| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977814
Identifier: 156977814
GI number: 156977814
Start: 1751326
End: 1753806
Strand: Direct
Name: 156977814
Synonym: VIBHAR_06602
Alternate gene names: NA
Gene position: 1751326-1753806 (Clockwise)
Preceding gene: 156977813
Following gene: 156977817
Centisome position: 79.46
GC content: 49.9
Gene sequence:
>2481_bases ATGAACTTTACGAAAACCGCTATCGCCACCGCAGTAATTGCAAGTGTTATTGGTTTGGCTGGCTGCAACGATGACGACGA TAACACCTCACCAAGCGTCGATACTTCCAACCTAAGATACGTCGACCCATTCATTGGTACCGGCTTTAACGGACACACCT TCCCGGGTCCTATTGCGCCAGAAGGCATGGTACAACTTTCTCCAGATACCGAGCTGATCGGCTGGCACTCTTCATCAGGT TACCACTTCGATAAAAAGACCCTGTTTGGCTTCTCCCACACTCACCTATCCGGCACCGGGATGGGCGGTTTAGGTGACAT TCTGTTCCTGCCGTTTACCGAAGATAAAGCTAAATACATCGAAGACAGCGACGACTACCGCGAAGCGATTTCAGTCAAGA TGGACAAAACCTCAGAAGTGGCAGAAGCGGGTTACTACTCTGTGAAGATTGCAGAGAACGGTATCAAAGCTGAGCTTACA GCTTCTGAACGTGTCGGCTTCCATCGTTACACCTACCCCCAAGGTCAACCACAACGTCTAAAGATAGACCTCAACTCCAT CCTTAACAGTGACTGGGGTTCGACCTCTCTGCGCAACAAACTGACGGTGAGCGAAGACGGTCATACCATTACGGGCGAGC GCGATGCAGCGCACTTCTCTGGTTGGGCGAAAAACCAAAAAATCTTCTTCTATGCGACTTTCGATAAGAAGATCAAAGAC GTCTACATCCTTGCCAATGGTGAGCCTGTTGACGGCCTAACGGCAGAGCATGTTTCTGAATTGATTTACGATGACCAAGG CAATGCCATCAAACGTGTCAAAGCGGACGTTACTGCCTACATCGAATTTGAAGATGAAGGCTCACAGGAGTTGAACGCGC AAGTAGCGTTATCTGCGGTTGACCCACAAGGTGCAGAAAACAACTACGATGCCGAAGCGAATGTCTCTTTCGATACTGCG CGCAACAACGCACGTGAGAAATGGGCAAAAGCACTCAACTTCTCTATCGAAGGGGGCACCGAAGATCAGAAAGAGATCTT CTACACCGCGCTTTACCACACCAAGATTGCGCCGATGGTGCATCAAGACGTAGATGGTAGATTCCGTGGCATGGGCAAAG GCTCGATTCGTGGAGGCGAAGGGGAATACTCCATCGCTTACGGTCAAGCAACGGAAGAACAGCCAAACTTCTCGGTTTAC TCTCTATGGGATACCCAACGCGCGTTACACCCACTGAAAACCATCACAGAGCCAACTCGCGCGGTGCAATACGCGAAGAA CCTAGTTCAGAAGTACACTGAAAGCGGCTTGCTACCGAAATGGGAGCACTTAGGTGACGAAACAGGCACCATGGTGGGCT ACCCAGCGGTAGCAGTGATTGCGGATGCAATGACCAAATTCCCAGAAGAGTTTACTCAACAAGAGAAAGAGCTGGCGCTG AAAGCCGCGATCGACTCTTCGACTTACGACAACTACCCGGTACTGCAAGCAGATTGGGATCAGGGCGTATTGGATCGCAC TTTAACCAAGCACATCGATTACATTGAGAAAAACGGCTTCACGCCTGCTATCCAACGTATCGATGGTGAGCCAGTATTTG AAGACTACACGGTTGAGTCTGTTTCTTACGGTCTGGAAAACGCGTTCTACGATTGGGCCATCGCGCAAATCGCCAAAGCA GCCGGTGATACTCAAGCGGAAGAGCAATACCTTGAACGCTCAAAAGGCTACAAAAAGTACTTCGATTACAACCCGACGGA ATACGCAGAGCATGGCGTGACGGGCTTTATGCGCCCAGTGATGATTGATGAAACCTTCATGACGCCATTCGACCCATACG GCACAGAACACGAAACAGGCAACTACACCGAAGGTAACGCGTGGCAGTGGACTTGGTTTGTACCGCATGACATCGCGGGC TTAAAAACCATCATGGGTGGCGATGCTGAGTTCCAGAAAAACCTAGAAGCAACCTTCACCGCAGAAAGCCAAGGCACTGA AACACCGGATATGTCTGGTTTGATTGGTCAAGTTGCGTTTGGTAACGAGCCTTCACACCATATTCCTTACCTATTCAACT GGACCGCAGAACCATGGAAGACACAACAAGTCGTCGACCACATTCTTGATGACATGTATTTCGCTGCCCCAGAAGGCGTA GTTGGTAACGAAGACGTGGGCGCCATGTCCGCTTGGTATGTGATGTCTGCATTAGGCTTCTACCAAGTGAACGCAGCAGA ACCTATTTACACTGTGGGTCGTCCGCTATTTGACAAAGCAGTGATTCCGGTGAAAGGCGGCACGTTCACCATCACCACAG AGAACAACGCCGATGACAACATGTACATCAAGTCCGTCACCATCAATGGCAAAGCTTTGGATAACGGTTTCTTCTTCGAC CATTCCAAGTTCAAACCGGGTGGTGAGTTGCACTTCGTGATGACGGGCGATCAATCAGAAGCGATGAAAGCGCCTCAATA A
Upstream 100 bases:
>100_bases AAGCTCAGTAACGTTTTATGTAATTCGTGTTTAAAGAATAAGCAGATAGATTAACTCAGTGGCAGGAAGTGATCCGCTTC CTGCCTAAGGAATCAATATT
Downstream 100 bases:
>100_bases ACCTCTATCACTCTTCACTCTTCCCTCTTCCCTCTTCAAAGGTCAGTTCGCAAGCGCTGACCTTTTTTCATAAACAAATC AATCGATGTTCTGACCAATA
Product: alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Glycosyltransferase; Lipoprotein
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MNFTKTAIATAVIASVIGLAGCNDDDDNTSPSVDTSNLRYVDPFIGTGFNGHTFPGPIAPEGMVQLSPDTELIGWHSSSG YHFDKKTLFGFSHTHLSGTGMGGLGDILFLPFTEDKAKYIEDSDDYREAISVKMDKTSEVAEAGYYSVKIAENGIKAELT ASERVGFHRYTYPQGQPQRLKIDLNSILNSDWGSTSLRNKLTVSEDGHTITGERDAAHFSGWAKNQKIFFYATFDKKIKD VYILANGEPVDGLTAEHVSELIYDDQGNAIKRVKADVTAYIEFEDEGSQELNAQVALSAVDPQGAENNYDAEANVSFDTA RNNAREKWAKALNFSIEGGTEDQKEIFYTALYHTKIAPMVHQDVDGRFRGMGKGSIRGGEGEYSIAYGQATEEQPNFSVY SLWDTQRALHPLKTITEPTRAVQYAKNLVQKYTESGLLPKWEHLGDETGTMVGYPAVAVIADAMTKFPEEFTQQEKELAL KAAIDSSTYDNYPVLQADWDQGVLDRTLTKHIDYIEKNGFTPAIQRIDGEPVFEDYTVESVSYGLENAFYDWAIAQIAKA AGDTQAEEQYLERSKGYKKYFDYNPTEYAEHGVTGFMRPVMIDETFMTPFDPYGTEHETGNYTEGNAWQWTWFVPHDIAG LKTIMGGDAEFQKNLEATFTAESQGTETPDMSGLIGQVAFGNEPSHHIPYLFNWTAEPWKTQQVVDHILDDMYFAAPEGV VGNEDVGAMSAWYVMSALGFYQVNAAEPIYTVGRPLFDKAVIPVKGGTFTITTENNADDNMYIKSVTINGKALDNGFFFD HSKFKPGGELHFVMTGDQSEAMKAPQ
Sequences:
>Translated_826_residues MNFTKTAIATAVIASVIGLAGCNDDDDNTSPSVDTSNLRYVDPFIGTGFNGHTFPGPIAPEGMVQLSPDTELIGWHSSSG YHFDKKTLFGFSHTHLSGTGMGGLGDILFLPFTEDKAKYIEDSDDYREAISVKMDKTSEVAEAGYYSVKIAENGIKAELT ASERVGFHRYTYPQGQPQRLKIDLNSILNSDWGSTSLRNKLTVSEDGHTITGERDAAHFSGWAKNQKIFFYATFDKKIKD VYILANGEPVDGLTAEHVSELIYDDQGNAIKRVKADVTAYIEFEDEGSQELNAQVALSAVDPQGAENNYDAEANVSFDTA RNNAREKWAKALNFSIEGGTEDQKEIFYTALYHTKIAPMVHQDVDGRFRGMGKGSIRGGEGEYSIAYGQATEEQPNFSVY SLWDTQRALHPLKTITEPTRAVQYAKNLVQKYTESGLLPKWEHLGDETGTMVGYPAVAVIADAMTKFPEEFTQQEKELAL KAAIDSSTYDNYPVLQADWDQGVLDRTLTKHIDYIEKNGFTPAIQRIDGEPVFEDYTVESVSYGLENAFYDWAIAQIAKA AGDTQAEEQYLERSKGYKKYFDYNPTEYAEHGVTGFMRPVMIDETFMTPFDPYGTEHETGNYTEGNAWQWTWFVPHDIAG LKTIMGGDAEFQKNLEATFTAESQGTETPDMSGLIGQVAFGNEPSHHIPYLFNWTAEPWKTQQVVDHILDDMYFAAPEGV VGNEDVGAMSAWYVMSALGFYQVNAAEPIYTVGRPLFDKAVIPVKGGTFTITTENNADDNMYIKSVTINGKALDNGFFFD HSKFKPGGELHFVMTGDQSEAMKAPQ >Mature_826_residues MNFTKTAIATAVIASVIGLAGCNDDDDNTSPSVDTSNLRYVDPFIGTGFNGHTFPGPIAPEGMVQLSPDTELIGWHSSSG YHFDKKTLFGFSHTHLSGTGMGGLGDILFLPFTEDKAKYIEDSDDYREAISVKMDKTSEVAEAGYYSVKIAENGIKAELT ASERVGFHRYTYPQGQPQRLKIDLNSILNSDWGSTSLRNKLTVSEDGHTITGERDAAHFSGWAKNQKIFFYATFDKKIKD VYILANGEPVDGLTAEHVSELIYDDQGNAIKRVKADVTAYIEFEDEGSQELNAQVALSAVDPQGAENNYDAEANVSFDTA RNNAREKWAKALNFSIEGGTEDQKEIFYTALYHTKIAPMVHQDVDGRFRGMGKGSIRGGEGEYSIAYGQATEEQPNFSVY SLWDTQRALHPLKTITEPTRAVQYAKNLVQKYTESGLLPKWEHLGDETGTMVGYPAVAVIADAMTKFPEEFTQQEKELAL KAAIDSSTYDNYPVLQADWDQGVLDRTLTKHIDYIEKNGFTPAIQRIDGEPVFEDYTVESVSYGLENAFYDWAIAQIAKA AGDTQAEEQYLERSKGYKKYFDYNPTEYAEHGVTGFMRPVMIDETFMTPFDPYGTEHETGNYTEGNAWQWTWFVPHDIAG LKTIMGGDAEFQKNLEATFTAESQGTETPDMSGLIGQVAFGNEPSHHIPYLFNWTAEPWKTQQVVDHILDDMYFAAPEGV VGNEDVGAMSAWYVMSALGFYQVNAAEPIYTVGRPLFDKAVIPVKGGTFTITTENNADDNMYIKSVTINGKALDNGFFFD HSKFKPGGELHFVMTGDQSEAMKAPQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91684; Mature: 91684
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFTKTAIATAVIASVIGLAGCNDDDDNTSPSVDTSNLRYVDPFIGTGFNGHTFPGPIAP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCCCCCCCCC EGMVQLSPDTELIGWHSSSGYHFDKKTLFGFSHTHLSGTGMGGLGDILFLPFTEDKAKYI CCEEEECCCCCEEEEECCCCCEECCCEEECEEECEECCCCCCCCCCEEEEECCCCHHHHC EDSDDYREAISVKMDKTSEVAEAGYYSVKIAENGIKAELTASERVGFHRYTYPQGQPQRL CCCHHHHHHHEEEECCCHHHHHCCEEEEEEECCCCEEEEEHHHCCCCEEECCCCCCCCEE KIDLNSILNSDWGSTSLRNKLTVSEDGHTITGERDAAHFSGWAKNQKIFFYATFDKKIKD EEEHHHHHCCCCCCCCCCCCEEECCCCCEECCCCCCHHHCCCCCCCEEEEEEECCCCCEE VYILANGEPVDGLTAEHVSELIYDDQGNAIKRVKADVTAYIEFEDEGSQELNAQVALSAV EEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCCCCCCCCEEEEEEC DPQGAENNYDAEANVSFDTARNNAREKWAKALNFSIEGGTEDQKEIFYTALYHTKIAPMV CCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCHHH HQDVDGRFRGMGKGSIRGGEGEYSIAYGQATEEQPNFSVYSLWDTQRALHPLKTITEPTR HCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHH AVQYAKNLVQKYTESGLLPKWEHLGDETGTMVGYPAVAVIADAMTKFPEEFTQQEKELAL HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KAAIDSSTYDNYPVLQADWDQGVLDRTLTKHIDYIEKNGFTPAIQRIDGEPVFEDYTVES HHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHH VSYGLENAFYDWAIAQIAKAAGDTQAEEQYLERSKGYKKYFDYNPTEYAEHGVTGFMRPV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHCCCHHHCCCE MIDETFMTPFDPYGTEHETGNYTEGNAWQWTWFVPHDIAGLKTIMGGDAEFQKNLEATFT EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHCCCCEEEE AESQGTETPDMSGLIGQVAFGNEPSHHIPYLFNWTAEPWKTQQVVDHILDDMYFAAPEGV ECCCCCCCCCCCCHHEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC VGNEDVGAMSAWYVMSALGFYQVNAAEPIYTVGRPLFDKAVIPVKGGTFTITTENNADDN CCCCCCCHHHHHHHHHHHCEEEECCCCCHHHCCCCHHCCEEEEECCCEEEEEECCCCCCC MYIKSVTINGKALDNGFFFDHSKFKPGGELHFVMTGDQSEAMKAPQ EEEEEEEECCEEECCCEEECCCCCCCCCCEEEEEECCHHHHCCCCC >Mature Secondary Structure MNFTKTAIATAVIASVIGLAGCNDDDDNTSPSVDTSNLRYVDPFIGTGFNGHTFPGPIAP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCCCCCCCCC EGMVQLSPDTELIGWHSSSGYHFDKKTLFGFSHTHLSGTGMGGLGDILFLPFTEDKAKYI CCEEEECCCCCEEEEECCCCCEECCCEEECEEECEECCCCCCCCCCEEEEECCCCHHHHC EDSDDYREAISVKMDKTSEVAEAGYYSVKIAENGIKAELTASERVGFHRYTYPQGQPQRL CCCHHHHHHHEEEECCCHHHHHCCEEEEEEECCCCEEEEEHHHCCCCEEECCCCCCCCEE KIDLNSILNSDWGSTSLRNKLTVSEDGHTITGERDAAHFSGWAKNQKIFFYATFDKKIKD EEEHHHHHCCCCCCCCCCCCEEECCCCCEECCCCCCHHHCCCCCCCEEEEEEECCCCCEE VYILANGEPVDGLTAEHVSELIYDDQGNAIKRVKADVTAYIEFEDEGSQELNAQVALSAV EEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCCCCCCCCEEEEEEC DPQGAENNYDAEANVSFDTARNNAREKWAKALNFSIEGGTEDQKEIFYTALYHTKIAPMV CCCCCCCCCCCCCCEEEHHHHCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCHHH HQDVDGRFRGMGKGSIRGGEGEYSIAYGQATEEQPNFSVYSLWDTQRALHPLKTITEPTR HCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHH AVQYAKNLVQKYTESGLLPKWEHLGDETGTMVGYPAVAVIADAMTKFPEEFTQQEKELAL HHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH KAAIDSSTYDNYPVLQADWDQGVLDRTLTKHIDYIEKNGFTPAIQRIDGEPVFEDYTVES HHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHH VSYGLENAFYDWAIAQIAKAAGDTQAEEQYLERSKGYKKYFDYNPTEYAEHGVTGFMRPV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHCCCHHHCCCE MIDETFMTPFDPYGTEHETGNYTEGNAWQWTWFVPHDIAGLKTIMGGDAEFQKNLEATFT EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHCCCCEEEE AESQGTETPDMSGLIGQVAFGNEPSHHIPYLFNWTAEPWKTQQVVDHILDDMYFAAPEGV ECCCCCCCCCCCCHHEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC VGNEDVGAMSAWYVMSALGFYQVNAAEPIYTVGRPLFDKAVIPVKGGTFTITTENNADDN CCCCCCCHHHHHHHHHHHCEEEECCCCCHHHCCCCHHCCEEEEECCCEEEEEECCCCCCC MYIKSVTINGKALDNGFFFDHSKFKPGGELHFVMTGDQSEAMKAPQ EEEEEEEECCEEECCCEEECCCCCCCCCCEEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA