| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156978148
Identifier: 156978148
GI number: 156978148
Start: 2047410
End: 2047913
Strand: Direct
Name: 156978148
Synonym: VIBHAR_06953
Alternate gene names: NA
Gene position: 2047410-2047913 (Clockwise)
Preceding gene: 156978146
Following gene: 156978150
Centisome position: 92.89
GC content: 47.62
Gene sequence:
>504_bases ATGACTAACACCACAGGCCGTAAGCGCAAGCAGAAACCGGAACCGCAACCCTCACTTTGGGCTCGTCATCAGCTCAAAAT CATCAAAGGAGGTTTTGCTCTGTTTGGGTGCGCGTTGTTTGGCGTGATCAGTTATCTACTTTATGCCTCTTATTTGGATT ACATCGATCGCGATAAAATCTATGGCGAATGGATTGAAATTGGTGCCCCACCTTATCAAACCGAGCACCTTTCCTTTACT TCCAACGGGGTCTTTCGTAATCACCGTTTGATCGCCACTCAATTTGAGTTTGATGGTAAAGTCATCACTCTAAACACAGG CTTGGGTAAAACCGAGTATCAGTTGTCAGGTTCTCACCTCTCCCCACAAATACGCCGTATTGAACCTCGCTTTCCCGATC AGAGATTTATTCTCAAAGGCTTCGAGCACACAGTTCAAGGCTCAGAAACTGGGGCGGCTTCCAAACGTCGTGCCGCACTA AGTGAACACTTCGGCCGCAAGTAG
Upstream 100 bases:
>100_bases GTGGACATCAGATCATAGTTTCACCGTGTTAAAGACGAGATTGTTTGTTTTTACAGCTCAAGCTTCTCACCATATTGGAA AAGGAAAGTAAGCAGGGATC
Downstream 100 bases:
>100_bases CCTTTTATCCATCACTTCTCTTCTGTATACAAAACAAACACTTTTTGTCGTAACCAACTCTATTACAAAGTAAAAGTTTA ATTTCACTTGCAAAATAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTNTTGRKRKQKPEPQPSLWARHQLKIIKGGFALFGCALFGVISYLLYASYLDYIDRDKIYGEWIEIGAPPYQTEHLSFT SNGVFRNHRLIATQFEFDGKVITLNTGLGKTEYQLSGSHLSPQIRRIEPRFPDQRFILKGFEHTVQGSETGAASKRRAAL SEHFGRK
Sequences:
>Translated_167_residues MTNTTGRKRKQKPEPQPSLWARHQLKIIKGGFALFGCALFGVISYLLYASYLDYIDRDKIYGEWIEIGAPPYQTEHLSFT SNGVFRNHRLIATQFEFDGKVITLNTGLGKTEYQLSGSHLSPQIRRIEPRFPDQRFILKGFEHTVQGSETGAASKRRAAL SEHFGRK >Mature_166_residues TNTTGRKRKQKPEPQPSLWARHQLKIIKGGFALFGCALFGVISYLLYASYLDYIDRDKIYGEWIEIGAPPYQTEHLSFTS NGVFRNHRLIATQFEFDGKVITLNTGLGKTEYQLSGSHLSPQIRRIEPRFPDQRFILKGFEHTVQGSETGAASKRRAALS EHFGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19048; Mature: 18917
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTTGRKRKQKPEPQPSLWARHQLKIIKGGFALFGCALFGVISYLLYASYLDYIDRDKI CCCCCCCCCCCCCCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YGEWIEIGAPPYQTEHLSFTSNGVFRNHRLIATQFEFDGKVITLNTGLGKTEYQLSGSHL HHHHHCCCCCCCCCCEEEECCCCEEECCEEEEEEEECCCEEEEEECCCCCCEEEECCCCC SPQIRRIEPRFPDQRFILKGFEHTVQGSETGAASKRRAALSEHFGRK CCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TNTTGRKRKQKPEPQPSLWARHQLKIIKGGFALFGCALFGVISYLLYASYLDYIDRDKI CCCCCCCCCCCCCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YGEWIEIGAPPYQTEHLSFTSNGVFRNHRLIATQFEFDGKVITLNTGLGKTEYQLSGSHL HHHHHCCCCCCCCCCEEEECCCCEEECCEEEEEEEECCCEEEEEECCCCCCEEEECCCCC SPQIRRIEPRFPDQRFILKGFEHTVQGSETGAASKRRAALSEHFGRK CCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA