Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977861

Identifier: 156977861

GI number: 156977861

Start: 1790282

End: 1790572

Strand: Reverse

Name: 156977861

Synonym: VIBHAR_06652

Alternate gene names: NA

Gene position: 1790572-1790282 (Counterclockwise)

Preceding gene: 156977862

Following gene: 156977859

Centisome position: 81.24

GC content: 41.92

Gene sequence:

>291_bases
ATGATCCATCTAGTCGCAGAAATTAAAGCTTTTCCTGACCATATTGAACAGGTGACTCAGTTACTTACTGAACTACTCGC
TCCCACTCGTGAAGAAGAGGGATGTTGCCAATACGAGCTGTATTTGGATGAAAAAATCGAAGGCCTGTTTATGTTCCAAG
AAATGTGGGCATCGCAAGAAGCTTTAGACAAGCACTTACAAAGCCCTCACATTACCCAATGTTTTTCTACATTAGAAAAG
AACGGCCTACTTGAGTACACCCATATCCGACCGATGACGTTTGTTGGTTAA

Upstream 100 bases:

>100_bases
CAAATTTATTTTGAAAAAGTTATTCGCTTAGGTCGATTTTTCTCTTGGGTGGAAAGGAGTAGATTGTTGGAATATAGAAA
AACACTCAAAGAGATAAAAA

Downstream 100 bases:

>100_bases
CGCTCTGAACAGAATGTTGTCAGTACAGACTTCCTTTGCTGGCAACATTTCTCTTGGATAAAATCTCGGAAAGTACGAAT
CGTTGGTGTTAGCAATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MIHLVAEIKAFPDHIEQVTQLLTELLAPTREEEGCCQYELYLDEKIEGLFMFQEMWASQEALDKHLQSPHITQCFSTLEK
NGLLEYTHIRPMTFVG

Sequences:

>Translated_96_residues
MIHLVAEIKAFPDHIEQVTQLLTELLAPTREEEGCCQYELYLDEKIEGLFMFQEMWASQEALDKHLQSPHITQCFSTLEK
NGLLEYTHIRPMTFVG
>Mature_96_residues
MIHLVAEIKAFPDHIEQVTQLLTELLAPTREEEGCCQYELYLDEKIEGLFMFQEMWASQEALDKHLQSPHITQCFSTLEK
NGLLEYTHIRPMTFVG

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11198; Mature: 11198

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLVAEIKAFPDHIEQVTQLLTELLAPTREEEGCCQYELYLDEKIEGLFMFQEMWASQE
CCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHH
ALDKHLQSPHITQCFSTLEKNGLLEYTHIRPMTFVG
HHHHHCCCCCHHHHHHHHHHCCCEEECCCCCEECCC
>Mature Secondary Structure
MIHLVAEIKAFPDHIEQVTQLLTELLAPTREEEGCCQYELYLDEKIEGLFMFQEMWASQE
CCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHH
ALDKHLQSPHITQCFSTLEKNGLLEYTHIRPMTFVG
HHHHHCCCCCHHHHHHHHHHCCCEEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA