| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977859
Identifier: 156977859
GI number: 156977859
Start: 1789004
End: 1789222
Strand: Reverse
Name: 156977859
Synonym: VIBHAR_06650
Alternate gene names: NA
Gene position: 1789222-1789004 (Counterclockwise)
Preceding gene: 156977861
Following gene: 156977857
Centisome position: 81.18
GC content: 44.75
Gene sequence:
>219_bases ATGAGCCAACAGCAGCCGAATAACCCACTTCACGGGTTGAGTTTAGAAAAAATCCTTACCCGTTTAGTTGAGCACTTTGG GTGGAAGGGAATGCATGAGCGCGTTCGTGTTAATTGTTTTCAGAAAGATCCTTCGATTAAATCGTCGTTGAAGTTCCTGC GTAAAACGCAATGGGCGAGAGATAAGGTTGAAGCGCTGTACATCGAGACGTTCTGTTAA
Upstream 100 bases:
>100_bases TATAGGGGAGAGTCGCAGGGCAATTCAAGGCTAAAACATTAGGTTGCACGGCGAGTTTGAGTTAGATTAGCGCGCAACTT CACTTTACTGGATCAATAGC
Downstream 100 bases:
>100_bases TTGGATTTGGTTAACGTCTCAAAGAGAGATTCCGGATGGCTCGCTCGGGCTCGTCCGGAATGACGTCTGAGCTCGTATTG TAGGGGCTAACACCCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC
Sequences:
>Translated_72_residues MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC >Mature_71_residues SQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8544; Mature: 8413
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWAR CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH DKVEALYIETFC HHHHHHHHHHCC >Mature Secondary Structure SQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWAR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH DKVEALYIETFC HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA