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The map label for this gene is 156978010

Identifier: 156978010

GI number: 156978010

Start: 1924340

End: 1926304

Strand: Reverse

Name: 156978010

Synonym: VIBHAR_06807

Alternate gene names: NA

Gene position: 1926304-1924340 (Counterclockwise)

Preceding gene: 156978011

Following gene: 156978009

Centisome position: 87.4

GC content: 45.55

Gene sequence:

>1965_bases
ATGTCAGGCAACTTACCCAACTTCCGTGAAGAGCAAAGCGCAAAAATCCCTGCGCTAACCTTGCTCACTAACCTTGGCTA
CCAATTCATTCCACCGAGTGAATGCATGGCAATGCGTGGCAACAAAACCACGGTGATCTTGCCGCAGGTGTTACGCAAGG
TTCTGAGCTTTAAAACCTATTCATTTATGGGGAAAGATCGCCATTTATCGCAAGCTGCGATTGATAAAATCGTGCAAGAG
CTGGCTAACCCTGCGATGAATGAAGGGCTAAAAGCTGCCAATGAAAAACTCTATAACGCCTTAACTTATGGCATTAGTGT
GACTGAGTTTGTCGAGGGCAAAAAAGCCAACCCAACCATTCAAATCATTGATTGGGATACACCTGAAAACAACCAATTCC
ATTTCACAGAAGAGATGGTTATTGAAAATGCTCATGGTACAGGTATCCGTAAACCTGATATTGTTTGTTTTGTGAATGGC
TTGCCGTGGGTGGTAATAGAGGCGAAACGCCCTGATAGCAGCATCAATGGAAAACCCACTATCACAGAAGGTATTTCGCA
AAATATCCGCAACCAAAAAGTGGATGAAATCCCTCATCTGTTTGCTTACAGTCAACTGTTGTTATCCATCAATGGACATG
ATGGATTATACGGTATATGCGGCACACTTGATAAGTTCTGGGCGAAATGGAAAGAAGAAGAAATCAACGAAAACACCTTT
GAACGCCTCAAGAACACCCCACTGAATGACGCGCAACTGAATGTGATTTTTAGCCATCGTGCAGCAGCGATCAAAGACGA
ATATCTATCACTAATTGCAGGTGGTGATTTGGTGGTGACCGATCAAGATCGCCTGTTGGTATCTTTGCTGCGTCATGACC
GCTTGCTAGAGCTAACTCGTTTATTCACATTGTTTGATAAAAAAGCAGGCAAGATTGTTGCGCGTTATCAGCAAGTGTTT
GGCATTAAAGCCTTGGTGGAGCGCATCACCTCTTTTGATGAGAATGGAGCACGTAACGGCGGTGTGATTTGGCATACCAC
AGGTTCGGGTAAGTCTTTCACGATGGTGTTTTTGTCAAAAGCCCTGATTTGGCTAAAAGAGTTAGCGAAATGCCGCGTTG
TGGTTGTGACTGACCGTGTGGATTTAGAAGATCAGCTTGCTCGCACCTTTGCATCAGGTGGCGCACTGTCAGATAAAGAC
AAAAAAGAGGCGATGGCCACCACAGGTAAACGCCTTGCAGAGCAAATCGGTAAAGGCAATGAGCGCATCATTTTCTCGAT
CATCAACAAGTTTGGTACGGCGATTAACCTACCTGAATGCTACAACGATAGCCCAGACATTATCGTATTAGTGGATGAGG
GCCACCGTAGCCAAAACGGTGAGAACAACATCCGTATGCAGCAAGCTTTGCCAAAAGCGGCTTACATCGGTTTCACAGGT
ACACCTCTGCTGCAAGACGATAAAACCGAGAACAAGTTCGGTAAGATCATTCACTCTTACACCATGCAGCAAGCCGTCGA
AGATGGCACCGTCACCCCTTTGCTTTATGAAGAACGTATTCCAGATCTGAGCACCAACGACAAAGCCATTGATGCTTGGT
TTGACCGTATTACCGATACCCTATCGGAGAAGCAGCGTGCTGACTTAAAACGCAAGTTCGCACAAAAAGGTCAAATCTAT
CAAACCGAAGGGCGATTAGAGTTAATTGCGCACGATATTTCGGATCACTTCCAAAACTTTAAGCAGCAAGGTTTGAAGGG
GCAACTGGCTTGTGATTCTAAAGCCTCTGCAATCCGCTATAAGAAGCTGCTCGATCAAATCGGTAAAGTCACTTCTGTGG
TTGCGATGTCGCCACCTGATACCCGTGAGGGACACGATAGCGTCGATAGTGAAAGCTCCGATTTGGTGCAAAATTGGTGG
AAAGAGAACGTCGCACAGAAAGGCTGGAGCGATGAAAAAGCCTAA

Upstream 100 bases:

>100_bases
ATTCGCTCAAAGTATTGCATTCCCTTATCAATAATGCAGAAGTCAAAAGGTAATCAGCATTAAACAATGCGTAAAGATAC
AATAAAAAAATAGGACGACA

Downstream 100 bases:

>100_bases
ACCAAGCACATCATCCAAGAATTTGAAAAGGATGAAGGCCCCGACATTATGATCGTGGTCGATAAGCTATTAACAGGCTT
TGATGAGCCTAAAAACACAG

Product: type I restriction enzyme restriction subunit

Products: NA

Alternate protein names: Putative type I restriction enzyme MjaXP R protein [H]

Number of amino acids: Translated: 654; Mature: 653

Protein sequence:

>654_residues
MSGNLPNFREEQSAKIPALTLLTNLGYQFIPPSECMAMRGNKTTVILPQVLRKVLSFKTYSFMGKDRHLSQAAIDKIVQE
LANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANPTIQIIDWDTPENNQFHFTEEMVIENAHGTGIRKPDIVCFVNG
LPWVVIEAKRPDSSINGKPTITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGICGTLDKFWAKWKEEEINENTF
ERLKNTPLNDAQLNVIFSHRAAAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLELTRLFTLFDKKAGKIVARYQQVF
GIKALVERITSFDENGARNGGVIWHTTGSGKSFTMVFLSKALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKD
KKEAMATTGKRLAEQIGKGNERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTG
TPLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRITDTLSEKQRADLKRKFAQKGQIY
QTEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAIRYKKLLDQIGKVTSVVAMSPPDTREGHDSVDSESSDLVQNWW
KENVAQKGWSDEKA

Sequences:

>Translated_654_residues
MSGNLPNFREEQSAKIPALTLLTNLGYQFIPPSECMAMRGNKTTVILPQVLRKVLSFKTYSFMGKDRHLSQAAIDKIVQE
LANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANPTIQIIDWDTPENNQFHFTEEMVIENAHGTGIRKPDIVCFVNG
LPWVVIEAKRPDSSINGKPTITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGICGTLDKFWAKWKEEEINENTF
ERLKNTPLNDAQLNVIFSHRAAAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLELTRLFTLFDKKAGKIVARYQQVF
GIKALVERITSFDENGARNGGVIWHTTGSGKSFTMVFLSKALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKD
KKEAMATTGKRLAEQIGKGNERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTG
TPLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRITDTLSEKQRADLKRKFAQKGQIY
QTEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAIRYKKLLDQIGKVTSVVAMSPPDTREGHDSVDSESSDLVQNWW
KENVAQKGWSDEKA
>Mature_653_residues
SGNLPNFREEQSAKIPALTLLTNLGYQFIPPSECMAMRGNKTTVILPQVLRKVLSFKTYSFMGKDRHLSQAAIDKIVQEL
ANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANPTIQIIDWDTPENNQFHFTEEMVIENAHGTGIRKPDIVCFVNGL
PWVVIEAKRPDSSINGKPTITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGICGTLDKFWAKWKEEEINENTFE
RLKNTPLNDAQLNVIFSHRAAAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLELTRLFTLFDKKAGKIVARYQQVFG
IKALVERITSFDENGARNGGVIWHTTGSGKSFTMVFLSKALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKDK
KEAMATTGKRLAEQIGKGNERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTGT
PLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRITDTLSEKQRADLKRKFAQKGQIYQ
TEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAIRYKKLLDQIGKVTSVVAMSPPDTREGHDSVDSESSDLVQNWWK
ENVAQKGWSDEKA

Specific function: Subunit R is required for both nuclease and ATPase activities, but not for modification [H]

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR021810
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR011254
- InterPro:   IPR004473
- InterPro:   IPR006935
- InterPro:   IPR007409 [H]

Pfam domain/function: PF11867 DUF3387; PF04313 HSDR_N; PF04851 ResIII [H]

EC number: =3.1.21.3 [H]

Molecular weight: Translated: 73384; Mature: 73253

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNLPNFREEQSAKIPALTLLTNLGYQFIPPSECMAMRGNKTTVILPQVLRKVLSFKTY
CCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHH
SFMGKDRHLSQAAIDKIVQELANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANPTI
HHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEE
QIIDWDTPENNQFHFTEEMVIENAHGTGIRKPDIVCFVNGLPWVVIEAKRPDSSINGKPT
EEEECCCCCCCCEEEHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCC
ITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGICGTLDKFWAKWKEEEINENTF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
ERLKNTPLNDAQLNVIFSHRAAAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLELTR
HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH
LFTLFDKKAGKIVARYQQVFGIKALVERITSFDENGARNGGVIWHTTGSGKSFTMVFLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEHHHHHHH
ALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKDKKEAMATTGKRLAEQIGKGN
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTG
CEEHHHHHHHHCCEECCHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEECCCC
TPLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRITDT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHHH
LSEKQRADLKRKFAQKGQIYQTEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAIRY
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH
KKLLDQIGKVTSVVAMSPPDTREGHDSVDSESSDLVQNWWKENVAQKGWSDEKA
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGNLPNFREEQSAKIPALTLLTNLGYQFIPPSECMAMRGNKTTVILPQVLRKVLSFKTY
CCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHH
SFMGKDRHLSQAAIDKIVQELANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANPTI
HHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEE
QIIDWDTPENNQFHFTEEMVIENAHGTGIRKPDIVCFVNGLPWVVIEAKRPDSSINGKPT
EEEECCCCCCCCEEEHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCC
ITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGICGTLDKFWAKWKEEEINENTF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
ERLKNTPLNDAQLNVIFSHRAAAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLELTR
HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH
LFTLFDKKAGKIVARYQQVFGIKALVERITSFDENGARNGGVIWHTTGSGKSFTMVFLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEHHHHHHH
ALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKDKKEAMATTGKRLAEQIGKGN
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGFTG
CEEHHHHHHHHCCEECCHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEECCCC
TPLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRITDT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHHH
LSEKQRADLKRKFAQKGQIYQTEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAIRY
HHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH
KKLLDQIGKVTSVVAMSPPDTREGHDSVDSESSDLVQNWWKENVAQKGWSDEKA
HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]