| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978073
Identifier: 156978073
GI number: 156978073
Start: 1983075
End: 1983521
Strand: Reverse
Name: 156978073
Synonym: VIBHAR_06877
Alternate gene names: NA
Gene position: 1983521-1983075 (Counterclockwise)
Preceding gene: 156978074
Following gene: 156978069
Centisome position: 90.0
GC content: 37.14
Gene sequence:
>447_bases TTGTACATTTGGAAAACATCAAAGCTGTCTGAGGAACTAAAAGACAACAAAGTGCCAGACAGTGATTGGATAAAATACGC TTTAATATTCTTAATCTTTTATACGGTGACACCTTACTTGATGTTCTTGGCGCCGTATGTAAGCAATGAAGTTATGATAA CCGAGGCGATTGGTATCTTAGTCGTGTCAATTTTGGGTGTAATAGTCACGTATAGAACGAATAATAGAGATGGTAAAACC TACATTCTTCGCTCTATCGCTTTATCTATCCCTTTGTCGTTTAGATTTGTCGCTTTATCTGTGCTTGTTGGGATGGCTAT CGTCTCTTTCGACTTTGGCGCTCAACATTATTTTATCGTTGAATTACTTTCGACATTCTCTGTTATCGCTTTGCAAGCAC TCTATTTTTGGCGTTTGAATGTTCATTTAAAGTACATCAACTCTTAG
Upstream 100 bases:
>100_bases GGTTCATGGGGCGCATACTATTAACTAGTTGTGTTTGAACGTTGGTAGTTAGGGTTTTAGGCGAGCCTTCAATCTGAGCT CACATAAAAGGAATAATAAT
Downstream 100 bases:
>100_bases CTTTGTACTTTCTACTTTGATTACAGGCTTTGTGATTAGGCATAAGACTGACTGACGATGAGCTCTCTTAGCCACTTGTG GCTTGGGTCATTGTCGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MYIWKTSKLSEELKDNKVPDSDWIKYALIFLIFYTVTPYLMFLAPYVSNEVMITEAIGILVVSILGVIVTYRTNNRDGKT YILRSIALSIPLSFRFVALSVLVGMAIVSFDFGAQHYFIVELLSTFSVIALQALYFWRLNVHLKYINS
Sequences:
>Translated_148_residues MYIWKTSKLSEELKDNKVPDSDWIKYALIFLIFYTVTPYLMFLAPYVSNEVMITEAIGILVVSILGVIVTYRTNNRDGKT YILRSIALSIPLSFRFVALSVLVGMAIVSFDFGAQHYFIVELLSTFSVIALQALYFWRLNVHLKYINS >Mature_148_residues MYIWKTSKLSEELKDNKVPDSDWIKYALIFLIFYTVTPYLMFLAPYVSNEVMITEAIGILVVSILGVIVTYRTNNRDGKT YILRSIALSIPLSFRFVALSVLVGMAIVSFDFGAQHYFIVELLSTFSVIALQALYFWRLNVHLKYINS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17021; Mature: 17021
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIWKTSKLSEELKDNKVPDSDWIKYALIFLIFYTVTPYLMFLAPYVSNEVMITEAIGIL CCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVSILGVIVTYRTNNRDGKTYILRSIALSIPLSFRFVALSVLVGMAIVSFDFGAQHYFIV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELLSTFSVIALQALYFWRLNVHLKYINS HHHHHHHHHHHHHHHHHHHEEEEEEECC >Mature Secondary Structure MYIWKTSKLSEELKDNKVPDSDWIKYALIFLIFYTVTPYLMFLAPYVSNEVMITEAIGIL CCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVSILGVIVTYRTNNRDGKTYILRSIALSIPLSFRFVALSVLVGMAIVSFDFGAQHYFIV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELLSTFSVIALQALYFWRLNVHLKYINS HHHHHHHHHHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA