| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977940
Identifier: 156977940
GI number: 156977940
Start: 1867460
End: 1868209
Strand: Reverse
Name: 156977940
Synonym: VIBHAR_06736
Alternate gene names: NA
Gene position: 1868209-1867460 (Counterclockwise)
Preceding gene: 156977945
Following gene: 156977937
Centisome position: 84.76
GC content: 46.53
Gene sequence:
>750_bases ATGTATCTTGCCGAGTACCCAGACAAATTAATGCTGCTTGATGGCGCCAGTCGAGCGGATATCCCTCATCTTAAAGATTT TATCGAGCATCAGCTCAATCGACCGTTCACTGACCTAAAACTGGTCGTCGTTACCCACATGCACCCAGACCACGCTGGTG CAGCGCACAAGTTACGAGATCTCACTGGTTGTCAGCTTCTGGCAGCAAAGCGAGAAACGCACTGGTATGGTGGTTTAGAT GGTTGGTTGATGCATCTTACGGATTTGATTTTGGCGCGTTGGATGGCGAACCGAATGCGCAAACCTAAGTGTAACCTTTG GTATTCGCGAAAACTAAGACCGGATATCGAGCTGGTGGATGGAGAAGTGATTCCCGGTTTTACTGATTGGCAGATATTGG AAACACCGGGGCATACTGATAGAGATTTATCGGTTTATCATGCTGAGCAAGATGTGCTTTATGTCGCGGACTTAATGGTA CAGGTAAAAAGCCATTTGATTGCGCCGTTTCCTATCTTTCATCCCAATCAGTATCGCAGTTCGTTAAAGCGCGTTTTTGA GATGAATCCGAGTTGTTTGTTGGCGGCTCATGGCGGTGAAGTTGAGTTTGATGACGATGCGTATCAACACATCATCAATA CCGCACCGGTTAGACCCATTACGCACTGGCGAGTGACGAAGATAAAACTGAAAGGATTAATGCGATCTGTACTGAGAAGA AAGAACGATAAACAGGAGAAGGGCAGTTAG
Upstream 100 bases:
>100_bases CTGACTAGTAAGGATTTGGTCGATAAGAAATAAGAACAAAGACTCAACAAAACAAGGACATGTTTTGCAGCTGCACAGAA TTCAGGGATACATCCAAACC
Downstream 100 bases:
>100_bases AATTGTATTTAAGAGCCAGATGAGCGACCACGGAGTTCGCTCATCTGAAGCTACGGGGATTATGGAGCCAATAAGTGAGA TTGGCTCGGGTCTACCAGAA
Product: zinc metallohydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Zinc Metallohydrolase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MYLAEYPDKLMLLDGASRADIPHLKDFIEHQLNRPFTDLKLVVVTHMHPDHAGAAHKLRDLTGCQLLAAKRETHWYGGLD GWLMHLTDLILARWMANRMRKPKCNLWYSRKLRPDIELVDGEVIPGFTDWQILETPGHTDRDLSVYHAEQDVLYVADLMV QVKSHLIAPFPIFHPNQYRSSLKRVFEMNPSCLLAAHGGEVEFDDDAYQHIINTAPVRPITHWRVTKIKLKGLMRSVLRR KNDKQEKGS
Sequences:
>Translated_249_residues MYLAEYPDKLMLLDGASRADIPHLKDFIEHQLNRPFTDLKLVVVTHMHPDHAGAAHKLRDLTGCQLLAAKRETHWYGGLD GWLMHLTDLILARWMANRMRKPKCNLWYSRKLRPDIELVDGEVIPGFTDWQILETPGHTDRDLSVYHAEQDVLYVADLMV QVKSHLIAPFPIFHPNQYRSSLKRVFEMNPSCLLAAHGGEVEFDDDAYQHIINTAPVRPITHWRVTKIKLKGLMRSVLRR KNDKQEKGS >Mature_249_residues MYLAEYPDKLMLLDGASRADIPHLKDFIEHQLNRPFTDLKLVVVTHMHPDHAGAAHKLRDLTGCQLLAAKRETHWYGGLD GWLMHLTDLILARWMANRMRKPKCNLWYSRKLRPDIELVDGEVIPGFTDWQILETPGHTDRDLSVYHAEQDVLYVADLMV QVKSHLIAPFPIFHPNQYRSSLKRVFEMNPSCLLAAHGGEVEFDDDAYQHIINTAPVRPITHWRVTKIKLKGLMRSVLRR KNDKQEKGS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28829; Mature: 28829
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLAEYPDKLMLLDGASRADIPHLKDFIEHQLNRPFTDLKLVVVTHMHPDHAGAAHKLRD CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHH LTGCQLLAAKRETHWYGGLDGWLMHLTDLILARWMANRMRKPKCNLWYSRKLRPDIELVD HCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEC GEVIPGFTDWQILETPGHTDRDLSVYHAEQDVLYVADLMVQVKSHLIAPFPIFHPNQYRS CEECCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SLKRVFEMNPSCLLAAHGGEVEFDDDAYQHIINTAPVRPITHWRVTKIKLKGLMRSVLRR HHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KNDKQEKGS CCCCCCCCC >Mature Secondary Structure MYLAEYPDKLMLLDGASRADIPHLKDFIEHQLNRPFTDLKLVVVTHMHPDHAGAAHKLRD CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHH LTGCQLLAAKRETHWYGGLDGWLMHLTDLILARWMANRMRKPKCNLWYSRKLRPDIELVD HCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEC GEVIPGFTDWQILETPGHTDRDLSVYHAEQDVLYVADLMVQVKSHLIAPFPIFHPNQYRS CEECCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SLKRVFEMNPSCLLAAHGGEVEFDDDAYQHIINTAPVRPITHWRVTKIKLKGLMRSVLRR HHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH KNDKQEKGS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA