| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is proX [C]
Identifier: 156977774
GI number: 156977774
Start: 1711917
End: 1712909
Strand: Direct
Name: proX [C]
Synonym: VIBHAR_06562
Alternate gene names: 156977774
Gene position: 1711917-1712909 (Clockwise)
Preceding gene: 156977773
Following gene: 156977775
Centisome position: 77.67
GC content: 48.24
Gene sequence:
>993_bases ATGACGTACAAAACTCCCTTACTACTAGCGATTGGTGCGCTAGCAGCAACCAACGCAAACGCAAGTGAGTGTGGAACGGT TACCATTGCAGATATGAACTGGAACTCTGCAACACTGATTGCCAATGTGGACCGTTTTATTCTTGAGCACGGCTACGGCT GTGATGCCGAACTCATCCCTGGCGACACCATGCCGACAGGCACATCAATGATTGAAAAAGGACAGCCTGATGTGGCGCCT GAACTGTGGAGTAACAGCCTTAAAGACGCGCTAGACAAAGGTGTCGAAGAAAAACGCCTACGCTATGCAGGTAAAGCGCT CGTCGATGGTGGTGAAGAAGGATTCTGGATCCCAGCCTATCTTGTTAAACAATACCCTGAAATGAAAACCATCGAAGGTG TGAAAAAGCACGCGAAGTTATTCTCTCATCCTGAAGACAAAGCAAAATCGGCATTTTACAGCTGTCCTGCCGGTTGGAAC TGTCAAATTAGCGCCGGCAATCTTTTCAAAGCGATGAATCTTGCTGACGCAGGCTTCGACATCATCGACCCAGGTTCAAG TGCCGGTCTGTCTGGCTCAATTGCAAAAGCCTACGAGCGTGAAGAAGCGTGGTTCGGTTACTACTGGGCACCTACTGCGG TTCTTGGTAAATACGACATGGTAAAAGTGGATTTTGGTAGCGGCGTTGATGAGAAAGAGTTCGTCAGCTGTACAACACAA ACAGACTGTGAAAATCCAAAAGCAACCATGTACCCACCTTCACCAGTCCATACCATTACGACTGAGGAGTTTGCTTCACG CTCTCCAGCCGCTTACGACTACTTCACTAAGCGTGGCTTCACCAATGCGGACATGAACCAGCTATTAGCTTGGATGGAAG ACAACCAAGCAGACGGTGAGGAAACCATGTTCCATTTCCTAGAAAATTACCCGCAGATCTGGAACGCATGGGTTCCACAA GACGTAGCTAAAAAAGTGCAAGGTGCACTGTAA
Upstream 100 bases:
>100_bases TTGTTAACAAATAAAGCTATAATTCACCCAACACATTAGTTTGAACACTAATGATTAATTCGTTACCCTAAGTGAGCTAT TTAGAGAAAGGAAACTCAAT
Downstream 100 bases:
>100_bases GACTTAGACGTTTCGTAAATGGTATAGGAATACCAAAATTGTTGTATGCCGAGGCTCGCTTGAGCCTCGGCAAGAAAAGG AAGTAAACATGTCTGACTCG
Product: hypothetical protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTYKTPLLLAIGALAATNANASECGTVTIADMNWNSATLIANVDRFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAP ELWSNSLKDALDKGVEEKRLRYAGKALVDGGEEGFWIPAYLVKQYPEMKTIEGVKKHAKLFSHPEDKAKSAFYSCPAGWN CQISAGNLFKAMNLADAGFDIIDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVDEKEFVSCTTQ TDCENPKATMYPPSPVHTITTEEFASRSPAAYDYFTKRGFTNADMNQLLAWMEDNQADGEETMFHFLENYPQIWNAWVPQ DVAKKVQGAL
Sequences:
>Translated_330_residues MTYKTPLLLAIGALAATNANASECGTVTIADMNWNSATLIANVDRFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAP ELWSNSLKDALDKGVEEKRLRYAGKALVDGGEEGFWIPAYLVKQYPEMKTIEGVKKHAKLFSHPEDKAKSAFYSCPAGWN CQISAGNLFKAMNLADAGFDIIDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVDEKEFVSCTTQ TDCENPKATMYPPSPVHTITTEEFASRSPAAYDYFTKRGFTNADMNQLLAWMEDNQADGEETMFHFLENYPQIWNAWVPQ DVAKKVQGAL >Mature_329_residues TYKTPLLLAIGALAATNANASECGTVTIADMNWNSATLIANVDRFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAPE LWSNSLKDALDKGVEEKRLRYAGKALVDGGEEGFWIPAYLVKQYPEMKTIEGVKKHAKLFSHPEDKAKSAFYSCPAGWNC QISAGNLFKAMNLADAGFDIIDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVDEKEFVSCTTQT DCENPKATMYPPSPVHTITTEEFASRSPAAYDYFTKRGFTNADMNQLLAWMEDNQADGEETMFHFLENYPQIWNAWVPQD VAKKVQGAL
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36278; Mature: 36147
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKTPLLLAIGALAATNANASECGTVTIADMNWNSATLIANVDRFILEHGYGCDAELIP CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCEECC GDTMPTGTSMIEKGQPDVAPELWSNSLKDALDKGVEEKRLRYAGKALVDGGEEGFWIPAY CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHHH LVKQYPEMKTIEGVKKHAKLFSHPEDKAKSAFYSCPAGWNCQISAGNLFKAMNLADAGFD HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC IIDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVDEKEFVSCTTQ EECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHCCCEEEEEECCCCCCHHHHEEECCC TDCENPKATMYPPSPVHTITTEEFASRSPAAYDYFTKRGFTNADMNQLLAWMEDNQADGE CCCCCCCCCCCCCCCCEEEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHH ETMFHFLENYPQIWNAWVPQDVAKKVQGAL HHHHHHHHHCHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure TYKTPLLLAIGALAATNANASECGTVTIADMNWNSATLIANVDRFILEHGYGCDAELIP CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCEECC GDTMPTGTSMIEKGQPDVAPELWSNSLKDALDKGVEEKRLRYAGKALVDGGEEGFWIPAY CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHHH LVKQYPEMKTIEGVKKHAKLFSHPEDKAKSAFYSCPAGWNCQISAGNLFKAMNLADAGFD HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC IIDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVDEKEFVSCTTQ EECCCCCCCCCCHHHHHHHHHCCEEEEEECCHHHHCCCEEEEEECCCCCCHHHHEEECCC TDCENPKATMYPPSPVHTITTEEFASRSPAAYDYFTKRGFTNADMNQLLAWMEDNQADGE CCCCCCCCCCCCCCCCEEEEHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHH ETMFHFLENYPQIWNAWVPQDVAKKVQGAL HHHHHHHHHCHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA