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The map label for this gene is yrhP [H]

Identifier: 156977817

GI number: 156977817

Start: 1755302

End: 1755913

Strand: Direct

Name: yrhP [H]

Synonym: VIBHAR_06605

Alternate gene names: 156977817

Gene position: 1755302-1755913 (Clockwise)

Preceding gene: 156977814

Following gene: 156977818

Centisome position: 79.64

GC content: 44.61

Gene sequence:

>612_bases
ATGGAGCTTTTCAGCCTTGCCTTATTGGGCATACTCATTGTCATCAGTCCCGGAGCCGATTTTGTATTGGTTCTTAGAAA
CAGCCTCAACAGGGGCAGACAAGCGGGAATTTGGAGTGCCGTGGGCATTAGTCTTGCGATTTCGGTGCACATTACCTATT
CATTGCTTGGCATCAGTTACTTAATTTCACAGAACGAATGGTTGTTCAGCTTGATTCGCTACCTAGGTGCGGCTTATCTG
ATCTATCTCGGATTGAAAGGGATTTTTGGGGCCGATTCTCAACAGAAAATAGAGGGGGAAACACAAGAAAGCATCTCCAT
TTGGCAGTTCTTTTTCCAAGGCTTTTTGTGCAATGTACTTAACCCAAAAACCATGTTGTTCTTCTTGAGTATCTTTAGCC
AAGTCATCGATCCGAATACAGAATCGCAGCACCTAGCTTTGGGTTACGGTGTCTACATGATTGCGCTACACGGGATTTGG
TTTTCTATGGTTGCCATCTTGTTTACCTCACCGCGATTACAGAGCTTATTACTGCGCGTGAAACATAGGTTGAACCAAGC
TTGTGGCGCTGGATTATTGGTGTTTGGTGCCATGTTGGGATTGAAGTCATAA

Upstream 100 bases:

>100_bases
TGACTTTTTCTCACACTTAGTGGAATTTGTTTCGATTATAGTCTCCGAACTCTCGACCTACAATTGCCCTATTCATAACA
ACGAAGAAACAGGAAACACC

Downstream 100 bases:

>100_bases
CACGCTGAGTTACGACATTTCGACCGATGCCACATCGAAGTTTGATAATCGCACGTATAATCTTCGTCAGAACGATTAAG
GGCAATTGACCTTGAGGAAA

Product: putative threonine efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MELFSLALLGILIVISPGADFVLVLRNSLNRGRQAGIWSAVGISLAISVHITYSLLGISYLISQNEWLFSLIRYLGAAYL
IYLGLKGIFGADSQQKIEGETQESISIWQFFFQGFLCNVLNPKTMLFFLSIFSQVIDPNTESQHLALGYGVYMIALHGIW
FSMVAILFTSPRLQSLLLRVKHRLNQACGAGLLVFGAMLGLKS

Sequences:

>Translated_203_residues
MELFSLALLGILIVISPGADFVLVLRNSLNRGRQAGIWSAVGISLAISVHITYSLLGISYLISQNEWLFSLIRYLGAAYL
IYLGLKGIFGADSQQKIEGETQESISIWQFFFQGFLCNVLNPKTMLFFLSIFSQVIDPNTESQHLALGYGVYMIALHGIW
FSMVAILFTSPRLQSLLLRVKHRLNQACGAGLLVFGAMLGLKS
>Mature_203_residues
MELFSLALLGILIVISPGADFVLVLRNSLNRGRQAGIWSAVGISLAISVHITYSLLGISYLISQNEWLFSLIRYLGAAYL
IYLGLKGIFGADSQQKIEGETQESISIWQFFFQGFLCNVLNPKTMLFFLSIFSQVIDPNTESQHLALGYGVYMIALHGIW
FSMVAILFTSPRLQSLLLRVKHRLNQACGAGLLVFGAMLGLKS

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=177, Percent_Identity=29.3785310734463, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1786522, Length=186, Percent_Identity=28.494623655914, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI48994978, Length=200, Percent_Identity=27.5, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI48994979, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22468; Mature: 22468

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFSLALLGILIVISPGADFVLVLRNSLNRGRQAGIWSAVGISLAISVHITYSLLGISY
CHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LISQNEWLFSLIRYLGAAYLIYLGLKGIFGADSQQKIEGETQESISIWQFFFQGFLCNVL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHC
NPKTMLFFLSIFSQVIDPNTESQHLALGYGVYMIALHGIWFSMVAILFTSPRLQSLLLRV
CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KHRLNQACGAGLLVFGAMLGLKS
HHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MELFSLALLGILIVISPGADFVLVLRNSLNRGRQAGIWSAVGISLAISVHITYSLLGISY
CHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LISQNEWLFSLIRYLGAAYLIYLGLKGIFGADSQQKIEGETQESISIWQFFFQGFLCNVL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHC
NPKTMLFFLSIFSQVIDPNTESQHLALGYGVYMIALHGIWFSMVAILFTSPRLQSLLLRV
CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KHRLNQACGAGLLVFGAMLGLKS
HHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]