| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156978202
Identifier: 156978202
GI number: 156978202
Start: 2086887
End: 2087717
Strand: Direct
Name: 156978202
Synonym: VIBHAR_07007
Alternate gene names: NA
Gene position: 2086887-2087717 (Clockwise)
Preceding gene: 156978201
Following gene: 156978204
Centisome position: 94.69
GC content: 47.29
Gene sequence:
>831_bases ATGAAATCGATTGTCGCGATGTTGCGTAAAGAATGGCTAGAGTACCCATTGGTTACACGCGTGCCGTTATTTATGTTTGC CTGTGGTGTGCTGCTGTTTGTCAGCTTGATGAGTAGCTCGACACTGCAACACAATATGTTCTTCCAAATGAGCTTTGGTG GTGATGTCAGTGATATCCACAAAGAACTAGGCGATGACGTCAACATGCTGATCACAGGTGGCATTGGTTTGTTGTCTATC CTGCTTGGCACTCAATACTTCCCAAGAACGCTACGTAAAGAGCGCTCAGAGGGCAGTATCATGTTTTGGCGCAGTATGCC TGTCAGTGACGTAAAAAACCATCTGGTGAAGCTGGCGTTCGGTTTATTGGTGATTCCATTGGTGTGTTCGGTATTGGTTT TCGCTGCGGACTTTATGCTGTGGATGTTGAATGTTTCAACTAACCACCAGTTGGCGTTGTTGTATCGCCAGGCTTCATTG GGTTTCGTGCTGCTGAACTGGATTGAATTTTTACTTCGAATGGTAGTGGCTGGCGTGTTGTTATTGCCGCTTGCACTGAC CGCAATGGCAATCTCACAGAAAGTGAACTCACCACTGTTGGTCATCTTGATTGGTATTTACGCGCTGCGCTGGATGCCGA TTGCAATGTTCAACTTCTATGGACTGGATGATTTCTTCTCAGCGATTTTCTATCTACCGCTGCACGCGATTCTTGCACCA AACCCGTTCAGCGCGATTCCAGATGCAGGTTGGATGAACGTTGGGATTTACGCCTTCATCGGTGTGCTTGCTTGGACGGC TAGCATCAAGTTCAGCCGCACTGTGAACTAA
Upstream 100 bases:
>100_bases TGCTGTCGTCCCAATACGCAGAGCAAGTTGCAGGTCTGGGTGATGTGTATGGCGTCAAGCTTGCGGATCTGTTCTTGGCA TTGCAGAAGGAGGCAGCATA
Downstream 100 bases:
>100_bases CAAGCACAAGCAAAACAAACCCATCAAAAGCGAGGTACTGTCCTCGCTTTTTTATTTCCGACCCCATTTTATTGCCGCAC CCAGGCAGCATTTGCGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKSIVAMLRKEWLEYPLVTRVPLFMFACGVLLFVSLMSSSTLQHNMFFQMSFGGDVSDIHKELGDDVNMLITGGIGLLSI LLGTQYFPRTLRKERSEGSIMFWRSMPVSDVKNHLVKLAFGLLVIPLVCSVLVFAADFMLWMLNVSTNHQLALLYRQASL GFVLLNWIEFLLRMVVAGVLLLPLALTAMAISQKVNSPLLVILIGIYALRWMPIAMFNFYGLDDFFSAIFYLPLHAILAP NPFSAIPDAGWMNVGIYAFIGVLAWTASIKFSRTVN
Sequences:
>Translated_276_residues MKSIVAMLRKEWLEYPLVTRVPLFMFACGVLLFVSLMSSSTLQHNMFFQMSFGGDVSDIHKELGDDVNMLITGGIGLLSI LLGTQYFPRTLRKERSEGSIMFWRSMPVSDVKNHLVKLAFGLLVIPLVCSVLVFAADFMLWMLNVSTNHQLALLYRQASL GFVLLNWIEFLLRMVVAGVLLLPLALTAMAISQKVNSPLLVILIGIYALRWMPIAMFNFYGLDDFFSAIFYLPLHAILAP NPFSAIPDAGWMNVGIYAFIGVLAWTASIKFSRTVN >Mature_276_residues MKSIVAMLRKEWLEYPLVTRVPLFMFACGVLLFVSLMSSSTLQHNMFFQMSFGGDVSDIHKELGDDVNMLITGGIGLLSI LLGTQYFPRTLRKERSEGSIMFWRSMPVSDVKNHLVKLAFGLLVIPLVCSVLVFAADFMLWMLNVSTNHQLALLYRQASL GFVLLNWIEFLLRMVVAGVLLLPLALTAMAISQKVNSPLLVILIGIYALRWMPIAMFNFYGLDDFFSAIFYLPLHAILAP NPFSAIPDAGWMNVGIYAFIGVLAWTASIKFSRTVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30956; Mature: 30956
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIVAMLRKEWLEYPLVTRVPLFMFACGVLLFVSLMSSSTLQHNMFFQMSFGGDVSDIH CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCHHHHH KELGDDVNMLITGGIGLLSILLGTQYFPRTLRKERSEGSIMFWRSMPVSDVKNHLVKLAF HHHCCCHHEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH GLLVIPLVCSVLVFAADFMLWMLNVSTNHQLALLYRQASLGFVLLNWIEFLLRMVVAGVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LLPLALTAMAISQKVNSPLLVILIGIYALRWMPIAMFNFYGLDDFFSAIFYLPLHAILAP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC NPFSAIPDAGWMNVGIYAFIGVLAWTASIKFSRTVN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKSIVAMLRKEWLEYPLVTRVPLFMFACGVLLFVSLMSSSTLQHNMFFQMSFGGDVSDIH CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEECCCCHHHHH KELGDDVNMLITGGIGLLSILLGTQYFPRTLRKERSEGSIMFWRSMPVSDVKNHLVKLAF HHHCCCHHEEEECHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH GLLVIPLVCSVLVFAADFMLWMLNVSTNHQLALLYRQASLGFVLLNWIEFLLRMVVAGVL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LLPLALTAMAISQKVNSPLLVILIGIYALRWMPIAMFNFYGLDDFFSAIFYLPLHAILAP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC NPFSAIPDAGWMNVGIYAFIGVLAWTASIKFSRTVN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA