| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977878
Identifier: 156977878
GI number: 156977878
Start: 1806210
End: 1806425
Strand: Reverse
Name: 156977878
Synonym: VIBHAR_06670
Alternate gene names: NA
Gene position: 1806425-1806210 (Counterclockwise)
Preceding gene: 156977880
Following gene: 156977871
Centisome position: 81.96
GC content: 44.91
Gene sequence:
>216_bases ATGTTTAGAATCATCAAACATGTATCCTCGAGCAGTACTGTTATCGCAGTAGCAAAATGCTTTCAGTGTATCGTGGGTAT AACCCAAATGGTTTGTCAGAACCCCCAATGCAAACTCACCGTGGGGAGCGTGCTCACTGTCCCAATATGGTATGGTGTAA CCGCCAAGATAAAAAGCCAATCGAGGGAAGGTGAGCCCTACAATCAAAAGTGGTAA
Upstream 100 bases:
>100_bases TCATTAAAGATCGAAATACTTCGAACTCGCGTGGCTTTTCGCGGAAGATTTTAAGTAATCCAGTGACTTGGCTATGATTC GTTAGGTCGCTTGCACTCCC
Downstream 100 bases:
>100_bases CTACCCAAATACTTGTTCTTCAGATACCCACATCTCACTAGAGTCATTAAATTGTCTCGCGAGGTGGCAAATCAATTTAG CCATTTCCTCTAATTCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MFRIIKHVSSSSTVIAVAKCFQCIVGITQMVCQNPQCKLTVGSVLTVPIWYGVTAKIKSQSREGEPYNQKW
Sequences:
>Translated_71_residues MFRIIKHVSSSSTVIAVAKCFQCIVGITQMVCQNPQCKLTVGSVLTVPIWYGVTAKIKSQSREGEPYNQKW >Mature_71_residues MFRIIKHVSSSSTVIAVAKCFQCIVGITQMVCQNPQCKLTVGSVLTVPIWYGVTAKIKSQSREGEPYNQKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7918; Mature: 7918
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIIKHVSSSSTVIAVAKCFQCIVGITQMVCQNPQCKLTVGSVLTVPIWYGVTAKIKSQ CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHCCCEEEECCC SREGEPYNQKW CCCCCCCCCCC >Mature Secondary Structure MFRIIKHVSSSSTVIAVAKCFQCIVGITQMVCQNPQCKLTVGSVLTVPIWYGVTAKIKSQ CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHCCCEEEECCC SREGEPYNQKW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA