| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977853
Identifier: 156977853
GI number: 156977853
Start: 1783646
End: 1783768
Strand: Reverse
Name: 156977853
Synonym: VIBHAR_06644
Alternate gene names: NA
Gene position: 1783768-1783646 (Counterclockwise)
Preceding gene: 156977855
Following gene: 156977847
Centisome position: 80.93
GC content: 34.15
Gene sequence:
>123_bases ATGTCGTACGTAAACATCAGCAAGATTAAAATCAAGCCGATTCGTATAGCAGATTCCACCATGTTACTGATGAAAATCTT ACTCTCATTTTTTCCGATTGTTTATCCATTTTTGTTTACCTGA
Upstream 100 bases:
>100_bases ACGTTTCCCGCCGTACACTCTTTCCAGCTTCATACAGATTGGCATCAATGCTACCGCGATGATGGCACCCCAAATCACAG GAAGAATGAAAGCTTTGATG
Downstream 100 bases:
>100_bases TGTTCAATGTTGGAACTGACGAGACTTGAAACAACAATCGCCATATAAAACACGCCTACAATGGCCTCTAAATACACAAC GACTTGTGCCAATGGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MSYVNISKIKIKPIRIADSTMLLMKILLSFFPIVYPFLFT
Sequences:
>Translated_40_residues MSYVNISKIKIKPIRIADSTMLLMKILLSFFPIVYPFLFT >Mature_39_residues SYVNISKIKIKPIRIADSTMLLMKILLSFFPIVYPFLFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4694; Mature: 4563
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVNISKIKIKPIRIADSTMLLMKILLSFFPIVYPFLFT CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYVNISKIKIKPIRIADSTMLLMKILLSFFPIVYPFLFT CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA