| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977953
Identifier: 156977953
GI number: 156977953
Start: 1881918
End: 1882412
Strand: Reverse
Name: 156977953
Synonym: VIBHAR_06749
Alternate gene names: NA
Gene position: 1882412-1881918 (Counterclockwise)
Preceding gene: 156977954
Following gene: 156977952
Centisome position: 85.41
GC content: 48.28
Gene sequence:
>495_bases ATGGCTTTGATTGCAGCTTTAGCTCCTTTGCCTCTATTGGCTGCGCCTTTACCTGACAGCGCAAAAGTCGATTTTGAGTT TGAGTTACCCAAAATTGATACCTCAATGTATGCACGCCCTTATGTGGCACTTTGGATTGAGGATGAGAAACGCAAACCAG TGAAAACCATCCAGCTTTGGGTCGGTAAAGATGAATGGCTGAAAGATCTTCGTAGCTGGTGGCGCAAAGTAGGTCGTTAC GATCGTGAACTGGTTGATGCGGTGACATCAGCAACTCGCCCGGCAGGTCAATATCGCTTTGTTTGGGATGGTACCAACGA CGATGGTCAGCGCCTTGAGCAAGGTGATTACACGCTCCATGTGGAAGTGGTGCGCGAGCATGGTGGTCGTAACTACCTGC GTCAAAAAATTCAGTTAGCGGACAAAGAAGCACGCTACCAAATCAAACCAACGGAAGAGACGGGCGTAATCACCGTCAAT TACCAAGTTAAGTGA
Upstream 100 bases:
>100_bases TCACTTATTATTTATTTTGCTGCTGTGCCATAGCGGCCTATTCAGAGAAAACCCGATGTTAAAAAAAGGCCGATCCTTTC GTCACCACTCCTTTTGCAAA
Downstream 100 bases:
>100_bases TAGAGAAGGAATAATAATGAAAACCAAAATGAAAGCGGTGGCACTAGCAAGCGCAATGGCGATGGGGTTAGCTGCGGCGA CAACGGCACAAGCGCACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MALIAALAPLPLLAAPLPDSAKVDFEFELPKIDTSMYARPYVALWIEDEKRKPVKTIQLWVGKDEWLKDLRSWWRKVGRY DRELVDAVTSATRPAGQYRFVWDGTNDDGQRLEQGDYTLHVEVVREHGGRNYLRQKIQLADKEARYQIKPTEETGVITVN YQVK
Sequences:
>Translated_164_residues MALIAALAPLPLLAAPLPDSAKVDFEFELPKIDTSMYARPYVALWIEDEKRKPVKTIQLWVGKDEWLKDLRSWWRKVGRY DRELVDAVTSATRPAGQYRFVWDGTNDDGQRLEQGDYTLHVEVVREHGGRNYLRQKIQLADKEARYQIKPTEETGVITVN YQVK >Mature_163_residues ALIAALAPLPLLAAPLPDSAKVDFEFELPKIDTSMYARPYVALWIEDEKRKPVKTIQLWVGKDEWLKDLRSWWRKVGRYD RELVDAVTSATRPAGQYRFVWDGTNDDGQRLEQGDYTLHVEVVREHGGRNYLRQKIQLADKEARYQIKPTEETGVITVNY QVK
Specific function: Unknown
COG id: COG3656
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19032; Mature: 18901
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIAALAPLPLLAAPLPDSAKVDFEFELPKIDTSMYARPYVALWIEDEKRKPVKTIQLW CCHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEE VGKDEWLKDLRSWWRKVGRYDRELVDAVTSATRPAGQYRFVWDGTNDDGQRLEQGDYTLH ECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEE VEVVREHGGRNYLRQKIQLADKEARYQIKPTEETGVITVNYQVK EEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEC >Mature Secondary Structure ALIAALAPLPLLAAPLPDSAKVDFEFELPKIDTSMYARPYVALWIEDEKRKPVKTIQLW CHHHHHCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEE VGKDEWLKDLRSWWRKVGRYDRELVDAVTSATRPAGQYRFVWDGTNDDGQRLEQGDYTLH ECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCEEEE VEVVREHGGRNYLRQKIQLADKEARYQIKPTEETGVITVNYQVK EEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA