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The map label for this gene is 156978009

Identifier: 156978009

GI number: 156978009

Start: 1922999

End: 1924291

Strand: Reverse

Name: 156978009

Synonym: VIBHAR_06806

Alternate gene names: NA

Gene position: 1924291-1922999 (Counterclockwise)

Preceding gene: 156978010

Following gene: 156978008

Centisome position: 87.31

GC content: 42.61

Gene sequence:

>1293_bases
ATGATCGTGGTCGATAAGCTATTAACAGGCTTTGATGAGCCTAAAAACACAGTGCTCTACATCGATAAGCCGTTAAAGCA
GCACAATCTTATTCAAGCCATTGCGCGAGTTAACCGCTTACATACGAAAAAGCAATTTGGTTATTTGATTGATTACCGTG
GCATCTTACGTGAATTGGATACCACTATTGAGAAATACCAAGATTTAGCTGAGCGTACCCAAGGTGGCTTTGATATCGAT
GATCTCAAAGGTTTATATAACCGCATGGATACCGAGTACAAGAAGTTACCAGGTTTGTATGATGACCTATGGGCAATTTT
TTCTGGAGTGAAGAACAAGCAAGATGGCCAAGCACTGCGTCAAGCTTTGGCACCTAAAATTGATACGATTGATGGTCAAC
TGACAGATACCAACTTAAAGCTGCGTAATGATTTTTATGATGCGCTGACTGCGTTTGCTAACTGCTTAAAAGTAGCTCTG
CAATCGGCTACTTACTTTGAAGATAAGAGCTTTGATGATAAGCGTCAGCTTTATAAAAACACGTTGAAATCTATGAGCCA
ACTGCGTCAACAAGTACGTGCAGATGCAGAGGAAACCGTGGACTACGACGAGTATTCGGAAAATATTCGCGCCATGTTAG
ACAAGCACATTGCAGGTGTGTCTATTGAAGAGCCAGAAGGCGCTTATCTAGTTGGCAACATGGGTAAAGATGCCAAACCA
GAGCAAATGACCGATGATGAAGCCAATAACAAAAAGGATGTCATCACAGGTCGTGTAACCAAGATGATTGAGCAAGATTT
GGCGGATGATCCGTATGCGCAAGAGTATTTCTCAAACTTGTTAAAGCAAGCTATCGAGAAAACCAAGGAGATGTTTGATA
GCCCTGTAAAACAGTACCTTCTGTTTGCAGATTTCGAGCAGCAGGTTAAAGATCGAGAGGTAGCTGGAATGCCGACCGAT
CGCTTCGCAGAACTTGACCCTAAAATAAAACGCCATGTTCAAGCTTACTATGGTCTGTTCTTAAAACATGGGTTGCTAAA
AGAAAATGGGGGAGAGCCGTTACCTCTAACCGAAGAGCAATGCTTTCAATATGCGTTAGACATTGATGGCATTGTGCGTA
AGGCGGTTGCCGAGTTTTCAATTAACCCATCAGAGATTGAAAACCAGATCCGTTTAGGACTGCTGCCACTGCTGTTTAAT
GATGTTGGTATCGACAAAGCGCAAGCCATTATCACAGATGTCATTCAGATCACCCGTCTTGGCCTGTCTGGTAACAATAA
GTCAGGTCACTAA

Upstream 100 bases:

>100_bases
TTGGTGGAAAGAGAACGTCGCACAGAAAGGCTGGAGCGATGAAAAAGCCTAAACCAAGCACATCATCCAAGAATTTGAAA
AGGATGAAGGCCCCGACATT

Downstream 100 bases:

>100_bases
GCATGACTTCGGTTAATCATCAAGAAGGCAATACAGAGGAATACAGCTTCATCTATTGTGATGAAGCTGTTACCTATGAA
GTGATCCGCAAGGTATTTGC

Product: type I restriction enzyme restriction subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHTKKQFGYLIDYRGILRELDTTIEKYQDLAERTQGGFDID
DLKGLYNRMDTEYKKLPGLYDDLWAIFSGVKNKQDGQALRQALAPKIDTIDGQLTDTNLKLRNDFYDALTAFANCLKVAL
QSATYFEDKSFDDKRQLYKNTLKSMSQLRQQVRADAEETVDYDEYSENIRAMLDKHIAGVSIEEPEGAYLVGNMGKDAKP
EQMTDDEANNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEKTKEMFDSPVKQYLLFADFEQQVKDREVAGMPTD
RFAELDPKIKRHVQAYYGLFLKHGLLKENGGEPLPLTEEQCFQYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFN
DVGIDKAQAIITDVIQITRLGLSGNNKSGH

Sequences:

>Translated_430_residues
MIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHTKKQFGYLIDYRGILRELDTTIEKYQDLAERTQGGFDID
DLKGLYNRMDTEYKKLPGLYDDLWAIFSGVKNKQDGQALRQALAPKIDTIDGQLTDTNLKLRNDFYDALTAFANCLKVAL
QSATYFEDKSFDDKRQLYKNTLKSMSQLRQQVRADAEETVDYDEYSENIRAMLDKHIAGVSIEEPEGAYLVGNMGKDAKP
EQMTDDEANNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEKTKEMFDSPVKQYLLFADFEQQVKDREVAGMPTD
RFAELDPKIKRHVQAYYGLFLKHGLLKENGGEPLPLTEEQCFQYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFN
DVGIDKAQAIITDVIQITRLGLSGNNKSGH
>Mature_430_residues
MIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHTKKQFGYLIDYRGILRELDTTIEKYQDLAERTQGGFDID
DLKGLYNRMDTEYKKLPGLYDDLWAIFSGVKNKQDGQALRQALAPKIDTIDGQLTDTNLKLRNDFYDALTAFANCLKVAL
QSATYFEDKSFDDKRQLYKNTLKSMSQLRQQVRADAEETVDYDEYSENIRAMLDKHIAGVSIEEPEGAYLVGNMGKDAKP
EQMTDDEANNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEKTKEMFDSPVKQYLLFADFEQQVKDREVAGMPTD
RFAELDPKIKRHVQAYYGLFLKHGLLKENGGEPLPLTEEQCFQYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFN
DVGIDKAQAIITDVIQITRLGLSGNNKSGH

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1214 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004473
- InterPro:   IPR006935
- InterPro:   IPR007409 [H]

Pfam domain/function: PF04313 HSDR_N; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 49032; Mature: 49032

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHTKKQFGYLIDYRGILRELD
CEEHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTIEKYQDLAERTQGGFDIDDLKGLYNRMDTEYKKLPGLYDDLWAIFSGVKNKQDGQALR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
QALAPKIDTIDGQLTDTNLKLRNDFYDALTAFANCLKVALQSATYFEDKSFDDKRQLYKN
HHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TLKSMSQLRQQVRADAEETVDYDEYSENIRAMLDKHIAGVSIEEPEGAYLVGNMGKDAKP
HHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCC
EQMTDDEANNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEKTKEMFDSPVKQYL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFADFEQQVKDREVAGMPTDRFAELDPKIKRHVQAYYGLFLKHGLLKENGGEPLPLTEEQ
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
CFQYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFNDVGIDKAQAIITDVIQITRL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLSGNNKSGH
CCCCCCCCCC
>Mature Secondary Structure
MIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHTKKQFGYLIDYRGILRELD
CEEHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTIEKYQDLAERTQGGFDIDDLKGLYNRMDTEYKKLPGLYDDLWAIFSGVKNKQDGQALR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
QALAPKIDTIDGQLTDTNLKLRNDFYDALTAFANCLKVALQSATYFEDKSFDDKRQLYKN
HHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TLKSMSQLRQQVRADAEETVDYDEYSENIRAMLDKHIAGVSIEEPEGAYLVGNMGKDAKP
HHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCC
EQMTDDEANNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEKTKEMFDSPVKQYL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFADFEQQVKDREVAGMPTDRFAELDPKIKRHVQAYYGLFLKHGLLKENGGEPLPLTEEQ
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
CFQYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFNDVGIDKAQAIITDVIQITRL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLSGNNKSGH
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]