Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977859

Identifier: 156977859

GI number: 156977859

Start: 1789004

End: 1789222

Strand: Reverse

Name: 156977859

Synonym: VIBHAR_06650

Alternate gene names: NA

Gene position: 1789222-1789004 (Counterclockwise)

Preceding gene: 156977861

Following gene: 156977857

Centisome position: 81.18

GC content: 44.75

Gene sequence:

>219_bases
ATGAGCCAACAGCAGCCGAATAACCCACTTCACGGGTTGAGTTTAGAAAAAATCCTTACCCGTTTAGTTGAGCACTTTGG
GTGGAAGGGAATGCATGAGCGCGTTCGTGTTAATTGTTTTCAGAAAGATCCTTCGATTAAATCGTCGTTGAAGTTCCTGC
GTAAAACGCAATGGGCGAGAGATAAGGTTGAAGCGCTGTACATCGAGACGTTCTGTTAA

Upstream 100 bases:

>100_bases
TATAGGGGAGAGTCGCAGGGCAATTCAAGGCTAAAACATTAGGTTGCACGGCGAGTTTGAGTTAGATTAGCGCGCAACTT
CACTTTACTGGATCAATAGC

Downstream 100 bases:

>100_bases
TTGGATTTGGTTAACGTCTCAAAGAGAGATTCCGGATGGCTCGCTCGGGCTCGTCCGGAATGACGTCTGAGCTCGTATTG
TAGGGGCTAACACCCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC

Sequences:

>Translated_72_residues
MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC
>Mature_71_residues
SQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWARDKVEALYIETFC

Specific function: Unknown

COG id: COG4628

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8544; Mature: 8413

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWAR
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DKVEALYIETFC
HHHHHHHHHHCC
>Mature Secondary Structure 
SQQQPNNPLHGLSLEKILTRLVEHFGWKGMHERVRVNCFQKDPSIKSSLKFLRKTQWAR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DKVEALYIETFC
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA