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The map label for this gene is 156978206

Identifier: 156978206

GI number: 156978206

Start: 2090590

End: 2091159

Strand: Reverse

Name: 156978206

Synonym: VIBHAR_07011

Alternate gene names: NA

Gene position: 2091159-2090590 (Counterclockwise)

Preceding gene: 156978210

Following gene: 156978205

Centisome position: 94.88

GC content: 44.74

Gene sequence:

>570_bases
ATGAAAGAACTTAGCCCAACGGCTGCAAAGATTGCCGACCTTGCTGAAAGCTACATACAAAGCCGAGGTTTTAATGGTTT
TAGCTTTCGCGATATCCAAAATGAACTGGGTATCAAGACCGCGAGTATTCACTACCATTTCAAAACCAAGCAAGACTTGG
CGGAAGCGGTGTTTGAACGCTATCTCGCAAACTACGAAGCGGCGTTAATTCAGATCGAGAGCCAACCAAGCAGTGCTGAG
GAAAAAATTGAAGCGTTGGCTGATATTTTTATTGGTGTACGCGAGCAAGATAAGCTGTGTTTGTGTGGCATGTACGCTTC
TGACTTTTACTCTTTGGCAGATGGTTTAGAAGGGCTGCTGTCGCGCTTTGTACAAACGAATGAGCAATGGCTACAAAAAA
TCATTGATCAGGGTGCAGAAAATGGAGAGTTCGACTTACGAGTGGAATCCGCCCAAGTTGCAAGGCTAATCTTTGTTGCG
CTGGAAGGCAGTATGTTACTTTCTCAGTTTAAAGATGCTGATTACATTCGTAGCGTGAAGGCGAGTTGTCTCGCACTCCT
TAAACGCTAA

Upstream 100 bases:

>100_bases
AGGTTGAGTCTTTTTTGAAAAATAAACAATACCTATCGGTAGGTAGACAGATTTGTGAGGGCATGCTATCTTTTGCGAAA
ATGTTTAAGGTGGAAGCCAC

Downstream 100 bases:

>100_bases
TATTTTCATAATATTACCCGCGATAAGTGCGGGTATTATTTTAAATCCAATAACTATCTACTGGTAGGTATGTAATGATT
AAAGACAAAAGAGCGCTAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Of TetR Family Protein; TetR-Family Transcriptional Regulator; HTH-Type Protein SlmA; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKELSPTAAKIADLAESYIQSRGFNGFSFRDIQNELGIKTASIHYHFKTKQDLAEAVFERYLANYEAALIQIESQPSSAE
EKIEALADIFIGVREQDKLCLCGMYASDFYSLADGLEGLLSRFVQTNEQWLQKIIDQGAENGEFDLRVESAQVARLIFVA
LEGSMLLSQFKDADYIRSVKASCLALLKR

Sequences:

>Translated_189_residues
MKELSPTAAKIADLAESYIQSRGFNGFSFRDIQNELGIKTASIHYHFKTKQDLAEAVFERYLANYEAALIQIESQPSSAE
EKIEALADIFIGVREQDKLCLCGMYASDFYSLADGLEGLLSRFVQTNEQWLQKIIDQGAENGEFDLRVESAQVARLIFVA
LEGSMLLSQFKDADYIRSVKASCLALLKR
>Mature_189_residues
MKELSPTAAKIADLAESYIQSRGFNGFSFRDIQNELGIKTASIHYHFKTKQDLAEAVFERYLANYEAALIQIESQPSSAE
EKIEALADIFIGVREQDKLCLCGMYASDFYSLADGLEGLLSRFVQTNEQWLQKIIDQGAENGEFDLRVESAQVARLIFVA
LEGSMLLSQFKDADYIRSVKASCLALLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21221; Mature: 21221

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELSPTAAKIADLAESYIQSRGFNGFSFRDIQNELGIKTASIHYHFKTKQDLAEAVFER
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHH
YLANYEAALIQIESQPSSAEEKIEALADIFIGVREQDKLCLCGMYASDFYSLADGLEGLL
HHHCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SRFVQTNEQWLQKIIDQGAENGEFDLRVESAQVARLIFVALEGSMLLSQFKDADYIRSVK
HHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ASCLALLKR
HHHHHHHCC
>Mature Secondary Structure
MKELSPTAAKIADLAESYIQSRGFNGFSFRDIQNELGIKTASIHYHFKTKQDLAEAVFER
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHH
YLANYEAALIQIESQPSSAEEKIEALADIFIGVREQDKLCLCGMYASDFYSLADGLEGLL
HHHCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SRFVQTNEQWLQKIIDQGAENGEFDLRVESAQVARLIFVALEGSMLLSQFKDADYIRSVK
HHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ASCLALLKR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA