLSVTRLVKEQFQPGLFEN TYVDVDKAQEILGNAEHQERADYAQKKSVVLLQNTDKTLPLAKPNADKAVSLYVMGMDETIAGDERYGFDVTSGDYEDGE ARPPVPAGTDYAVIRVRVSNEGANPELIFGGANPDELDLLAFSQMATAASWKIEPSLTDIQAVMNEIGAENTVLSINFRQ PFVLDDASNMKKSGAILATFGVSDSNLMEVLSGNFAPQGKLPFALANSAQAILNQHSDYPGYDEADTLYEFGHGLSYE >Mature_477_residues ALIEEFAGIMNEEWSSIGLRSMYGYMMDLATEPRWYRVHETFTEDADLAADIMRSLINGLQGDGAIDQDSIALTIKHFPG GGPQENGGDPHYDFGQNQVYPKDNFDYHLIPFIAAIDAGASSIMPYYGIPVDQKWMPNDVGMSFSEGIVTDLLRGELGYT GNVNSDTGIIGDRAWGVEDKTIDEQVAMVIEAGVDVLSGLNDKDVIVNLVNKGLIDEERVDLSVTRLVKEQFQPGLFENT YVDVDKAQEILGNAEHQERADYAQKKSVVLLQNTDKTLPLAKPNADKAVSLYVMGMDETIAGDERYGFDVTSGDYEDGEA RPPVPAGTDYAVIRVRVSNEGANPELIFGGANPDELDLLAFSQMATAASWKIEPSLTDIQAVMNEIGAENTVLSINFRQP FVLDDASNMKKSGAILATFGVSDSNLMEVLSGNFAPQGKLPFALANSAQAILNQHSDYPGYDEADTLYEFGHGLSYE
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=276, Percent_Identity=24.6376811594203, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 52222; Mature: 52090
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIEEFAGIMNEEWSSIGLRSMYGYMMDLATEPRWYRVHETFTEDADLAADIMRSLING CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHH LQGDGAIDQDSIALTIKHFPGGGPQENGGDPHYDFGQNQVYPKDNFDYHLIPFIAAIDAG CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC ASSIMPYYGIPVDQKWMPNDVGMSFSEGIVTDLLRGELGYTGNVNSDTGIIGDRAWGVED HHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KTIDEQVAMVIEAGVDVLSGLNDKDVIVNLVNKGLIDEERVDLSVTRLVKEQFQPGLFEN CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC TYVDVDKAQEILGNAEHQERADYAQKKSVVLLQNTDKTLPLAKPNADKAVSLYVMGMDET CEECHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCC IAGDERYGFDVTSGDYEDGEARPPVPAGTDYAVIRVRVSNEGANPELIFGGANPDELDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHH AFSQMATAASWKIEPSLTDIQAVMNEIGAENTVLSINFRQPFVLDDASNMKKSGAILATF HHHHHHHHHCEEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCHHCHHHCCCEEEEE GVSDSNLMEVLSGNFAPQGKLPFALANSAQAILNQHSDYPGYDEADTLYEFGHGLSYE CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure ALIEEFAGIMNEEWSSIGLRSMYGYMMDLATEPRWYRVHETFTEDADLAADIMRSLING CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHH LQGDGAIDQDSIALTIKHFPGGGPQENGGDPHYDFGQNQVYPKDNFDYHLIPFIAAIDAG CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCC ASSIMPYYGIPVDQKWMPNDVGMSFSEGIVTDLLRGELGYTGNVNSDTGIIGDRAWGVED HHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KTIDEQVAMVIEAGVDVLSGLNDKDVIVNLVNKGLIDEERVDLSVTRLVKEQFQPGLFEN CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC TYVDVDKAQEILGNAEHQERADYAQKKSVVLLQNTDKTLPLAKPNADKAVSLYVMGMDET CEECHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCC IAGDERYGFDVTSGDYEDGEARPPVPAGTDYAVIRVRVSNEGANPELIFGGANPDELDLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHH AFSQMATAASWKIEPSLTDIQAVMNEIGAENTVLSINFRQPFVLDDASNMKKSGAILATF HHHHHHHHHCEEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCHHCHHHCCCEEEEE GVSDSNLMEVLSGNFAPQGKLPFALANSAQAILNQHSDYPGYDEADTLYEFGHGLSYE CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]