| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is cpxA [H]
Identifier: 156977966
GI number: 156977966
Start: 1893659
End: 1895032
Strand: Reverse
Name: cpxA [H]
Synonym: VIBHAR_06762
Alternate gene names: 156977966
Gene position: 1895032-1893659 (Counterclockwise)
Preceding gene: 156977967
Following gene: 156977965
Centisome position: 85.98
GC content: 44.69
Gene sequence:
>1374_bases ATGAAGTTCGTTTGCCCATCCTACATCGCTAAGCGCAGAGACAGTCTTGCCTTTCAGCTCTTTAGTTATATGACGGCTAT TGTCATTAGCATTTTGGCTGTTCAAGCGGTTGCAGAACAAGCTTTGGTGAAAGCCATGCTTAAAGTGCCAGCGAGTGTAA AAGTTGAAATGCTAGAGCTCGCTCATCAGGCAAATATCCTCATTGAGGAAGGCGACATGGATGAACTAGCGGACTGGGCA AATGCACAACACTTCTATCTATTCGTGCTCGACGAAAACCAACATCCGTTGACGCACCGTATGATGCACCCTCACTTTGA GTTCAAATTAAAATTCAAAAGAAGCTTGGACGAGCAACTAGAAGACCGAGTAAGTCGCCCAATATTTAGCATCCCTTTGG TTGGCAATAACAGCTTGATGATCCAATTGCCACACCAACTACATCCGGCACATGATTTCATTCTTTATTTTTCTATTCTA AAGGTTGTGATTGCTGGAGTGATATTGGCACTGTTTTCATTGCTGATGGCGCGTAATCTACAGCAGCCTTTGGACCGATT GAGAGAGGCGAGCAAGAAGCTTTCTAATGGTGACTTCAATGTCAGTGTGGTAGATGAGTTGAAATCGAATACGCGAGAAT TTAATGAACTCGCGCGAGATTTTGACCACATGACCAAAGAGATCCATTCATTGGCGGAGAAGCAGCGCCGGTTAATTCGT GATGTTTCCCATGAATTGCGTACGCCTCTTGCTCGACAAAATCTCGTGCTGCATCTATTGCGAAAGCGAGTCGGTGACAG TGAACAGAGCTTAGTGAATCGAATGGAAGAAGAAGCCAATGAACTTAACCACTTGATTGGCGAGATTCTGGAGTTCAGCC GATTAGAGAATGCTCGTTACGATACAGAGCTAAAGCGCATTGATCTCGAGGTCTTGCTTGCTCCTCAAGTGGAACGATGC AAGATAGATTTAAAAGCTCAGCAGAGCCTTTCATTTGTTTCAGACGCGACAAGGGCTAAGGCTCAATGTGATGACACTTT AGTGGTGCGATGCTTAAACAATCTGATTGGTAATGCGATTAAGTATGCAGGGGACTCTGCTCAAATAGAAGTTCGCTTAT CGAATAAAGCTTCTGATACACAGAGTTACTTGGCGGTAACGATTTCTGACAACGGTCCTGGTATTCCACAAAATAAGTTG TCAGATATATTCGACCCATTCACTCGTTTAGATGCCTCTCGTGACAAGAAGTTAGGTGGCTATGGTCTAGGGCTAGCGAT AGTCAAAGAGTCGATGAGAATGATGGGGGGCAAGGCTGTCGCATCAAATAGACCTGAAGGTGGACTTGCCGTTACTTTGC TGTTTCGGCAGTAA
Upstream 100 bases:
>100_bases GCAATATTCGTCGAAAATTAGTGGAAGCTGGCTTGTCCAAACAGCATATAAAAACGTTTCGTGGGAAAGGCTACAGCTAC CTTGAAGCGGTAACGAGTTA
Downstream 100 bases:
>100_bases GCGAAATCACGCTCACGAGTAATAATGTGACTCGCATCTAGTTCATGAATCAAATTGAACACGGCCTCTTTACAAATCTT TACGAATGCAAAGAATGTAA
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKFVCPSYIAKRRDSLAFQLFSYMTAIVISILAVQAVAEQALVKAMLKVPASVKVEMLELAHQANILIEEGDMDELADWA NAQHFYLFVLDENQHPLTHRMMHPHFEFKLKFKRSLDEQLEDRVSRPIFSIPLVGNNSLMIQLPHQLHPAHDFILYFSIL KVVIAGVILALFSLLMARNLQQPLDRLREASKKLSNGDFNVSVVDELKSNTREFNELARDFDHMTKEIHSLAEKQRRLIR DVSHELRTPLARQNLVLHLLRKRVGDSEQSLVNRMEEEANELNHLIGEILEFSRLENARYDTELKRIDLEVLLAPQVERC KIDLKAQQSLSFVSDATRAKAQCDDTLVVRCLNNLIGNAIKYAGDSAQIEVRLSNKASDTQSYLAVTISDNGPGIPQNKL SDIFDPFTRLDASRDKKLGGYGLGLAIVKESMRMMGGKAVASNRPEGGLAVTLLFRQ
Sequences:
>Translated_457_residues MKFVCPSYIAKRRDSLAFQLFSYMTAIVISILAVQAVAEQALVKAMLKVPASVKVEMLELAHQANILIEEGDMDELADWA NAQHFYLFVLDENQHPLTHRMMHPHFEFKLKFKRSLDEQLEDRVSRPIFSIPLVGNNSLMIQLPHQLHPAHDFILYFSIL KVVIAGVILALFSLLMARNLQQPLDRLREASKKLSNGDFNVSVVDELKSNTREFNELARDFDHMTKEIHSLAEKQRRLIR DVSHELRTPLARQNLVLHLLRKRVGDSEQSLVNRMEEEANELNHLIGEILEFSRLENARYDTELKRIDLEVLLAPQVERC KIDLKAQQSLSFVSDATRAKAQCDDTLVVRCLNNLIGNAIKYAGDSAQIEVRLSNKASDTQSYLAVTISDNGPGIPQNKL SDIFDPFTRLDASRDKKLGGYGLGLAIVKESMRMMGGKAVASNRPEGGLAVTLLFRQ >Mature_457_residues MKFVCPSYIAKRRDSLAFQLFSYMTAIVISILAVQAVAEQALVKAMLKVPASVKVEMLELAHQANILIEEGDMDELADWA NAQHFYLFVLDENQHPLTHRMMHPHFEFKLKFKRSLDEQLEDRVSRPIFSIPLVGNNSLMIQLPHQLHPAHDFILYFSIL KVVIAGVILALFSLLMARNLQQPLDRLREASKKLSNGDFNVSVVDELKSNTREFNELARDFDHMTKEIHSLAEKQRRLIR DVSHELRTPLARQNLVLHLLRKRVGDSEQSLVNRMEEEANELNHLIGEILEFSRLENARYDTELKRIDLEVLLAPQVERC KIDLKAQQSLSFVSDATRAKAQCDDTLVVRCLNNLIGNAIKYAGDSAQIEVRLSNKASDTQSYLAVTISDNGPGIPQNKL SDIFDPFTRLDASRDKKLGGYGLGLAIVKESMRMMGGKAVASNRPEGGLAVTLLFRQ
