Click here to switch to the map view.

The map label for this gene is 156977946

Identifier: 156977946

GI number: 156977946

Start: 1876667

End: 1877536

Strand: Reverse

Name: 156977946

Synonym: VIBHAR_06742

Alternate gene names: NA

Gene position: 1877536-1876667 (Counterclockwise)

Preceding gene: 156977947

Following gene: 156977945

Centisome position: 85.19

GC content: 45.06

Gene sequence:

>870_bases
ATGAACACGAAAAAGCTAATCATCGGGTTGGGCTTAATAGCAACGAGCGCATATACGCCACTTACTGTTGCTAAAGATAT
TCTCACCAGTACCCCTGTTACTTACATGCTGTCACAGCAGTTGATGCAAGGCACAGGCATTGAAACCAGTTACTTACCAC
CTAAGCGATATGGCATTGAGCGTTTAGTTAACTGGTTTGGGAGCAAGGGTCAGCAACAAGTGATTAAAGCGGGTCAGGAT
GCAACGGTGGCGATCTCGTTGGGGGCTATTTGGCATCAAGATCCTACCTTTGTTTACGCTCGTCAGGGTAACGTACGTTT
GATTGAAATTGATGCTTCCCAGGCGATTTCGCCAAGGGCGCAAGGGGTTGCAGCGTTGAAACTAGAAAATGGTGAAACGT
CTAAATTTGCGTGGATGAACCCGACGAACTTGATTCGGATGGCTGCCATCGTTGGTGAGGATCTGCAAAAAGTGTATCCT
CAGTATCAGACTCAGATAGAGAAGAACCAGCAAGCTCTAATGCTAGATGTACGTGAACTGATCAATCAGCAGCAAGGCGT
TATTTTCGAAAAAGAGATCGATTCGGTGGTATTGTTGGGTGAATCGTTAGAAGATTTCGCATCAGGTAATCAGTTGTTTG
TTGTTGACCGCCAATTTAAACCTGAATTGGAATGGTCCGAAGCAGAGAAACTATCTTTAAAAGCTCAATTTGAGGAAGAT
GAAACTCTGTGGCTGCTCACCAGTAGACGTCCGTCGAAAACGTTAATTTCATTGGTTTCACGGGGTCGCATACTGCAAAT
TGATGTTATTGACCGATGGGGCAATAAAGGTATCAAAACTGAGAAGCCACTCGCACGCTGGCAGTTGTAA

Upstream 100 bases:

>100_bases
CGGTGCCATCTGGCGCTTCGATCATTATTGTTTCTGCCATTTTCTTCTTAACCGCAACGATGTACCGCATCGTACGTAAA
GCTTAGTCAGGTATCTAAAT

Downstream 100 bases:

>100_bases
CACGAAAAACACCACGAAATTTATGAAGGGAACTGAAAAGTTCCCTTTTTTTATGAGAGCTAGATCAAAAAGCAATCACA
AATACTACCTGTTGCATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNTKKLIIGLGLIATSAYTPLTVAKDILTSTPVTYMLSQQLMQGTGIETSYLPPKRYGIERLVNWFGSKGQQQVIKAGQD
ATVAISLGAIWHQDPTFVYARQGNVRLIEIDASQAISPRAQGVAALKLENGETSKFAWMNPTNLIRMAAIVGEDLQKVYP
QYQTQIEKNQQALMLDVRELINQQQGVIFEKEIDSVVLLGESLEDFASGNQLFVVDRQFKPELEWSEAEKLSLKAQFEED
ETLWLLTSRRPSKTLISLVSRGRILQIDVIDRWGNKGIKTEKPLARWQL

Sequences:

>Translated_289_residues
MNTKKLIIGLGLIATSAYTPLTVAKDILTSTPVTYMLSQQLMQGTGIETSYLPPKRYGIERLVNWFGSKGQQQVIKAGQD
ATVAISLGAIWHQDPTFVYARQGNVRLIEIDASQAISPRAQGVAALKLENGETSKFAWMNPTNLIRMAAIVGEDLQKVYP
QYQTQIEKNQQALMLDVRELINQQQGVIFEKEIDSVVLLGESLEDFASGNQLFVVDRQFKPELEWSEAEKLSLKAQFEED
ETLWLLTSRRPSKTLISLVSRGRILQIDVIDRWGNKGIKTEKPLARWQL
>Mature_289_residues
MNTKKLIIGLGLIATSAYTPLTVAKDILTSTPVTYMLSQQLMQGTGIETSYLPPKRYGIERLVNWFGSKGQQQVIKAGQD
ATVAISLGAIWHQDPTFVYARQGNVRLIEIDASQAISPRAQGVAALKLENGETSKFAWMNPTNLIRMAAIVGEDLQKVYP
QYQTQIEKNQQALMLDVRELINQQQGVIFEKEIDSVVLLGESLEDFASGNQLFVVDRQFKPELEWSEAEKLSLKAQFEED
ETLWLLTSRRPSKTLISLVSRGRILQIDVIDRWGNKGIKTEKPLARWQL

Specific function: Unknown

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32521; Mature: 32521

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKKLIIGLGLIATSAYTPLTVAKDILTSTPVTYMLSQQLMQGTGIETSYLPPKRYGIE
CCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLVNWFGSKGQQQVIKAGQDATVAISLGAIWHQDPTFVYARQGNVRLIEIDASQAISPRA
HHHHHHCCCCHHHHHHCCCCCEEEEEECEEEECCCCEEEEECCCEEEEEECCCCCCCCHH
QGVAALKLENGETSKFAWMNPTNLIRMAAIVGEDLQKVYPQYQTQIEKNQQALMLDVREL
CCEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
INQQQGVIFEKEIDSVVLLGESLEDFASGNQLFVVDRQFKPELEWSEAEKLSLKAQFEED
HCHHCCEEEECCCCEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
ETLWLLTSRRPSKTLISLVSRGRILQIDVIDRWGNKGIKTEKPLARWQL
CEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNTKKLIIGLGLIATSAYTPLTVAKDILTSTPVTYMLSQQLMQGTGIETSYLPPKRYGIE
CCCCEEEEEEHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLVNWFGSKGQQQVIKAGQDATVAISLGAIWHQDPTFVYARQGNVRLIEIDASQAISPRA
HHHHHHCCCCHHHHHHCCCCCEEEEEECEEEECCCCEEEEECCCEEEEEECCCCCCCCHH
QGVAALKLENGETSKFAWMNPTNLIRMAAIVGEDLQKVYPQYQTQIEKNQQALMLDVREL
CCEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
INQQQGVIFEKEIDSVVLLGESLEDFASGNQLFVVDRQFKPELEWSEAEKLSLKAQFEED
HCHHCCEEEECCCCEEEEECCCHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
ETLWLLTSRRPSKTLISLVSRGRILQIDVIDRWGNKGIKTEKPLARWQL
CEEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA