Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977855

Identifier: 156977855

GI number: 156977855

Start: 1785739

End: 1786575

Strand: Reverse

Name: 156977855

Synonym: VIBHAR_06646

Alternate gene names: NA

Gene position: 1786575-1785739 (Counterclockwise)

Preceding gene: 156977856

Following gene: 156977853

Centisome position: 81.06

GC content: 47.67

Gene sequence:

>837_bases
ATGATGAAAAAAGCAGGTTGGGCAGTGTGCCTTGCGGCGCTCACTTCTTTTGCTACGATGGCTGGCGAATGGGAGGTGGA
AATGGGTGGCTTTTTCTCTCGCACTGATACAAAACTCAACGCTTACGACCCTTACCTCGACAAAATTCGCACCATTGATT
TCGAATCTGATCTCGATTTGAAAGAGTTCACCGTGCTGCCTTATGTCGAAGTAGAGTATTACTTCAACAAAAAGCACAGC
GTGTACGTAGATTGGCGTAGTTTGCACCGGGAGGCAACTCGCACGGCGGTGACTAAGCCTTTTGAGGTCACTATAAATGG
AACAACTTATGCGGTTCAGGCTGGTTCAAAACTGACCACAGAGCTGAATATCGATATCGCTCGCCTAGGCTATGGTTACC
AGTTTTATACTAGCGATAAATGGGCCGTGGACGTGTTGGCAGGCTTGCACGTGATGTGGTTGTCGTTAGGCTTGGACGGC
AAGCTTGGCGCAAAGGTGAGTGGCGTTGATGAGATCCCAGTGATGTTCGTCGATGACGCGGTGTTGAGCGATGTTACGGC
GCCTTTGCCTGATTTAGGAATCCGAGCCGAATACTCACTGAATGAAGATTGGATCTTGAAAAGTCATGCGCAGATTTTCT
ATCTCGCAGTGGATGATATCGAGGGCTATTTATTAGAGCTCGATGTCGGTGCGAAATACTTCTTTACCGATCAGTTCAGT
ATGACGGGGTCATTCAACTATTACGAAGTCGGCGTGGACTATGAAAGTGATAAGTCCGCGCTCGATGTTACCTACCGATT
CTATGGTCCAATGCTGACCTTGGCATTAAAATACTGA

Upstream 100 bases:

>100_bases
CTTTGTTTCATTCAGAGTTGCGATCGAGTCAACTTTTCATATCTCCCTTCCTACAACTACACTTACTTCAGACATAAATT
CAATCGCTTAGGGTTCAAGG

Downstream 100 bases:

>100_bases
ATTAAAAAGCCACACTCGAGTGTGGCTTTTTGAATTGAATCTTTCGTTAACTACACAACGGGCTTATTGCTGGTTGATGT
AGTCTTTAAAGCGCGCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MMKKAGWAVCLAALTSFATMAGEWEVEMGGFFSRTDTKLNAYDPYLDKIRTIDFESDLDLKEFTVLPYVEVEYYFNKKHS
VYVDWRSLHREATRTAVTKPFEVTINGTTYAVQAGSKLTTELNIDIARLGYGYQFYTSDKWAVDVLAGLHVMWLSLGLDG
KLGAKVSGVDEIPVMFVDDAVLSDVTAPLPDLGIRAEYSLNEDWILKSHAQIFYLAVDDIEGYLLELDVGAKYFFTDQFS
MTGSFNYYEVGVDYESDKSALDVTYRFYGPMLTLALKY

Sequences:

>Translated_278_residues
MMKKAGWAVCLAALTSFATMAGEWEVEMGGFFSRTDTKLNAYDPYLDKIRTIDFESDLDLKEFTVLPYVEVEYYFNKKHS
VYVDWRSLHREATRTAVTKPFEVTINGTTYAVQAGSKLTTELNIDIARLGYGYQFYTSDKWAVDVLAGLHVMWLSLGLDG
KLGAKVSGVDEIPVMFVDDAVLSDVTAPLPDLGIRAEYSLNEDWILKSHAQIFYLAVDDIEGYLLELDVGAKYFFTDQFS
MTGSFNYYEVGVDYESDKSALDVTYRFYGPMLTLALKY
>Mature_278_residues
MMKKAGWAVCLAALTSFATMAGEWEVEMGGFFSRTDTKLNAYDPYLDKIRTIDFESDLDLKEFTVLPYVEVEYYFNKKHS
VYVDWRSLHREATRTAVTKPFEVTINGTTYAVQAGSKLTTELNIDIARLGYGYQFYTSDKWAVDVLAGLHVMWLSLGLDG
KLGAKVSGVDEIPVMFVDDAVLSDVTAPLPDLGIRAEYSLNEDWILKSHAQIFYLAVDDIEGYLLELDVGAKYFFTDQFS
MTGSFNYYEVGVDYESDKSALDVTYRFYGPMLTLALKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31482; Mature: 31482

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKAGWAVCLAALTSFATMAGEWEVEMGGFFSRTDTKLNAYDPYLDKIRTIDFESDLDL
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCHHHHEEEECCCCCCCH
KEFTVLPYVEVEYYFNKKHSVYVDWRSLHREATRTAVTKPFEVTINGTTYAVQAGSKLTT
HHEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCEEEE
ELNIDIARLGYGYQFYTSDKWAVDVLAGLHVMWLSLGLDGKLGAKVSGVDEIPVMFVDDA
EEEEEEEEECCCEEEEECCCHHHHHHHHHHEEHHHCCCCCCCCCEECCCCCCCEEEECCH
VLSDVTAPLPDLGIRAEYSLNEDWILKSHAQIFYLAVDDIEGYLLELDVGAKYFFTDQFS
HHHHCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCEEEEEECCCEEEEEECEE
MTGSFNYYEVGVDYESDKSALDVTYRFYGPMLTLALKY
ECCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MMKKAGWAVCLAALTSFATMAGEWEVEMGGFFSRTDTKLNAYDPYLDKIRTIDFESDLDL
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCHHHHEEEECCCCCCCH
KEFTVLPYVEVEYYFNKKHSVYVDWRSLHREATRTAVTKPFEVTINGTTYAVQAGSKLTT
HHEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCEEEE
ELNIDIARLGYGYQFYTSDKWAVDVLAGLHVMWLSLGLDGKLGAKVSGVDEIPVMFVDDA
EEEEEEEEECCCEEEEECCCHHHHHHHHHHEEHHHCCCCCCCCCEECCCCCCCEEEECCH
VLSDVTAPLPDLGIRAEYSLNEDWILKSHAQIFYLAVDDIEGYLLELDVGAKYFFTDQFS
HHHHCCCCCCCCCCEEEECCCCCEEEECCCEEEEEEEECCCCEEEEEECCCEEEEEECEE
MTGSFNYYEVGVDYESDKSALDVTYRFYGPMLTLALKY
ECCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA