Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is yhcG [H]

Identifier: 156978201

GI number: 156978201

Start: 2086030

End: 2086887

Strand: Direct

Name: yhcG [H]

Synonym: VIBHAR_07006

Alternate gene names: 156978201

Gene position: 2086030-2086887 (Clockwise)

Preceding gene: 156978200

Following gene: 156978202

Centisome position: 94.65

GC content: 50.35

Gene sequence:

>858_bases
ATGAGCGCATTAGTCAGTGTAAAACACGTCTCCAAGCAATATCGTCAGCAGGGTGAAGCACTGCATGACGTGAGCTTTGA
TCTACAAGCGGGTCAGGTGCTTGGCTTGCTAGGTCATAACGGTGCGGGTAAATCGACTCTCATTAACGCCCTACTCGGTG
CACACGAATATCAGGGCACCATTCGCATCAACGGCTTTGAGCCAATCATGCAACGCGACAAAATCATGCAGAGCTTATCT
TACATTTCGGATGTGAACGTTCTGCCAAACTGGATGACGGTTGCTCAGCTGCTCGATTACACCGAGGGCGTACACCCAGG
TTTTAATCGCAGCAAAGCCGATGCCATGCTTCGTCAAACCGATATCAAGCCGCGTGCACGCATCAAATCCCTATCGAAAG
GCATGAAGGTGCAATTGCACTTGGCTGTCGTCATCGCGACCCATACGCAGATTCTGATTCTAGACGAGCCAACGCTTGGC
CTGGATTTGGTTTATCGCGATACCTTCTACCGTCATTTGCTGGAATGGTTCCACGATGGCGAGCGTGTGTTGATCATAGC
GAGCCATGAAGTATCGGAAATCGAACACCTACTGACGGACGTGCTGATCCTTAAACACGGCCGACCTGTTCTGCAAACCT
CAATGGACAACATCAGCGAAGATTACTTCATTCTCGATGCCAGTGATGATCATCGCGCACAAATCGAAGCGCTGAAACCA
CTGTCATCGCAAAAAGGCGTAGGCACGACTAAATGGTTGCTGTCGTCCCAATACGCAGAGCAAGTTGCAGGTCTGGGTGA
TGTGTATGGCGTCAAGCTTGCGGATCTGTTCTTGGCATTGCAGAAGGAGGCAGCATAA

Upstream 100 bases:

>100_bases
TTGAACAACAAATTCCGCAGATCGCCGACACACTACAACGTCTGGATATGTCACTTGATGAATTTATCCAACAAATCAAA
ACACATATTGAAGGTGACCA

Downstream 100 bases:

>100_bases
TGAAATCGATTGTCGCGATGTTGCGTAAAGAATGGCTAGAGTACCCATTGGTTACACGCGTGCCGTTATTTATGTTTGCC
TGTGGTGTGCTGCTGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSALVSVKHVSKQYRQQGEALHDVSFDLQAGQVLGLLGHNGAGKSTLINALLGAHEYQGTIRINGFEPIMQRDKIMQSLS
YISDVNVLPNWMTVAQLLDYTEGVHPGFNRSKADAMLRQTDIKPRARIKSLSKGMKVQLHLAVVIATHTQILILDEPTLG
LDLVYRDTFYRHLLEWFHDGERVLIIASHEVSEIEHLLTDVLILKHGRPVLQTSMDNISEDYFILDASDDHRAQIEALKP
LSSQKGVGTTKWLLSSQYAEQVAGLGDVYGVKLADLFLALQKEAA

Sequences:

>Translated_285_residues
MSALVSVKHVSKQYRQQGEALHDVSFDLQAGQVLGLLGHNGAGKSTLINALLGAHEYQGTIRINGFEPIMQRDKIMQSLS
YISDVNVLPNWMTVAQLLDYTEGVHPGFNRSKADAMLRQTDIKPRARIKSLSKGMKVQLHLAVVIATHTQILILDEPTLG
LDLVYRDTFYRHLLEWFHDGERVLIIASHEVSEIEHLLTDVLILKHGRPVLQTSMDNISEDYFILDASDDHRAQIEALKP
LSSQKGVGTTKWLLSSQYAEQVAGLGDVYGVKLADLFLALQKEAA
>Mature_284_residues
SALVSVKHVSKQYRQQGEALHDVSFDLQAGQVLGLLGHNGAGKSTLINALLGAHEYQGTIRINGFEPIMQRDKIMQSLSY
ISDVNVLPNWMTVAQLLDYTEGVHPGFNRSKADAMLRQTDIKPRARIKSLSKGMKVQLHLAVVIATHTQILILDEPTLGL
DLVYRDTFYRHLLEWFHDGERVLIIASHEVSEIEHLLTDVLILKHGRPVLQTSMDNISEDYFILDASDDHRAQIEALKPL
SSQKGVGTTKWLLSSQYAEQVAGLGDVYGVKLADLFLALQKEAA

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=29.3023255813954, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=29.1079812206573, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI6005701, Length=235, Percent_Identity=29.3617021276596, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI27477115, Length=240, Percent_Identity=29.5833333333333, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI47078218, Length=212, Percent_Identity=28.7735849056604, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI45446740, Length=212, Percent_Identity=28.7735849056604, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=29.8578199052133, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI150417984, Length=215, Percent_Identity=29.7674418604651, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI27436953, Length=215, Percent_Identity=29.3023255813954, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI27262624, Length=211, Percent_Identity=28.9099526066351, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27262626, Length=211, Percent_Identity=28.9099526066351, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI11967969, Length=211, Percent_Identity=26.0663507109005, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1786319, Length=240, Percent_Identity=29.5833333333333, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788210, Length=221, Percent_Identity=33.4841628959276, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788897, Length=206, Percent_Identity=31.0679611650485, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=31.1320754716981, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=29.3838862559242, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI48994943, Length=206, Percent_Identity=30.0970873786408, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=24.6861924686192, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790739, Length=202, Percent_Identity=27.2277227722772, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87081782, Length=200, Percent_Identity=29, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790190, Length=236, Percent_Identity=24.5762711864407, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48995001, Length=201, Percent_Identity=29.8507462686567, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789991, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI48994883, Length=211, Percent_Identity=27.9620853080569, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786345, Length=171, Percent_Identity=30.4093567251462, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788472, Length=214, Percent_Identity=27.1028037383178, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788450, Length=225, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=233, Percent_Identity=26.1802575107296, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI87081791, Length=214, Percent_Identity=24.7663551401869, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=214, Percent_Identity=31.3084112149533, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=218, Percent_Identity=27.0642201834862, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71983516, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=211, Percent_Identity=28.436018957346, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=211, Percent_Identity=28.436018957346, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=202, Percent_Identity=27.7227722772277, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71985417, Length=205, Percent_Identity=27.3170731707317, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17552010, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24666092, Length=262, Percent_Identity=29.0076335877863, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI116007184, Length=219, Percent_Identity=28.7671232876712, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=28.7671232876712, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573573, Length=270, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28573571, Length=270, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650853, Length=201, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221512771, Length=268, Percent_Identity=25.7462686567164, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28574150, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007328, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24650855, Length=201, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281362751, Length=202, Percent_Identity=27.2277227722772, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581387, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581383, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24581385, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571209, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24582014, Length=260, Percent_Identity=26.1538461538462, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24582012, Length=260, Percent_Identity=26.1538461538462, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI85725262, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500419, Length=223, Percent_Identity=30.4932735426009, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24648314, Length=212, Percent_Identity=25, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 31759; Mature: 31628

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSALVSVKHVSKQYRQQGEALHDVSFDLQAGQVLGLLGHNGAGKSTLINALLGAHEYQGT
CCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
IRINGFEPIMQRDKIMQSLSYISDVNVLPNWMTVAQLLDYTEGVHPGFNRSKADAMLRQT
EEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
DIKPRARIKSLSKGMKVQLHLAVVIATHTQILILDEPTLGLDLVYRDTFYRHLLEWFHDG
CCCHHHHHHHHHCCCEEEEEEEEEEECCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCC
ERVLIIASHEVSEIEHLLTDVLILKHGRPVLQTSMDNISEDYFILDASDDHRAQIEALKP
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCC
LSSQKGVGTTKWLLSSQYAEQVAGLGDVYGVKLADLFLALQKEAA
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SALVSVKHVSKQYRQQGEALHDVSFDLQAGQVLGLLGHNGAGKSTLINALLGAHEYQGT
CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
IRINGFEPIMQRDKIMQSLSYISDVNVLPNWMTVAQLLDYTEGVHPGFNRSKADAMLRQT
EEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
DIKPRARIKSLSKGMKVQLHLAVVIATHTQILILDEPTLGLDLVYRDTFYRHLLEWFHDG
CCCHHHHHHHHHCCCEEEEEEEEEEECCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCC
ERVLIIASHEVSEIEHLLTDVLILKHGRPVLQTSMDNISEDYFILDASDDHRAQIEALKP
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCC
LSSQKGVGTTKWLLSSQYAEQVAGLGDVYGVKLADLFLALQKEAA
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]