| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is fhuE [H]
Identifier: 156977965
GI number: 156977965
Start: 1891380
End: 1893452
Strand: Reverse
Name: fhuE [H]
Synonym: VIBHAR_06761
Alternate gene names: 156977965
Gene position: 1893452-1891380 (Counterclockwise)
Preceding gene: 156977966
Following gene: 156977964
Centisome position: 85.91
GC content: 45.78
Gene sequence:
>2073_bases ATGTTTACTAAGAGCCAATTGGCATTAGTGATCGGTGCGGTGCTAGCAGCGCCTGCAGTGGCAGAAGTTCAAACAACAGA TGAACACCTAGTAGTAGAAGGCCGTGAGTTTGGTTACAAAGCGGATACCAACAGCACAGCAATGCGTATGGAAATGACGC AGCTGGAAACTCCGGGGCAGGTTGCTGTGATCGATGAAGCAGTCATCGATGAGCAGCGTGCAAGTACACTAGGTGAGGTT CTACAAAATGACGCAAGTGTTAGCGCAGGTGGTACGAGCCGTAACCGTGAGCGCTTCTCACTACGTGGTTTTGAACTAAG CAGCTCGGATGGCTTCCTACGTGATGGACGTCAGCACTGGTCTCACTACCGTCAACCAATTGAGCTTTTAGAGCGAGTTG AAGTTCTTAAAGGACCTTCAGGCCTACTTTACGGTAAGTCTGAGCCGGGTGGCCTTGTGAACATGGTTTCGAAGAAGCCA ACAACAGAAACACAAGCAAGCTTGAGCCAAGATATTGGTTCAAATGATCACTCACGCACAGTATTAGATGTGAGTGGTGC CCTGAATGAAGAAGAAACGCTGCGTGCGCGTGCGATTCTTGCCAAAGAGAGCTACGGCTCATGGCGTGAATACGGTGATG GCACTGAGCCACAGACTGACCGCGTAGTAGGTGGTCTGGTTGTGGAATATGACATCACGGAAGATATTATGGTGTCGGCT CATTATGACCGTACTAAAGATGATGGTAGTGTTGATTCAGGTGCTTACATTGTGGACGGTAAGCCTGTGCTTGGAGACAA GTATATTTGGGATGCACAATGGTCGAAGATCGATAACGATGTAGAAAACTACGGTATCGACATTAACGCGCAAGTTACAG ATAACGTAAATGTGAAAGCGGGCTATAACCGTCAAGACTTTAAGCGCTTTGATGTGGAATCTTACCCGAGTTTCAGTAAA TACGCTCAAGATAACAAAATTATTCATTCAGGAAATGAACGTACAGATAATTGGGTATTTGATACGGCGTATTTAGATGT GACCACAGACTTTTCTCTACTTGGTAGTGAAAACACATTTTTGATTGGAGCTAACTATTTAGACTACAAATATGACCGTT TTCAAGAATACTACTCAACAGTAGAAATTGAACCTGGTCAGACTGTACCTCGCCCTGATTATTCAGGAAAAGTAAAAGAG TCTACATCTGAGTACGATACTTGGGGTATCTACGCGCAAAACATGATGACGATTAACGATCACTGGCAAGTGCTTGCAGG TGTTCGTTACGATGAAAAGCGTAGTGATACTCTGACGGAAAGCCAAGTGTCACCAAAGCTAGGTGTGATTTTCCACCCAG CAAGCAACGGTTCGGTGTACGTTCAGTATTCTGAAAGCTTTATGCCACAGGGCGAGGTCTCTAGTGGCCGTAAACTTTAT TCAAACGATGGTGAAGAGCTAGATGCAGAACGTGGTATCTCGTACGAAGTGGGTACCAAGTGGGAGCTATTTGACGAACG TCTACTAGTTTCCGGCGCTGTATTTGATATCACTCTGGAAAACGTAGCGTTAGATGTAAAAGACGGTGTTAATGCTGGTG GCGATGTGATGTACAAGAAAACGCAAGATGGTGAGCAAGTACACCGCGGTGCAGAAATCCTAGCGCAGGGCTTTGTAACT GAAGAGCTTTCACTAACGGCTTCTGCAATGTACCTAGATGCTGAAATCACTGAAAGTGCAGATTACAAAGGCAAGCGTCC GGCAGACGTTCCAGAGTTTTCAGCAAGTGTTTGGTCAAGCTACAAAGTTCAGAATAACACCAACGTTAACCTAGGTTTGA TTTATGAAGGTGAGCGCTACGGCGACGCGGCGAACACATTTAAGAAAGATGGGTATGCACGTATTGATATGGGCGTGTCG TACACACACAAGTATGATGAGAACTTGGATATCGTAACTCGATTCAATGTTGAGAACCTGTTTGATACTGACTACCTAGC AGGTGGAGAGAGGGACGGCGTAGTGATTGGCGAAGGCCGAAACTACATGGCGACTATCCAGTTCAAGTACTGA
Upstream 100 bases:
>100_bases TGCAAATGGTAATAGTTGTCATTTATATTCACTGCCGAAATAAATACAAGGGAATCACATCATAGAGTGTGCGACCCGAA AATAGTCGGAGTGAAAGGAT
Downstream 100 bases:
>100_bases TAACAATCTGATTTTTAAAGGGGAAGAGTGGTCTTCCCCTTTAGTCGTTTTTGGAAAACAGAAAATATAACTCGTATGAA TCTAATGAAATCAAGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MFTKSQLALVIGAVLAAPAVAEVQTTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQVAVIDEAVIDEQRASTLGEV LQNDASVSAGGTSRNRERFSLRGFELSSSDGFLRDGRQHWSHYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKP TTETQASLSQDIGSNDHSRTVLDVSGALNEEETLRARAILAKESYGSWREYGDGTEPQTDRVVGGLVVEYDITEDIMVSA HYDRTKDDGSVDSGAYIVDGKPVLGDKYIWDAQWSKIDNDVENYGIDINAQVTDNVNVKAGYNRQDFKRFDVESYPSFSK YAQDNKIIHSGNERTDNWVFDTAYLDVTTDFSLLGSENTFLIGANYLDYKYDRFQEYYSTVEIEPGQTVPRPDYSGKVKE STSEYDTWGIYAQNMMTINDHWQVLAGVRYDEKRSDTLTESQVSPKLGVIFHPASNGSVYVQYSESFMPQGEVSSGRKLY SNDGEELDAERGISYEVGTKWELFDERLLVSGAVFDITLENVALDVKDGVNAGGDVMYKKTQDGEQVHRGAEILAQGFVT EELSLTASAMYLDAEITESADYKGKRPADVPEFSASVWSSYKVQNNTNVNLGLIYEGERYGDAANTFKKDGYARIDMGVS YTHKYDENLDIVTRFNVENLFDTDYLAGGERDGVVIGEGRNYMATIQFKY
Sequences:
>Translated_690_residues MFTKSQLALVIGAVLAAPAVAEVQTTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQVAVIDEAVIDEQRASTLGEV LQNDASVSAGGTSRNRERFSLRGFELSSSDGFLRDGRQHWSHYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKP TTETQASLSQDIGSNDHSRTVLDVSGALNEEETLRARAILAKESYGSWREYGDGTEPQTDRVVGGLVVEYDITEDIMVSA HYDRTKDDGSVDSGAYIVDGKPVLGDKYIWDAQWSKIDNDVENYGIDINAQVTDNVNVKAGYNRQDFKRFDVESYPSFSK YAQDNKIIHSGNERTDNWVFDTAYLDVTTDFSLLGSENTFLIGANYLDYKYDRFQEYYSTVEIEPGQTVPRPDYSGKVKE STSEYDTWGIYAQNMMTINDHWQVLAGVRYDEKRSDTLTESQVSPKLGVIFHPASNGSVYVQYSESFMPQGEVSSGRKLY SNDGEELDAERGISYEVGTKWELFDERLLVSGAVFDITLENVALDVKDGVNAGGDVMYKKTQDGEQVHRGAEILAQGFVT EELSLTASAMYLDAEITESADYKGKRPADVPEFSASVWSSYKVQNNTNVNLGLIYEGERYGDAANTFKKDGYARIDMGVS YTHKYDENLDIVTRFNVENLFDTDYLAGGERDGVVIGEGRNYMATIQFKY >Mature_690_residues MFTKSQLALVIGAVLAAPAVAEVQTTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQVAVIDEAVIDEQRASTLGEV LQNDASVSAGGTSRNRERFSLRGFELSSSDGFLRDGRQHWSHYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKP TTETQASLSQDIGSNDHSRTVLDVSGALNEEETLRARAILAKESYGSWREYGDGTEPQTDRVVGGLVVEYDITEDIMVSA HYDRTKDDGSVDSGAYIVDGKPVLGDKYIWDAQWSKIDNDVENYGIDINAQVTDNVNVKAGYNRQDFKRFDVESYPSFSK YAQDNKIIHSGNERTDNWVFDTAYLDVTTDFSLLGSENTFLIGANYLDYKYDRFQEYYSTVEIEPGQTVPRPDYSGKVKE STSEYDTWGIYAQNMMTINDHWQVLAGVRYDEKRSDTLTESQVSPKLGVIFHPASNGSVYVQYSESFMPQGEVSSGRKLY SNDGEELDAERGISYEVGTKWELFDERLLVSGAVFDITLENVALDVKDGVNAGGDVMYKKTQDGEQVHRGAEILAQGFVT EELSLTASAMYLDAEITESADYKGKRPADVPEFSASVWSSYKVQNNTNVNLGLIYEGERYGDAANTFKKDGYARIDMGVS YTHKYDENLDIVTRFNVENLFDTDYLAGGERDGVVIGEGRNYMATIQFKY
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=742, Percent_Identity=25.4716981132075, Blast_Score=171, Evalue=2e-43, Organism=Escherichia coli, GI1786344, Length=297, Percent_Identity=29.96632996633, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1787024, Length=332, Percent_Identity=24.6987951807229, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76959; Mature: 76959
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKSQLALVIGAVLAAPAVAEVQTTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQ CCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECHHCCEECCCCCCEEEEEEHHCCCCCC VAVIDEAVIDEQRASTLGEVLQNDASVSAGGTSRNRERFSLRGFELSSSDGFLRDGRQHW EEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECEEECCCCCHHHCCHHHH SHYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKPTTETQASLSQDIGSNDHSRT HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEE VLDVSGALNEEETLRARAILAKESYGSWREYGDGTEPQTDRVVGGLVVEYDITEDIMVSA EEEECCCCCCHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEE HYDRTKDDGSVDSGAYIVDGKPVLGDKYIWDAQWSKIDNDVENYGIDINAQVTDNVNVKA CCCCCCCCCCCCCCEEEECCCCCCCCCEEECCHHHHCCCCHHHCCEEEEEEEECCEEEEE GYNRQDFKRFDVESYPSFSKYAQDNKIIHSGNERTDNWVFDTAYLDVTTDFSLLGSENTF CCCHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCEEEEEEEEEEECCEEEECCCCEE LIGANYLDYKYDRFQEYYSTVEIEPGQTVPRPDYSGKVKESTSEYDTWGIYAQNMMTIND EEECCHHCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC HWQVLAGVRYDEKRSDTLTESQVSPKLGVIFHPASNGSVYVQYSESFMPQGEVSSGRKLY CEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE SNDGEELDAERGISYEVGTKWELFDERLLVSGAVFDITLENVALDVKDGVNAGGDVMYKK CCCCCCCHHHCCCEEECCCCHHHHHCCCEECCEEEEEEEEEEEEEECCCCCCCCCEEEEE TQDGEQVHRGAEILAQGFVTEELSLTASAMYLDAEITESADYKGKRPADVPEFSASVWSS CCCHHHHHHHHHHHHHCCCHHHHHEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCC YKVQNNTNVNLGLIYEGERYGDAANTFKKDGYARIDMGVSYTHKYDENLDIVTRFNVENL EEECCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEECHHHH FDTDYLAGGERDGVVIGEGRNYMATIQFKY CCCHHCCCCCCCCEEEECCCCEEEEEEEEC >Mature Secondary Structure MFTKSQLALVIGAVLAAPAVAEVQTTDEHLVVEGREFGYKADTNSTAMRMEMTQLETPGQ CCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECHHCCEECCCCCCEEEEEEHHCCCCCC VAVIDEAVIDEQRASTLGEVLQNDASVSAGGTSRNRERFSLRGFELSSSDGFLRDGRQHW EEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECEEECCCCCHHHCCHHHH SHYRQPIELLERVEVLKGPSGLLYGKSEPGGLVNMVSKKPTTETQASLSQDIGSNDHSRT HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEE VLDVSGALNEEETLRARAILAKESYGSWREYGDGTEPQTDRVVGGLVVEYDITEDIMVSA EEEECCCCCCHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEEE HYDRTKDDGSVDSGAYIVDGKPVLGDKYIWDAQWSKIDNDVENYGIDINAQVTDNVNVKA CCCCCCCCCCCCCCEEEECCCCCCCCCEEECCHHHHCCCCHHHCCEEEEEEEECCEEEEE GYNRQDFKRFDVESYPSFSKYAQDNKIIHSGNERTDNWVFDTAYLDVTTDFSLLGSENTF CCCHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCEEEEEEEEEEECCEEEECCCCEE LIGANYLDYKYDRFQEYYSTVEIEPGQTVPRPDYSGKVKESTSEYDTWGIYAQNMMTIND EEECCHHCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC HWQVLAGVRYDEKRSDTLTESQVSPKLGVIFHPASNGSVYVQYSESFMPQGEVSSGRKLY CEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE SNDGEELDAERGISYEVGTKWELFDERLLVSGAVFDITLENVALDVKDGVNAGGDVMYKK CCCCCCCHHHCCCEEECCCCHHHHHCCCEECCEEEEEEEEEEEEEECCCCCCCCCEEEEE TQDGEQVHRGAEILAQGFVTEELSLTASAMYLDAEITESADYKGKRPADVPEFSASVWSS CCCHHHHHHHHHHHHHCCCHHHHHEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCC YKVQNNTNVNLGLIYEGERYGDAANTFKKDGYARIDMGVSYTHKYDENLDIVTRFNVENL EEECCCCCEEEEEEECCCCCCCHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEECHHHH FDTDYLAGGERDGVVIGEGRNYMATIQFKY CCCHHCCCCCCCCEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]