| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978205
Identifier: 156978205
GI number: 156978205
Start: 2090117
End: 2090515
Strand: Reverse
Name: 156978205
Synonym: VIBHAR_07010
Alternate gene names: NA
Gene position: 2090515-2090117 (Counterclockwise)
Preceding gene: 156978206
Following gene: 156978203
Centisome position: 94.85
GC content: 49.87
Gene sequence:
>399_bases ATGATTAAAGACAAAAGAGCGCTAGAGATGAACGGCATTGATGCCGCAGGCGCAGAACAATTTGAACGGATTCTCGAAGA TACGTTGACCTTTCTTCCTAGTGCAATGAGCGATCTCGATCAGCTGCTACTGCGCTATCCGGACTTTATGATGGGATGGA TTTTTAAGGCGTACAGCCATGCGAGTGATGGGCGTCGTTCTACTTTACCCATCGTGGCTAAAATGGCTACACAGTTGGAT AAGTTCGCGCAATCGGCAACCAAACGTGAAGCGCTGCACATGCATGCGTTGAAACAATGGAGCCAAAGCAATCTGAAGGG GGCTCTGGACCTGAGGGATCCCCACATCTTTTCACCGGAACTCTGCCGCACTTATCGCTTTGAGGCCTCCTACGGCTAA
Upstream 100 bases:
>100_bases GTTGTCTCGCACTCCTTAAACGCTAATATTTTCATAATATTACCCGCGATAAGTGCGGGTATTATTTTAAATCCAATAAC TATCTACTGGTAGGTATGTA
Downstream 100 bases:
>100_bases GGCCAGATCCTTCACGCTAAATGAGTAAGCTTCTCTTCCTATCAACTCTTTACCGAGAAAAAAGTAGGAAAGTACCCGGC GTGTTCGAATGGTATTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIKDKRALEMNGIDAAGAEQFERILEDTLTFLPSAMSDLDQLLLRYPDFMMGWIFKAYSHASDGRRSTLPIVAKMATQLD KFAQSATKREALHMHALKQWSQSNLKGALDLRDPHIFSPELCRTYRFEASYG
Sequences:
>Translated_132_residues MIKDKRALEMNGIDAAGAEQFERILEDTLTFLPSAMSDLDQLLLRYPDFMMGWIFKAYSHASDGRRSTLPIVAKMATQLD KFAQSATKREALHMHALKQWSQSNLKGALDLRDPHIFSPELCRTYRFEASYG >Mature_132_residues MIKDKRALEMNGIDAAGAEQFERILEDTLTFLPSAMSDLDQLLLRYPDFMMGWIFKAYSHASDGRRSTLPIVAKMATQLD KFAQSATKREALHMHALKQWSQSNLKGALDLRDPHIFSPELCRTYRFEASYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15087; Mature: 15087
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDKRALEMNGIDAAGAEQFERILEDTLTFLPSAMSDLDQLLLRYPDFMMGWIFKAYSH CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ASDGRRSTLPIVAKMATQLDKFAQSATKREALHMHALKQWSQSNLKGALDLRDPHIFSPE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LCRTYRFEASYG HHHHHHCCCCCC >Mature Secondary Structure MIKDKRALEMNGIDAAGAEQFERILEDTLTFLPSAMSDLDQLLLRYPDFMMGWIFKAYSH CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ASDGRRSTLPIVAKMATQLDKFAQSATKREALHMHALKQWSQSNLKGALDLRDPHIFSPE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH LCRTYRFEASYG HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA