| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977930
Identifier: 156977930
GI number: 156977930
Start: 1859644
End: 1861680
Strand: Reverse
Name: 156977930
Synonym: VIBHAR_06725
Alternate gene names: NA
Gene position: 1861680-1859644 (Counterclockwise)
Preceding gene: 156977932
Following gene: 156977927
Centisome position: 84.47
GC content: 50.17
Gene sequence:
>2037_bases ATGAGTAAGGAAACCTTCGACGCGACGCGTTACAACCAGAGTAATAACAAGCCTTTTGAAGAAGTACTGGAAGCGAGCCT ATCTCGACGCAGTATCCTAAAAGGTGGCCTAGGTATCAGTGCGATGACCGCTTTTGGTGCGTTTGGCTTATCTGGGTGCA ACGATTCTAGCTCTGGCACTTCAGCTGGCAATGGGTCTAACGTGTCTAGCGCAGTATTGAATTTTGATTCTATTCCGGGC TCTCTGACGGATGCAGTTTCGATTCCGCAAGGTTATGTCGCACAAGTTTTGGTACCTTGGGGCACACCTCTAAATGCACA AGGTAATGCTTGGAAAGACGATGGCAGCAATACGAGTGCTGATCAGCTCAATGCGCTTGGTATGCATCATGACGGCATGC ATTTCTTCTCACTAAATGACAGTGATACTGATGGCTTGTTGTGTATTAACCACGAGTACATTGATACTTCAGCATTGCAT CCTAGCGGTCCAACCGTTGTGGGCGGCGTGCGTACTATTGTCGACGAAGTTCGTAAAGAAATTAACGCGCACGGTGTATC CGTGGTTCGCGTTCAACTTGAAGACAACATGTGGAAGCTGGTGGATACCGACCCACTAAACCGCCGTTACACTGGCGCGA CAGTTATGGACTTATCTGGTCCTGTGGCAAATACAGAATTGGCCGTGACTCGCTTCTCTCAAGATGGCAGCCAAGCACGT GGCACACTAAACAACTGTGGTAATGGTTTCTCGCCTTGGGGCACATACCTAACGTGTGAAGAGAACTGGCCGGGTTACTT TGTCAACGCAGGTGTTCGCACTGAAGAGCAAGATCGTATTGGTGTAGATGACGAACGCACTCGCTACTTATGGGAAACGT TGGCGGGCAACGCTGAAGAACGCTTGGACGAGTTTACGCGCTTCAATGTTGAGCCTACGGGCGCAAGTGCATTGGATGAT TACCGTAATGAAGCGAACGGCCATGGTTACATCGTTGAGATCGACCCTTACACGCAAAACTCACGTGCTAAGAAGCGTAC TGCACTAGGTCGCTTTCGTCACGAGGGCTGTACATTCGGCAAGCTTGAAGAAGGCAAACCTGTGGTCTTTTACTCAGGCC ACGACTCTCGCTTTGAGTACCTATACAAATTTGAATCTGCAGCAGCGTGGGACCCAGCAGATGCTAATCCAGCAAACCGT TTGGCGACGGGCGATAAGTATATGGATGAAGGCACACTGTATGTGGCGCGCTTCAACGAAGACAGCTCTGGTACTTGGTT GCCACTGACACTAGATAGCACGACAGTTTCTGGTGGCACTTTGGCAGATAGCTTCAATTCGTTGGCAGAAATCATCCTCA ATACGGCTGGCGCAGCCGACCTTGTTGGTGCGACGCCAATGGATCGCCCTGAGTGGTGTACCGTTGACCCATTCACAGGC TCGGTTTACCTGACGCTAACGAACAACACCAAGCGCACAGAGGAAACTAACCCTGCAAACCCACGTTTAAACAACAAGTT TGGTCACGTAATCCGTTGGGATGAAGGCGAAGCAGCAACAGACTTCACGTGGGATATCTTCGTGTTTGGTTCTCCAGCAA ACGGCGATGCGGACACTAACCGTTCGAGTTTGACCGAGCTCAACCAGTTTGCGAGCCCAGACGGTTTGGCGTTTGATCCT CGTGGCATTCTGTGGATTCAAACGGATAACGGTGCAGATGAAGTGACGTCTTACACTAATGACCAAATGCTTGCGGTTGT ACCTTCAAAGCTGACGGATGAAAACGGCACGCAAGAAGTGATCGGCACAGAAAACCAAGCTGAGCTGAAGCGTTTCTTTG TTGGTCCTAACGGCTGTGAAGTGACAGGATTTACCATCAGCCCAGATTACAAGTCTTTGTTCGTGAACATTCAGCACCCA GGTAACTGGCCTTATAGCGACAATGCTGCGGAAGAGACACCAGCGGGGATGACACTGCGCCCACGTGCAGCAACGGTGGT TATTCGTCGTGAAGACGGTGGTGAAATTGGTGTGTAG
Upstream 100 bases:
>100_bases CATAAAGATGGACTACTTCTGTCACTTTTCTCTTCCAAACTTCCTCTCGCTTGATAATTAACAAACTTATAATTCAACCT AACACTGGGAAAGCAACACC
Downstream 100 bases:
>100_bases CCACTAGGTTGTACGACTGAATATCGGGAATAAGAAAAGCCCTGCGTTTGCAGGGCTTTGTTGTTTCTGATGAGTTGCTT ACTAAAACTAGCTTTTGAGA
Product: dTDP-D-glucose 4,6-dehydratase
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MSKETFDATRYNQSNNKPFEEVLEASLSRRSILKGGLGISAMTAFGAFGLSGCNDSSSGTSAGNGSNVSSAVLNFDSIPG SLTDAVSIPQGYVAQVLVPWGTPLNAQGNAWKDDGSNTSADQLNALGMHHDGMHFFSLNDSDTDGLLCINHEYIDTSALH PSGPTVVGGVRTIVDEVRKEINAHGVSVVRVQLEDNMWKLVDTDPLNRRYTGATVMDLSGPVANTELAVTRFSQDGSQAR GTLNNCGNGFSPWGTYLTCEENWPGYFVNAGVRTEEQDRIGVDDERTRYLWETLAGNAEERLDEFTRFNVEPTGASALDD YRNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCTFGKLEEGKPVVFYSGHDSRFEYLYKFESAAAWDPADANPANR LATGDKYMDEGTLYVARFNEDSSGTWLPLTLDSTTVSGGTLADSFNSLAEIILNTAGAADLVGATPMDRPEWCTVDPFTG SVYLTLTNNTKRTEETNPANPRLNNKFGHVIRWDEGEAATDFTWDIFVFGSPANGDADTNRSSLTELNQFASPDGLAFDP RGILWIQTDNGADEVTSYTNDQMLAVVPSKLTDENGTQEVIGTENQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHP GNWPYSDNAAEETPAGMTLRPRAATVVIRREDGGEIGV
Sequences:
>Translated_678_residues MSKETFDATRYNQSNNKPFEEVLEASLSRRSILKGGLGISAMTAFGAFGLSGCNDSSSGTSAGNGSNVSSAVLNFDSIPG SLTDAVSIPQGYVAQVLVPWGTPLNAQGNAWKDDGSNTSADQLNALGMHHDGMHFFSLNDSDTDGLLCINHEYIDTSALH PSGPTVVGGVRTIVDEVRKEINAHGVSVVRVQLEDNMWKLVDTDPLNRRYTGATVMDLSGPVANTELAVTRFSQDGSQAR GTLNNCGNGFSPWGTYLTCEENWPGYFVNAGVRTEEQDRIGVDDERTRYLWETLAGNAEERLDEFTRFNVEPTGASALDD YRNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCTFGKLEEGKPVVFYSGHDSRFEYLYKFESAAAWDPADANPANR LATGDKYMDEGTLYVARFNEDSSGTWLPLTLDSTTVSGGTLADSFNSLAEIILNTAGAADLVGATPMDRPEWCTVDPFTG SVYLTLTNNTKRTEETNPANPRLNNKFGHVIRWDEGEAATDFTWDIFVFGSPANGDADTNRSSLTELNQFASPDGLAFDP RGILWIQTDNGADEVTSYTNDQMLAVVPSKLTDENGTQEVIGTENQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHP GNWPYSDNAAEETPAGMTLRPRAATVVIRREDGGEIGV >Mature_677_residues SKETFDATRYNQSNNKPFEEVLEASLSRRSILKGGLGISAMTAFGAFGLSGCNDSSSGTSAGNGSNVSSAVLNFDSIPGS LTDAVSIPQGYVAQVLVPWGTPLNAQGNAWKDDGSNTSADQLNALGMHHDGMHFFSLNDSDTDGLLCINHEYIDTSALHP SGPTVVGGVRTIVDEVRKEINAHGVSVVRVQLEDNMWKLVDTDPLNRRYTGATVMDLSGPVANTELAVTRFSQDGSQARG TLNNCGNGFSPWGTYLTCEENWPGYFVNAGVRTEEQDRIGVDDERTRYLWETLAGNAEERLDEFTRFNVEPTGASALDDY RNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCTFGKLEEGKPVVFYSGHDSRFEYLYKFESAAAWDPADANPANRL ATGDKYMDEGTLYVARFNEDSSGTWLPLTLDSTTVSGGTLADSFNSLAEIILNTAGAADLVGATPMDRPEWCTVDPFTGS VYLTLTNNTKRTEETNPANPRLNNKFGHVIRWDEGEAATDFTWDIFVFGSPANGDADTNRSSLTELNQFASPDGLAFDPR GILWIQTDNGADEVTSYTNDQMLAVVPSKLTDENGTQEVIGTENQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHPG NWPYSDNAAEETPAGMTLRPRAATVVIRREDGGEIGV
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73785; Mature: 73654
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKETFDATRYNQSNNKPFEEVLEASLSRRSILKGGLGISAMTAFGAFGLSGCNDSSSGT CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC SAGNGSNVSSAVLNFDSIPGSLTDAVSIPQGYVAQVLVPWGTPLNAQGNAWKDDGSNTSA CCCCCCCCHHHEEECCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCH DQLNALGMHHDGMHFFSLNDSDTDGLLCINHEYIDTSALHPSGPTVVGGVRTIVDEVRKE HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH INAHGVSVVRVQLEDNMWKLVDTDPLNRRYTGATVMDLSGPVANTELAVTRFSQDGSQAR HCCCCEEEEEEEECCCEEEEECCCCCCCEECCEEEEECCCCCCCCEEEEEEECCCCCHHC GTLNNCGNGFSPWGTYLTCEENWPGYFVNAGVRTEEQDRIGVDDERTRYLWETLAGNAEE CCHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH RLDEFTRFNVEPTGASALDDYRNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCTFG HHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC KLEEGKPVVFYSGHDSRFEYLYKFESAAAWDPADANPANRLATGDKYMDEGTLYVARFNE CCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECC DSSGTWLPLTLDSTTVSGGTLADSFNSLAEIILNTAGAADLVGATPMDRPEWCTVDPFTG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCC SVYLTLTNNTKRTEETNPANPRLNNKFGHVIRWDEGEAATDFTWDIFVFGSPANGDADTN EEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCC RSSLTELNQFASPDGLAFDPRGILWIQTDNGADEVTSYTNDQMLAVVPSKLTDENGTQEV HHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHHHCCCCEEEEEECCHHCCCCCCHHH IGTENQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHPGNWPYSDNAAEETPAGMTLR CCCCCHHHHHHEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEC PRAATVVIRREDGGEIGV CCEEEEEEEECCCCCCCC >Mature Secondary Structure SKETFDATRYNQSNNKPFEEVLEASLSRRSILKGGLGISAMTAFGAFGLSGCNDSSSGT CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC SAGNGSNVSSAVLNFDSIPGSLTDAVSIPQGYVAQVLVPWGTPLNAQGNAWKDDGSNTSA CCCCCCCCHHHEEECCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCH DQLNALGMHHDGMHFFSLNDSDTDGLLCINHEYIDTSALHPSGPTVVGGVRTIVDEVRKE HHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH INAHGVSVVRVQLEDNMWKLVDTDPLNRRYTGATVMDLSGPVANTELAVTRFSQDGSQAR HCCCCEEEEEEEECCCEEEEECCCCCCCEECCEEEEECCCCCCCCEEEEEEECCCCCHHC GTLNNCGNGFSPWGTYLTCEENWPGYFVNAGVRTEEQDRIGVDDERTRYLWETLAGNAEE CCHHHCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH RLDEFTRFNVEPTGASALDDYRNEANGHGYIVEIDPYTQNSRAKKRTALGRFRHEGCTFG HHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC KLEEGKPVVFYSGHDSRFEYLYKFESAAAWDPADANPANRLATGDKYMDEGTLYVARFNE CCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEECC DSSGTWLPLTLDSTTVSGGTLADSFNSLAEIILNTAGAADLVGATPMDRPEWCTVDPFTG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCC SVYLTLTNNTKRTEETNPANPRLNNKFGHVIRWDEGEAATDFTWDIFVFGSPANGDADTN EEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCC RSSLTELNQFASPDGLAFDPRGILWIQTDNGADEVTSYTNDQMLAVVPSKLTDENGTQEV HHHHHHHHHHCCCCCCEECCCCEEEEEECCCHHHHHHCCCCEEEEEECCHHCCCCCCHHH IGTENQAELKRFFVGPNGCEVTGFTISPDYKSLFVNIQHPGNWPYSDNAAEETPAGMTLR CCCCCHHHHHHEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEC PRAATVVIRREDGGEIGV CCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA