| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977851
Identifier: 156977851
GI number: 156977851
Start: 1782981
End: 1783667
Strand: Direct
Name: 156977851
Synonym: VIBHAR_06642
Alternate gene names: NA
Gene position: 1782981-1783667 (Clockwise)
Preceding gene: 156977850
Following gene: 156977852
Centisome position: 80.9
GC content: 44.4
Gene sequence:
>687_bases ATGGTTATTGGAAAAAAACTCAAAAATATCAATGAAGAAAACAACTTCTTCTATCTGACCCTAGCGCTTATCGGATTATT GATCGGCGGTGCGTTTGTTCAGGTTGTTGGAGAAGGAGCAATGGAGCATCTATTGCAAGGTTTCACCATCATCACCTTTA TCGTCTGTATGGCGAGCTTGCGCTTTGACAAAAACTGGTCGCGCTTTCTCTACACCTTGCTTGGTACCTGGGTCGTAGTG ATCGTCATCAAGGCCGTACTTGGCATTAAAGAGATGGATGTGGTGATGCTTGCCCTCACCTTCGCGTTCTTCTTTGGTAC GTTCAAATCTATTGCGCGACAAATTCTTTTTACTGGGCATGTGAACACCAACAAAGTGATTGGCTCAGTTGCCCTGTTTT TGCTGTTGGGTTTGATGTGGGCAATTGCTTACCTCATCCTTCTTGAGTTCTCTCCAAACTCCTTCACAGGGATGGAAGCC ATCTCTTGGGGGCAGAACTTCTCAAATGCAGCGTATTTCAGTTTCGTCACCTTAACCACGTTAGGTTACGGCGACATCAG CCCTCTAACACCATTGGCACAAGTCGTTGTGTATTTAGAGGCCATTGTAGGCGTGTTTTATATGGCGATTGTTGTTTCAA GTCTCGTCAGTTCCAACATTGAACATCAGGTAAACAAAAATGGATAA
Upstream 100 bases:
>100_bases TTGCCAGAAGGCGTTGACCTTCGCTTTGGCCTTTCTGCTTCCATCATGGTGATGAAAGACTCATCACAAGAACAAGAGTA GGAGTTAAACGGGCATAACC
Downstream 100 bases:
>100_bases ACAATCGGAAAAAATGAGAGTAAGATTTTCATCAGTAACATGGTGGAATCTGCTATACGAATCGGCTTGATTTTAATCTT GCTGATGTTTACGTACGACA
Product: Kef-type K+ transport system NAD-binding component
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Potassium Channel; Ion Channel; Ion Channel Family Protein; Voltage-Dependent Potassium Channel; Ion Channel Protein; Ion Transport Family Protein; K+ Channel Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MVIGKKLKNINEENNFFYLTLALIGLLIGGAFVQVVGEGAMEHLLQGFTIITFIVCMASLRFDKNWSRFLYTLLGTWVVV IVIKAVLGIKEMDVVMLALTFAFFFGTFKSIARQILFTGHVNTNKVIGSVALFLLLGLMWAIAYLILLEFSPNSFTGMEA ISWGQNFSNAAYFSFVTLTTLGYGDISPLTPLAQVVVYLEAIVGVFYMAIVVSSLVSSNIEHQVNKNG
Sequences:
>Translated_228_residues MVIGKKLKNINEENNFFYLTLALIGLLIGGAFVQVVGEGAMEHLLQGFTIITFIVCMASLRFDKNWSRFLYTLLGTWVVV IVIKAVLGIKEMDVVMLALTFAFFFGTFKSIARQILFTGHVNTNKVIGSVALFLLLGLMWAIAYLILLEFSPNSFTGMEA ISWGQNFSNAAYFSFVTLTTLGYGDISPLTPLAQVVVYLEAIVGVFYMAIVVSSLVSSNIEHQVNKNG >Mature_228_residues MVIGKKLKNINEENNFFYLTLALIGLLIGGAFVQVVGEGAMEHLLQGFTIITFIVCMASLRFDKNWSRFLYTLLGTWVVV IVIKAVLGIKEMDVVMLALTFAFFFGTFKSIARQILFTGHVNTNKVIGSVALFLLLGLMWAIAYLILLEFSPNSFTGMEA ISWGQNFSNAAYFSFVTLTTLGYGDISPLTPLAQVVVYLEAIVGVFYMAIVVSSLVSSNIEHQVNKNG
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25149; Mature: 25149
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGKKLKNINEENNFFYLTLALIGLLIGGAFVQVVGEGAMEHLLQGFTIITFIVCMASL CCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFDKNWSRFLYTLLGTWVVVIVIKAVLGIKEMDVVMLALTFAFFFGTFKSIARQILFTGH HCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNTNKVIGSVALFLLLGLMWAIAYLILLEFSPNSFTGMEAISWGQNFSNAAYFSFVTLTT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH LGYGDISPLTPLAQVVVYLEAIVGVFYMAIVVSSLVSSNIEHQVNKNG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIGKKLKNINEENNFFYLTLALIGLLIGGAFVQVVGEGAMEHLLQGFTIITFIVCMASL CCCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFDKNWSRFLYTLLGTWVVVIVIKAVLGIKEMDVVMLALTFAFFFGTFKSIARQILFTGH HCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNTNKVIGSVALFLLLGLMWAIAYLILLEFSPNSFTGMEAISWGQNFSNAAYFSFVTLTT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH LGYGDISPLTPLAQVVVYLEAIVGVFYMAIVVSSLVSSNIEHQVNKNG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA