| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977805
Identifier: 156977805
GI number: 156977805
Start: 1737074
End: 1738384
Strand: Direct
Name: 156977805
Synonym: VIBHAR_06593
Alternate gene names: NA
Gene position: 1737074-1738384 (Clockwise)
Preceding gene: 156977804
Following gene: 156977806
Centisome position: 78.81
GC content: 50.19
Gene sequence:
>1311_bases ATGAAATTCAAACCTTCCCTACTCGCTTGCGCAGTTCTCAGTGGTTTAGTCGGTCTGACTGGCTGTAACGACGACACAAC CAACATTTATGAAGGCGGTGACACCAACCCTGCACTGCTGGATATTCCTGACGGCGGCAAGCCAGTATGTCCTCCAGTTG GCGATGGCGACTGCGATGACAAGCCAAACCCAGAAACACCTGAAATCGACATGGGCGTTCACATCCCGGTAGACTTCGCC GATATGGACGTAACACGCTACGTCAACCCATTCATCGGCACAGGTAACCTAGGCAACACCTACCCTGGTGCAACCACACC ACACGGCATGGTGCAGCTTTCTCCAAACAACGGTTCTAACGGCTGGGAATACATTTCAGGCTACTACTACCACGACGCAC GTACTTCCGGTTTCTCTCATACCCACCTTTCCGGAGCAGGTGCTGGCGACTTGAACGACATTCTCGTCATGCCAATCAAC TCGCGTTCGGATTACATGATTGATGAAGGTTCGGCAACGCTAAACCTAGAAGCGTCTCGCTTCCAACATCGTGACGAGCA AGCGACAGCTGGTTACTACAAAGTCGATCTATTGGATTACGACATCAAAGCTGAGTTAACGGCGTCTGATCGCGTTGGTG TACACCGCTACACCTTCCCTCGTGATGAGAAGTCAGAAATCATCGTGAACACTGGCTTCAAAATTAACTGGGACTACACC TCAGATTCTTACTTGAAATGGGACAAAGACAATAACCGTCTTGAAGGTCACCGTTTCTCTGACGGCTGGGCACCAAGCCA AAAAGAATTCTTCGTGATGGAATTCGACCAGCCAATCAAAAACGTTCGCTTTGCTTACTACGATAAAGAGCAAGGTCGTT ACATGGACGTGCCAGAAGGCATTACGGAAATCGGTAACGAGACACGCGGCAAGTACCAATACGCGCGCGCTTACGTAGAG TTCGACACATCCAAAGACGGCTTAACGGTTGAAGCGAAATTAGCGCTATCAAACGTTGAGATTGGCGAGAATGGCAAGTC TGGTGCTTCTCTTAACATGACAGAAGTTGCTGGCATGAACTTCGACCAAGTACGCGAAGCGGCAACGAAGAAATGGGAAG ACGAACTCGGCAAGATCCAAGTCTCTGGCGACGAAGATTACAAACAGACGTTCTACACCGCGATGTACCACTCGTACCTA GGTCAAACCATTCACTCTGACTTAGATGGTCGCTACCGCCAAGTTCACCAAGGTCGTAACGCATACCCTGATGGCAACAC ACCTTGGGGCGTGCGACGTGAGGTCGTATGA
Upstream 100 bases:
>100_bases GAGCCCTTTCCCCCAAAGGGCTCTATTTCAAGTTTTTAAGTTTTAGTAATACCCCTGATTTTTTTAATTATATAACCCTA CAGTTTACAAGGCTTTAAAA
Downstream 100 bases:
>100_bases AGCGCTGTTCACCGCTCAACGAGTGAACCATCTGTATCACCAGATGAACCTAGGACTCTGAATAAAGTAGCGAGTCTGAC AATGTAACGAAGGTTGGCAT
Product: alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKFKPSLLACAVLSGLVGLTGCNDDTTNIYEGGDTNPALLDIPDGGKPVCPPVGDGDCDDKPNPETPEIDMGVHIPVDFA DMDVTRYVNPFIGTGNLGNTYPGATTPHGMVQLSPNNGSNGWEYISGYYYHDARTSGFSHTHLSGAGAGDLNDILVMPIN SRSDYMIDEGSATLNLEASRFQHRDEQATAGYYKVDLLDYDIKAELTASDRVGVHRYTFPRDEKSEIIVNTGFKINWDYT SDSYLKWDKDNNRLEGHRFSDGWAPSQKEFFVMEFDQPIKNVRFAYYDKEQGRYMDVPEGITEIGNETRGKYQYARAYVE FDTSKDGLTVEAKLALSNVEIGENGKSGASLNMTEVAGMNFDQVREAATKKWEDELGKIQVSGDEDYKQTFYTAMYHSYL GQTIHSDLDGRYRQVHQGRNAYPDGNTPWGVRREVV
Sequences:
>Translated_436_residues MKFKPSLLACAVLSGLVGLTGCNDDTTNIYEGGDTNPALLDIPDGGKPVCPPVGDGDCDDKPNPETPEIDMGVHIPVDFA DMDVTRYVNPFIGTGNLGNTYPGATTPHGMVQLSPNNGSNGWEYISGYYYHDARTSGFSHTHLSGAGAGDLNDILVMPIN SRSDYMIDEGSATLNLEASRFQHRDEQATAGYYKVDLLDYDIKAELTASDRVGVHRYTFPRDEKSEIIVNTGFKINWDYT SDSYLKWDKDNNRLEGHRFSDGWAPSQKEFFVMEFDQPIKNVRFAYYDKEQGRYMDVPEGITEIGNETRGKYQYARAYVE FDTSKDGLTVEAKLALSNVEIGENGKSGASLNMTEVAGMNFDQVREAATKKWEDELGKIQVSGDEDYKQTFYTAMYHSYL GQTIHSDLDGRYRQVHQGRNAYPDGNTPWGVRREVV >Mature_436_residues MKFKPSLLACAVLSGLVGLTGCNDDTTNIYEGGDTNPALLDIPDGGKPVCPPVGDGDCDDKPNPETPEIDMGVHIPVDFA DMDVTRYVNPFIGTGNLGNTYPGATTPHGMVQLSPNNGSNGWEYISGYYYHDARTSGFSHTHLSGAGAGDLNDILVMPIN SRSDYMIDEGSATLNLEASRFQHRDEQATAGYYKVDLLDYDIKAELTASDRVGVHRYTFPRDEKSEIIVNTGFKINWDYT SDSYLKWDKDNNRLEGHRFSDGWAPSQKEFFVMEFDQPIKNVRFAYYDKEQGRYMDVPEGITEIGNETRGKYQYARAYVE FDTSKDGLTVEAKLALSNVEIGENGKSGASLNMTEVAGMNFDQVREAATKKWEDELGKIQVSGDEDYKQTFYTAMYHSYL GQTIHSDLDGRYRQVHQGRNAYPDGNTPWGVRREVV
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48663; Mature: 48663
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKPSLLACAVLSGLVGLTGCNDDTTNIYEGGDTNPALLDIPDGGKPVCPPVGDGDCDD CCCCCHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC KPNPETPEIDMGVHIPVDFADMDVTRYVNPFIGTGNLGNTYPGATTPHGMVQLSPNNGSN CCCCCCCCEECEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC GWEYISGYYYHDARTSGFSHTHLSGAGAGDLNDILVMPINSRSDYMIDEGSATLNLEASR CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEEHHH FQHRDEQATAGYYKVDLLDYDIKAELTASDRVGVHRYTFPRDEKSEIIVNTGFKINWDYT HHCCCCCCCCCEEEEEEEEECEEEEEECCCCCCEEEEECCCCCCCEEEEECCEEEEEECC SDSYLKWDKDNNRLEGHRFSDGWAPSQKEFFVMEFDQPIKNVRFAYYDKEQGRYMDVPEG CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCEEEEEECCCCCEECCCHH ITEIGNETRGKYQYARAYVEFDTSKDGLTVEAKLALSNVEIGENGKSGASLNMTEVAGMN HHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEHHHHCCCC FDQVREAATKKWEDELGKIQVSGDEDYKQTFYTAMYHSYLGQTIHSDLDGRYRQVHQGRN HHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC AYPDGNTPWGVRREVV CCCCCCCCCCCEECCC >Mature Secondary Structure MKFKPSLLACAVLSGLVGLTGCNDDTTNIYEGGDTNPALLDIPDGGKPVCPPVGDGDCDD CCCCCHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC KPNPETPEIDMGVHIPVDFADMDVTRYVNPFIGTGNLGNTYPGATTPHGMVQLSPNNGSN CCCCCCCCEECEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC GWEYISGYYYHDARTSGFSHTHLSGAGAGDLNDILVMPINSRSDYMIDEGSATLNLEASR CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEEHHH FQHRDEQATAGYYKVDLLDYDIKAELTASDRVGVHRYTFPRDEKSEIIVNTGFKINWDYT HHCCCCCCCCCEEEEEEEEECEEEEEECCCCCCEEEEECCCCCCCEEEEECCEEEEEECC SDSYLKWDKDNNRLEGHRFSDGWAPSQKEFFVMEFDQPIKNVRFAYYDKEQGRYMDVPEG CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCEEEEEECCCCCEECCCHH ITEIGNETRGKYQYARAYVEFDTSKDGLTVEAKLALSNVEIGENGKSGASLNMTEVAGMN HHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCEEEHHHHCCCC FDQVREAATKKWEDELGKIQVSGDEDYKQTFYTAMYHSYLGQTIHSDLDGRYRQVHQGRN HHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC AYPDGNTPWGVRREVV CCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA