Click here to switch to the map view.

The map label for this gene is 156978074

Identifier: 156978074

GI number: 156978074

Start: 1983637

End: 1985181

Strand: Reverse

Name: 156978074

Synonym: VIBHAR_06878

Alternate gene names: NA

Gene position: 1985181-1983637 (Counterclockwise)

Preceding gene: 156978075

Following gene: 156978073

Centisome position: 90.07

GC content: 48.41

Gene sequence:

>1545_bases
ATGAAAAAAACGCCAGTTATCAACCCAGAAAGCCAAGATGTTGCCAAGCTACAAGCGATGGTGAAAGCCCTTCTGCTCTC
TCAGGAGCGGAAGGAGTCTCAATGGAAACAAGAGCGTCAATCCTTACTCGAACAGCTCAAGCTGGCCTTCGACCGTCAGT
TCGCGAAACGCTCCGAGGCGCTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTCAACGAAGTGGAATGTGAAGCCGCT
AAGGAAGAAGAGGTTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAACGCAAGCCCCTTCCAAAGACTTT
GCCTCGTGAGGTTATCGAACTCGATTTAGACGACCATGAAAAACAGTGTGCATGCTGCCAACATAGTCTGCATAAAATCG
GTGAAGACCGCAGTGAGAAACTTGAGTTCTCACCAGCAGTGCTCAAAGTGCTGGAATATGTTCGTCCTAAATATGCTTGT
CGTCAGTGTGAGCAAACTGAAGACAACAGCCACATCGTTCAAAAGCCAGCGCCTCAGAGCATCATCCCTAAAAGCTTCGC
GACAGAAAGCTTGCTGGCCAATATCATCCTTGGTAAATATCAATACGCAATGCCCCTTTACCGCCAAGAGTCGCTGTTTA
CTCAGTCGGGTATTGAGCTATCGCGAACTACCATGGCAAGGTGGGTTATCCAAGTCAGTGAGAAGTTCACACCGCTGTAT
GCGGCCTTAAAAGCGCATCTACTTCAACAAGTGGTGGTTCAGGCGGATGAAACGCCGCTCAATGTCCTTAAAGAAGATAA
ACAGTGTTATATGTGGCTCTACTGCTCGGGCGCAGACTCGCCCGACGCTGCACTGCCGAATGTAAAGAATATCGCCTTGT
ACGACTATCAAAACAGTCGCGCGAGGGTATGCCCTGTTGCCTTCTTGGGGGATTACAGTGGTTATCTGCAAACCGATGGC
TATGGTGCCTATGATGGTCTTCATCACGTAACCAATGTGGGTTGCTTGGCGCATGCACGGCGTAAGTTCATGGATGCTAA
GAAGCTTCAAGGTAAAGGTAAGTCAGGCAAAGCAGATAAAGCGCTGGCCAAAATCCAGAAGCTCTATGGGATAGAATCGT
GCTTAAAAGGTGCGACTGTCGAAACACGAAAAGCAGAACGTCAACAGCATGCCAAGCCGATACTGGATGAGCTGTACGAC
TGGATGACGTCTCAACAAGTAATAAGCTCTAGTCCATTAGGAAAAGCGATTAAGTATACGCTCGGCCAATGGCCCAAGCT
CATCCGCTATATCGATGACGGTCATTTATCTATCGATAATAATCGTGCTGAACGCGCCATTAAACCGCTGGTCATTGGCA
GAAAAAATTGGCTGTTCTCAAACACACCAAATGGTGCTGATGCGAGCGCGATGCTTTACAGCATCGTCGAGACAGCGAAA
GCCAACGGCCTTATCCTCTACGACTACATGGTCAAGTGCATGAAAGAGCTCGCGAAAGCTGAGCCTGATATCGATGCGCT
CCTACCTTGGAACTTCAAACATTAA

Upstream 100 bases:

>100_bases
GCCATAAACCCGTTCAAATAAACGATTTTACAATGACTTAATTGATAATAAAGCCTTATCTACCAAGCGTGAATGGCATG
ATTTTAGTATAATAAATGCC

Downstream 100 bases:

>100_bases
CAACACCGCCCCGTGGGTTCATGGGGCGCATACTATTAACTAGTTGTGTTTGAACGTTGGTAGTTAGGGTTTTAGGCGAG
CCTTCAATCTGAGCTCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFTPLY
AALKAHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQQHAKPILDELYD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH

Sequences:

>Translated_514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFTPLY
AALKAHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQQHAKPILDELYD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
>Mature_514_residues
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAA
KEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYAC
RQCEQTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFTPLY
AALKAHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARVCPVAFLGDYSGYLQTDG
YGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQQHAKPILDELYD
WMTSQQVISSSPLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 58239; Mature: 58239

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKPYDESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHE
CCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCH
KQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQS
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEECCCCCCCC
IIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFTPLY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AALKAHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
ARVCPVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADK
CEEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALAKIQKLYGIESCLKGATVETRKAERQQHAKPILDELYDWMTSQQVISSSPLGKAIKYT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHC
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
CCCEEEHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MKKTPVINPESQDVAKLQAMVKALLLSQERKESQWKQERQSLLEQLKLAFDRQFAKRSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKPYDESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHE
CCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCH
KQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQS
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEECCCCCCCC
IIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFTPLY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AALKAHLLQQVVVQADETPLNVLKEDKQCYMWLYCSGADSPDAALPNVKNIALYDYQNSR
HHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
ARVCPVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADK
CEEEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALAKIQKLYGIESCLKGATVETRKAERQQHAKPILDELYDWMTSQQVISSSPLGKAIKYT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAK
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHC
ANGLILYDYMVKCMKELAKAEPDIDALLPWNFKH
CCCEEEHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]