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=31.6546762589928, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1787894, Length=293, Percent_Identity=31.0580204778157, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788393, Length=285, Percent_Identity=25.9649122807018, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1786912, Length=214, Percent_Identity=29.4392523364486, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=27.0642201834862, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789149, Length=257, Percent_Identity=29.1828793774319, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790551, Length=296, Percent_Identity=26.0135135135135, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787374, Length=340, Percent_Identity=25.5882352941176, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI87082128, Length=304, Percent_Identity=24.0131578947368, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786783, Length=300, Percent_Identity=24.6666666666667, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789808, Length=356, Percent_Identity=23.314606741573, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI145693157, Length=241, Percent_Identity=26.1410788381743, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788279, Length=294, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=25.7777777777778, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790861, Length=216, Percent_Identity=28.2407407407407, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994928, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI87081816, Length=250, Percent_Identity=24.8, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=27.6785714285714, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51752; Mature: 51752
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVCPSYIAKRRDSLAFQLFSYMTAIVISILAVQAVAEQALVKAMLKVPASVKVEMLEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AHQANILIEEGDMDELADWANAQHFYLFVLDENQHPLTHRMMHPHFEFKLKFKRSLDEQL HHHCCEEEECCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCCHHEEEHHHHHHHHHH EDRVSRPIFSIPLVGNNSLMIQLPHQLHPAHDFILYFSILKVVIAGVILALFSLLMARNL HHHHCCCEEEEEEECCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQPLDRLREASKKLSNGDFNVSVVDELKSNTREFNELARDFDHMTKEIHSLAEKQRRLIR HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSHELRTPLARQNLVLHLLRKRVGDSEQSLVNRMEEEANELNHLIGEILEFSRLENARY HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DTELKRIDLEVLLAPQVERCKIDLKAQQSLSFVSDATRAKAQCDDTLVVRCLNNLIGNAI HHHHHHHHHHEEECCCHHHHEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KYAGDSAQIEVRLSNKASDTQSYLAVTISDNGPGIPQNKLSDIFDPFTRLDASRDKKLGG HHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC YGLGLAIVKESMRMMGGKAVASNRPEGGLAVTLLFRQ CHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MKFVCPSYIAKRRDSLAFQLFSYMTAIVISILAVQAVAEQALVKAMLKVPASVKVEMLEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AHQANILIEEGDMDELADWANAQHFYLFVLDENQHPLTHRMMHPHFEFKLKFKRSLDEQL HHHCCEEEECCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCCHHEEEHHHHHHHHHH EDRVSRPIFSIPLVGNNSLMIQLPHQLHPAHDFILYFSILKVVIAGVILALFSLLMARNL HHHHCCCEEEEEEECCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQPLDRLREASKKLSNGDFNVSVVDELKSNTREFNELARDFDHMTKEIHSLAEKQRRLIR HHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVSHELRTPLARQNLVLHLLRKRVGDSEQSLVNRMEEEANELNHLIGEILEFSRLENARY HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DTELKRIDLEVLLAPQVERCKIDLKAQQSLSFVSDATRAKAQCDDTLVVRCLNNLIGNAI HHHHHHHHHHEEECCCHHHHEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KYAGDSAQIEVRLSNKASDTQSYLAVTISDNGPGIPQNKLSDIFDPFTRLDASRDKKLGG HHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC YGLGLAIVKESMRMMGGKAVASNRPEGGLAVTLLFRQ CHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]