| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is insG [H]
Identifier: 156978146
GI number: 156978146
Start: 2045527
End: 2046858
Strand: Direct
Name: insG [H]
Synonym: VIBHAR_06951
Alternate gene names: 156978146
Gene position: 2045527-2046858 (Clockwise)
Preceding gene: 156978144
Following gene: 156978148
Centisome position: 92.81
GC content: 43.84
Gene sequence:
>1332_bases ATGTTGGCTCACTGGCTTATTGATGTTGATGACTTTGCTTCTCCTGATTCACTTGCGCTTTTTCAAAAAGAGCTTCCATT GGAATGGATAAACCAAGCGCTTGATGAAACGAATAAAGCCAGCATGAGAAGGCGAAAGCTACCTGCTGAGTTGGTCGTTT GGTTGCTAGTCGGTATTGGCTTGTATCGCGACAGACCTATTACTGATGTTTTGGAGAAGTTGGACCTAAAACTATCCAAC TCTTTAGGTGAATCCATTGCTCCAAGTGCTATTCCTCAAGCCAGAAAACGTCTCACTGCAGGGCCACTAAAAGCCCTATT CACTATGACGGCTCAGCACTGGACTAAGTCCGAAGATAGCGAGGATAAATGGTTTGGTTTAAGACTATTTTCAGTCGATG GGACTCAATTTAGAACTCATGATAACAAGGCGCTTGCTAATCACTATCAGTACGTTAAGCACAGTAAAAGTCGTCACACC GAGTATCCTGTTGTAAGGCTATGCGCGCTTTGCTCTCTTCGTAGTCGTTTACTCCATGATGTTGCTTTTGGTCCTAGTTC AACAGGAGAAGTGAGTTACGCAAAACAGTTAATATCATCAACGATGCCTAACTCCCTCACGATCTTTGACAGATGTTATT TAAGTGCCGAGCTAATGATTAATTGGCAGCGTCAACACAATTCTAGTCACTGGATGACCCCAATAAAATCCAATACACAG TATGAAGTCATCAAGAAGCTAGACAAGGAAGGACGTGATTTGATTGTCGAAATGGATGTCTCACAGCATGCACGCAAACA AGATCCAAGTCTCCCAGATAAATGGCAAGCGAGATTAGCACTGTACCCTGAGCCAGAACAACCTAACCATATAAAAGGCG TACTAACTTCGCTAACCGATAGTCAATATGACCTTCAATCCCTACTGGATGTCTACTTCGAGCGTTGGGAAGTTGAGAAC AGTTATGGAGAGATAAAACACGACATGCTGGAAGATGAACTTCTTCTTCGAAGCCAGTCAGTAGAGGGAATAGAGCAAGA GGTCTGGGGAATATTAATCGCTTATAACTTGGTTCGTGTAGAGATAAGCCGTATTGCTAAAGAAGCGAAGGTATCGCCTC TGCGGATAAGTTTTATGATGGCACTTCGAGATATTCAAGATGAACTTATGTGGTGTGCAATAGCATCACCAGGCTCGATC CCTAAAAAATTGAGGGCGATGCGAGAGCGGGTGAAGCGCTACATTCTGCCAGAGCGAAAAAAACGGCCCAAATCAAGGAC CGTTCGTATGAGTAAGACTCGCTATCCAGTTCGCTCCAAACACGTTAAGTGA
Upstream 100 bases:
>100_bases CCCGAAGGTTAACTCCGATCAGTTAAGCAAATGATCAGTTGAACGATCCTGTGGTTGGTTGAAAATACCCTCAAGCATTT CATGTTTGAGGGTATTTTTT
Downstream 100 bases:
>100_bases TAGGAGTTAACCCGAAGGTGGCTTTCATTTCAATTCGATTTATTGCTTATAGGTACTCACACAAGTACGCGGTTGCATCT TTTACTTGCAGCTCGAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MLAHWLIDVDDFASPDSLALFQKELPLEWINQALDETNKASMRRRKLPAELVVWLLVGIGLYRDRPITDVLEKLDLKLSN SLGESIAPSAIPQARKRLTAGPLKALFTMTAQHWTKSEDSEDKWFGLRLFSVDGTQFRTHDNKALANHYQYVKHSKSRHT EYPVVRLCALCSLRSRLLHDVAFGPSSTGEVSYAKQLISSTMPNSLTIFDRCYLSAELMINWQRQHNSSHWMTPIKSNTQ YEVIKKLDKEGRDLIVEMDVSQHARKQDPSLPDKWQARLALYPEPEQPNHIKGVLTSLTDSQYDLQSLLDVYFERWEVEN SYGEIKHDMLEDELLLRSQSVEGIEQEVWGILIAYNLVRVEISRIAKEAKVSPLRISFMMALRDIQDELMWCAIASPGSI PKKLRAMRERVKRYILPERKKRPKSRTVRMSKTRYPVRSKHVK
Sequences:
>Translated_443_residues MLAHWLIDVDDFASPDSLALFQKELPLEWINQALDETNKASMRRRKLPAELVVWLLVGIGLYRDRPITDVLEKLDLKLSN SLGESIAPSAIPQARKRLTAGPLKALFTMTAQHWTKSEDSEDKWFGLRLFSVDGTQFRTHDNKALANHYQYVKHSKSRHT EYPVVRLCALCSLRSRLLHDVAFGPSSTGEVSYAKQLISSTMPNSLTIFDRCYLSAELMINWQRQHNSSHWMTPIKSNTQ YEVIKKLDKEGRDLIVEMDVSQHARKQDPSLPDKWQARLALYPEPEQPNHIKGVLTSLTDSQYDLQSLLDVYFERWEVEN SYGEIKHDMLEDELLLRSQSVEGIEQEVWGILIAYNLVRVEISRIAKEAKVSPLRISFMMALRDIQDELMWCAIASPGSI PKKLRAMRERVKRYILPERKKRPKSRTVRMSKTRYPVRSKHVK >Mature_443_residues MLAHWLIDVDDFASPDSLALFQKELPLEWINQALDETNKASMRRRKLPAELVVWLLVGIGLYRDRPITDVLEKLDLKLSN SLGESIAPSAIPQARKRLTAGPLKALFTMTAQHWTKSEDSEDKWFGLRLFSVDGTQFRTHDNKALANHYQYVKHSKSRHT EYPVVRLCALCSLRSRLLHDVAFGPSSTGEVSYAKQLISSTMPNSLTIFDRCYLSAELMINWQRQHNSSHWMTPIKSNTQ YEVIKKLDKEGRDLIVEMDVSQHARKQDPSLPDKWQARLALYPEPEQPNHIKGVLTSLTDSQYDLQSLLDVYFERWEVEN SYGEIKHDMLEDELLLRSQSVEGIEQEVWGILIAYNLVRVEISRIAKEAKVSPLRISFMMALRDIQDELMWCAIASPGSI PKKLRAMRERVKRYILPERKKRPKSRTVRMSKTRYPVRSKHVK
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=415, Percent_Identity=35.421686746988, Blast_Score=234, Evalue=6e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 51325; Mature: 51325
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAHWLIDVDDFASPDSLALFQKELPLEWINQALDETNKASMRRRKLPAELVVWLLVGIG CCCEEEEEHHHCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH LYRDRPITDVLEKLDLKLSNSLGESIAPSAIPQARKRLTAGPLKALFTMTAQHWTKSEDS HCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EDKWFGLRLFSVDGTQFRTHDNKALANHYQYVKHSKSRHTEYPVVRLCALCSLRSRLLHD CCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAFGPSSTGEVSYAKQLISSTMPNSLTIFDRCYLSAELMINWQRQHNSSHWMTPIKSNTQ HHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCH YEVIKKLDKEGRDLIVEMDVSQHARKQDPSLPDKWQARLALYPEPEQPNHIKGVLTSLTD HHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHCC SQYDLQSLLDVYFERWEVENSYGEIKHDMLEDELLLRSQSVEGIEQEVWGILIAYNLVRV CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISRIAKEAKVSPLRISFMMALRDIQDELMWCAIASPGSIPKKLRAMRERVKRYILPERK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHH KRPKSRTVRMSKTRYPVRSKHVK CCCHHHCEEEHHCCCCCCCCCCC >Mature Secondary Structure MLAHWLIDVDDFASPDSLALFQKELPLEWINQALDETNKASMRRRKLPAELVVWLLVGIG CCCEEEEEHHHCCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH LYRDRPITDVLEKLDLKLSNSLGESIAPSAIPQARKRLTAGPLKALFTMTAQHWTKSEDS HCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EDKWFGLRLFSVDGTQFRTHDNKALANHYQYVKHSKSRHTEYPVVRLCALCSLRSRLLHD CCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAFGPSSTGEVSYAKQLISSTMPNSLTIFDRCYLSAELMINWQRQHNSSHWMTPIKSNTQ HHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCH YEVIKKLDKEGRDLIVEMDVSQHARKQDPSLPDKWQARLALYPEPEQPNHIKGVLTSLTD HHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCHHHCCEEEECCCCCCCCHHHHHHHHHCC SQYDLQSLLDVYFERWEVENSYGEIKHDMLEDELLLRSQSVEGIEQEVWGILIAYNLVRV CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISRIAKEAKVSPLRISFMMALRDIQDELMWCAIASPGSIPKKLRAMRERVKRYILPERK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHH KRPKSRTVRMSKTRYPVRSKHVK CCCHHHCEEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]