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The map label for this gene is uidR [C]

Identifier: 156977880

GI number: 156977880

Start: 1811328

End: 1811924

Strand: Reverse

Name: uidR [C]

Synonym: VIBHAR_06672

Alternate gene names: 156977880

Gene position: 1811924-1811328 (Counterclockwise)

Preceding gene: 156977886

Following gene: 156977878

Centisome position: 82.21

GC content: 45.56

Gene sequence:

>597_bases
ATGAAGCTTTCAGAAAAAAAACGCATAGCGCTGATTGAAGCGGCTCAGCAGGAGTTTATTGAGCATGGCTTTAGCGGCGC
CAATATGGACAGGGTATGTGAAAGAGCTGGGACATCAAAGCGCACCTTATATCGTCATTTTGAAAGCAAAGATGTACTGT
TTATTGAGTCGATTCAAAGTGTGCTCGAAGCTCAGCGTGCGCGCTTGCAACTCAAGTATGCATCAGACGTTAACGTCGAA
ACTCAGCTTAGAACCTATTTGCAAGCCAAATTAGATTCGATGTATGAAGATTTTGGCCTACCACTGGCTAAAATGGTGAT
CAGTGAGTTTATGCGTACCCCAGAACTGGCAGAGAACTATTTGCATCAACTTCAACGCCAAGACGAATTGCTGGAGAATT
GGTTTGCAGAGGCTATTGCAGATACCAAGGTTAAAGCGCTCGACCCTGCAATGATGAGCGGCATGCTGATGTGCTTGTTA
AAAGGAAACTGCTTGTGGCCTCAGTTGGTTGCTAATCAAGCGGTGCCAAGCGTCGAGCAGCGTAAGAAAATCGTCGAAGA
TATCCTTACGCTGTTTCTAGATGGCTACCGTTACTAG

Upstream 100 bases:

>100_bases
TGTTACTCCTAAATTCAAAAAAGTAAACTTCAAAGTGTACTTTTGATTCTTGTGCGCTATACTCCGCATCCACTTACATG
AGGTTGGTGAATCAAGAACG

Downstream 100 bases:

>100_bases
CTTGTCATCACTCTCATCTAATTAATAGATAAGTGGCGTAAGGTAGAAAGCTGGGTGTGATTCCATATCCAGCGGTTTTG
TGCGTGGTTGTGGATCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Calsymin Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKLSEKKRIALIEAAQQEFIEHGFSGANMDRVCERAGTSKRTLYRHFESKDVLFIESIQSVLEAQRARLQLKYASDVNVE
TQLRTYLQAKLDSMYEDFGLPLAKMVISEFMRTPELAENYLHQLQRQDELLENWFAEAIADTKVKALDPAMMSGMLMCLL
KGNCLWPQLVANQAVPSVEQRKKIVEDILTLFLDGYRY

Sequences:

>Translated_198_residues
MKLSEKKRIALIEAAQQEFIEHGFSGANMDRVCERAGTSKRTLYRHFESKDVLFIESIQSVLEAQRARLQLKYASDVNVE
TQLRTYLQAKLDSMYEDFGLPLAKMVISEFMRTPELAENYLHQLQRQDELLENWFAEAIADTKVKALDPAMMSGMLMCLL
KGNCLWPQLVANQAVPSVEQRKKIVEDILTLFLDGYRY
>Mature_198_residues
MKLSEKKRIALIEAAQQEFIEHGFSGANMDRVCERAGTSKRTLYRHFESKDVLFIESIQSVLEAQRARLQLKYASDVNVE
TQLRTYLQAKLDSMYEDFGLPLAKMVISEFMRTPELAENYLHQLQRQDELLENWFAEAIADTKVKALDPAMMSGMLMCLL
KGNCLWPQLVANQAVPSVEQRKKIVEDILTLFLDGYRY

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22859; Mature: 22859

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSEKKRIALIEAAQQEFIEHGFSGANMDRVCERAGTSKRTLYRHFESKDVLFIESIQS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH
VLEAQRARLQLKYASDVNVETQLRTYLQAKLDSMYEDFGLPLAKMVISEFMRTPELAENY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LHQLQRQDELLENWFAEAIADTKVKALDPAMMSGMLMCLLKGNCLWPQLVANQAVPSVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
RKKIVEDILTLFLDGYRY
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLSEKKRIALIEAAQQEFIEHGFSGANMDRVCERAGTSKRTLYRHFESKDVLFIESIQS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH
VLEAQRARLQLKYASDVNVETQLRTYLQAKLDSMYEDFGLPLAKMVISEFMRTPELAENY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LHQLQRQDELLENWFAEAIADTKVKALDPAMMSGMLMCLLKGNCLWPQLVANQAVPSVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHH
RKKIVEDILTLFLDGYRY
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA