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The map label for this gene is 156977954

Identifier: 156977954

GI number: 156977954

Start: 1882480

End: 1882965

Strand: Reverse

Name: 156977954

Synonym: VIBHAR_06750

Alternate gene names: NA

Gene position: 1882965-1882480 (Counterclockwise)

Preceding gene: 156977957

Following gene: 156977953

Centisome position: 85.43

GC content: 45.47

Gene sequence:

>486_bases
GTGAACAGCGCTTCATGCGACTTCACGTCGCACGAACAACTCTTTGCTAACGAGGGAAGCTTCCAACCTAATCGCTCTGC
CCTGTTGAGTTTCTTAAAACAAGAAACAGACTTACGAGGCACGCCATCAGCACTTGATGTGTACACCGAGGTTGAGGACG
GTGAGCTGCTCATTGGTGAGCTTTCTTTGGATTTCAAAGGTCCAGGTTACAACGCGACAGTATTCGTTGATATGACGACC
GGTGAAGCTGAAGTTGAAAGCACCAACTACGGCACTGTTGCGCTATTAAACGACCTACATAAAGGCCGAAACAGCGGAGA
GGTTTGGAAGTGGTTTATTGATATCACTGCCTTGCTGATGGTCTTTTTTGTTTTGACTGGTGTGTGTCTGCTACTTCCAA
AGAAAAAGACTTTTAGAACCTCAATGCAGTGGATGTCTTTTGGCACTGTGTTGTCACTTATTATTTATTTTGCTGCTGTG
CCATAG

Upstream 100 bases:

>100_bases
CCGTTTGGCACAGTGCCAAACTTCGTTACATTGTCAGGCTCGCTGCTTTATTCAGAGCCTTAGGGTCGTCTGGTGATACA
AACGGTTCACTCTTATCGCG

Downstream 100 bases:

>100_bases
CGGCCTATTCAGAGAAAACCCGATGTTAAAAAAAGGCCGATCCTTTCGTCACCACTCCTTTTGCAAAATGGCTTTGATTG
CAGCTTTAGCTCCTTTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Membrane-Associated Protein; Plasmolipin; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNSASCDFTSHEQLFANEGSFQPNRSALLSFLKQETDLRGTPSALDVYTEVEDGELLIGELSLDFKGPGYNATVFVDMTT
GEAEVESTNYGTVALLNDLHKGRNSGEVWKWFIDITALLMVFFVLTGVCLLLPKKKTFRTSMQWMSFGTVLSLIIYFAAV
P

Sequences:

>Translated_161_residues
MNSASCDFTSHEQLFANEGSFQPNRSALLSFLKQETDLRGTPSALDVYTEVEDGELLIGELSLDFKGPGYNATVFVDMTT
GEAEVESTNYGTVALLNDLHKGRNSGEVWKWFIDITALLMVFFVLTGVCLLLPKKKTFRTSMQWMSFGTVLSLIIYFAAV
P
>Mature_161_residues
MNSASCDFTSHEQLFANEGSFQPNRSALLSFLKQETDLRGTPSALDVYTEVEDGELLIGELSLDFKGPGYNATVFVDMTT
GEAEVESTNYGTVALLNDLHKGRNSGEVWKWFIDITALLMVFFVLTGVCLLLPKKKTFRTSMQWMSFGTVLSLIIYFAAV
P

Specific function: Unknown

COG id: COG3295

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17867; Mature: 17867

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSASCDFTSHEQLFANEGSFQPNRSALLSFLKQETDLRGTPSALDVYTEVEDGELLIGE
CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCEEEEE
LSLDFKGPGYNATVFVDMTTGEAEVESTNYGTVALLNDLHKGRNSGEVWKWFIDITALLM
EEEEECCCCCCEEEEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VFFVLTGVCLLLPKKKTFRTSMQWMSFGTVLSLIIYFAAVP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSASCDFTSHEQLFANEGSFQPNRSALLSFLKQETDLRGTPSALDVYTEVEDGELLIGE
CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCEEEEE
LSLDFKGPGYNATVFVDMTTGEAEVESTNYGTVALLNDLHKGRNSGEVWKWFIDITALLM
EEEEECCCCCCEEEEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VFFVLTGVCLLLPKKKTFRTSMQWMSFGTVLSLIIYFAAVP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA