Click here to switch to the map view.

The map label for this gene is 156978136

Identifier: 156978136

GI number: 156978136

Start: 2036860

End: 2037549

Strand: Reverse

Name: 156978136

Synonym: VIBHAR_06941

Alternate gene names: NA

Gene position: 2037549-2036860 (Counterclockwise)

Preceding gene: 156978137

Following gene: 156978135

Centisome position: 92.45

GC content: 49.13

Gene sequence:

>690_bases
GTGGCACAAGCGATCATCTTCACCACAGTTCCTGAAGGTGAAGGTCTGTACTTCGACAAAGACGGCAACCCAGTCGTGAC
TTCTGAGCGATTTGTGCACGCGTTCGAAGTGGCAAAAGAAATCCGTGACAAAGGCTTGGATGGTCGCATTCTAGCGTGGT
CAAACGAATGGTACGAAGGCTTCCGTAACGGCACATTTGCGACTCAGCTTTCTGGTGCTTGGCTACTTGGTCACCTAAAC
AACTGGATTGCGCCAGAAACAGCAGGCAGCTGGGGCGTGTCTAACCTTCCTGATGGTATTTACGGAAGCTGGGGCGGCTC
ATTCCTATCGATTCCAACCCAATCTAAGCACCAAGATGAAGCGTGGAAGCTAATTGAATACATGACAACCAAGCGTGAAA
TTCAGCTTAAACACTTCGAAACCATTGCAGCATTCCCTGCGAACACCACGACTTACGACGACCCAATGTTCGAAGAGAAA
ATCGAATTCCTAGGTGGTCAGCAAGCGCGTCTATTGTTTGCTGAAGTGGCGCAGAACATCAAGCCAGTGGCACCAGCGAA
AGGCGATCACGTTGCTCGTTCTATCATCCTAGAGAATGCACTGATGGAAGTGTTGGATGAAGGTAAAGACATTAAGACTG
CGCTTAAAGAAGCAGAGCGCATGATCAAGCGTCGTACGCGTAATCTGTAA

Upstream 100 bases:

>100_bases
CATTGATGTTAACTAAGCGATCAAAGATTGGGATTCTTACATTGCAGCAGGTGAAAAACTTAAGCAGCAAAATGTTCAAC
TAATCGCTTCGGCAGCGGAT

Downstream 100 bases:

>100_bases
TTTTTTGCCAATACTTAAGGCAGGAAGGGGGCATGTCCCCCTTCTGGGTAAGAGGTCGTTACTATGAATCATGCAGCGAG
CAAGGTTATGGAAACTCCAG

Product: ABC-type sugar transport system periplasmic protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Component-Like Protein; Sugar Transport System; Sugar ABC Transporter

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAQAIIFTTVPEGEGLYFDKDGNPVVTSERFVHAFEVAKEIRDKGLDGRILAWSNEWYEGFRNGTFATQLSGAWLLGHLN
NWIAPETAGSWGVSNLPDGIYGSWGGSFLSIPTQSKHQDEAWKLIEYMTTKREIQLKHFETIAAFPANTTTYDDPMFEEK
IEFLGGQQARLLFAEVAQNIKPVAPAKGDHVARSIILENALMEVLDEGKDIKTALKEAERMIKRRTRNL

Sequences:

>Translated_229_residues
MAQAIIFTTVPEGEGLYFDKDGNPVVTSERFVHAFEVAKEIRDKGLDGRILAWSNEWYEGFRNGTFATQLSGAWLLGHLN
NWIAPETAGSWGVSNLPDGIYGSWGGSFLSIPTQSKHQDEAWKLIEYMTTKREIQLKHFETIAAFPANTTTYDDPMFEEK
IEFLGGQQARLLFAEVAQNIKPVAPAKGDHVARSIILENALMEVLDEGKDIKTALKEAERMIKRRTRNL
>Mature_228_residues
AQAIIFTTVPEGEGLYFDKDGNPVVTSERFVHAFEVAKEIRDKGLDGRILAWSNEWYEGFRNGTFATQLSGAWLLGHLNN
WIAPETAGSWGVSNLPDGIYGSWGGSFLSIPTQSKHQDEAWKLIEYMTTKREIQLKHFETIAAFPANTTTYDDPMFEEKI
EFLGGQQARLLFAEVAQNIKPVAPAKGDHVARSIILENALMEVLDEGKDIKTALKEAERMIKRRTRNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25762; Mature: 25631

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAIIFTTVPEGEGLYFDKDGNPVVTSERFVHAFEVAKEIRDKGLDGRILAWSNEWYEG
CCCEEEEEECCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
FRNGTFATQLSGAWLLGHLNNWIAPETAGSWGVSNLPDGIYGSWGGSFLSIPTQSKHQDE
HCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHH
AWKLIEYMTTKREIQLKHFETIAAFPANTTTYDDPMFEEKIEFLGGQQARLLFAEVAQNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
KPVAPAKGDHVARSIILENALMEVLDEGKDIKTALKEAERMIKRRTRNL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQAIIFTTVPEGEGLYFDKDGNPVVTSERFVHAFEVAKEIRDKGLDGRILAWSNEWYEG
CCEEEEEECCCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH
FRNGTFATQLSGAWLLGHLNNWIAPETAGSWGVSNLPDGIYGSWGGSFLSIPTQSKHQDE
HCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHH
AWKLIEYMTTKREIQLKHFETIAAFPANTTTYDDPMFEEKIEFLGGQQARLLFAEVAQNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
KPVAPAKGDHVARSIILENALMEVLDEGKDIKTALKEAERMIKRRTRNL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA