| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978228
Identifier: 156978228
GI number: 156978228
Start: 2108797
End: 2109807
Strand: Direct
Name: 156978228
Synonym: VIBHAR_07033
Alternate gene names: NA
Gene position: 2108797-2109807 (Clockwise)
Preceding gene: 156978227
Following gene: 156978229
Centisome position: 95.68
GC content: 47.87
Gene sequence:
>1011_bases ATGTGGACCTTCGAAAGCCTGTTTCAAAGTCGTTCTGAGCGCAATGAAGCACTGCGTGTCGCCCTTACTGTGACAATTTG TATGGTGCTAGGCAAACTGCTGAACCTTGATTCTCCAGTTTATCTGGCGCTGTACCCAACCATCATCATGACCAAGAACA AAGACTACTCTTGGCTTGGTCTGCTTCGCACCTTGCTACCTACGTTATTAGCAGCAAGTACAGCATTGGTGGTAACTGAA GTGTTTTCACAGCATCCGTTTGTGGTGTGGACCATTAGCTTGTTCTTCTTCGACTTTATGCGCCGCAGAGCGACCACGCC GCCGAAGAAAGGTCAGATGCTAATGCCAACCTTTAACTGGATTTTGATTGTGGTGTTTGCTCAGCACACCACCATGGACA TGCCGATGCGCATTCATGAAATCTTGCTATCGATGCTGATTACCATGGTCGTCGCAAAAACCATGGTAGCTCTATTCCCT GTTGAACGTGGCGGCAAACCACCAGCATTTGAAGAAGAGCCTGTTACGTTTGAGAACCGAGCGATTTCACTCGCGTTGAT TGGTCTTGGTGTGGCGTTCTTAATGATTGTCGACATCATCTCAGCAACGTTTTGTTTGGTGCCTGTGATTGCCGCAGCAA CGCAAACCACACACAAAAGCTTTATCGACGTGGTTGACCGCCGTTTTCAAACTCAAGTGGGCGGCTGTGCATTAGCTTCA GTGTTCACCTTTTTGATGGCTGGGCATCAGTCCACGTTCGGTTACTACACCATCGTATTAGGTCTGCTTGCCTTTATGAT CACCGCATCAATGGCAAAAGCGAAAGGTCCAGCCAAAGACGTTCATGCTGATGCGTTATTAGCGACCATGCTGCCGATTC AACTCTACATGACCAGTAAAGAGTTAGGCTTGGAAAGCACTTTCCTTCGAGCTTGGGAGCTTACCGTGACTTTGTTTGTA CTGTGGGCGTTATACCATTTCACGCACAAACCAGAAAAAGCCCAAGCCTAA
Upstream 100 bases:
>100_bases AGTGTGATCGTTGAAAGCGGCAATCCAATCATGGATGTCATTGGCTCAGCTTGGATTCACTTGGTAGCGATGTTCCGCTA CATCTACTAGGGGGTGAACC
Downstream 100 bases:
>100_bases TCATGCCATCGCCTTAAGTGCTCAATACTTAAGGCGACTCTTGTTCTTATCGCGCTCATTTCATTGCGCTGTCTGTACCA ATTTCCATTTCAACCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV LWALYHFTHKPEKAQA
Sequences:
>Translated_336_residues MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV LWALYHFTHKPEKAQA >Mature_336_residues MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLGLLRTLLPTLLAASTALVVTE VFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNWILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFP VERGGKPPAFEEEPVTFENRAISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSKELGLESTFLRAWELTVTLFV LWALYHFTHKPEKAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37631; Mature: 37631
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCHHHH LLRTLLPTLLAASTALVVTEVFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNW HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHH ILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFPVERGGKPPAFEEEPVTFENR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHH ELGLESTFLRAWELTVTLFVLWALYHFTHKPEKAQA HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MWTFESLFQSRSERNEALRVALTVTICMVLGKLLNLDSPVYLALYPTIIMTKNKDYSWLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCCHHHH LLRTLLPTLLAASTALVVTEVFSQHPFVVWTISLFFFDFMRRRATTPPKKGQMLMPTFNW HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHH ILIVVFAQHTTMDMPMRIHEILLSMLITMVVAKTMVALFPVERGGKPPAFEEEPVTFENR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AISLALIGLGVAFLMIVDIISATFCLVPVIAAATQTTHKSFIDVVDRRFQTQVGGCALAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VFTFLMAGHQSTFGYYTIVLGLLAFMITASMAKAKGPAKDVHADALLATMLPIQLYMTSK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEHH ELGLESTFLRAWELTVTLFVLWALYHFTHKPEKAQA HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA