Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977769

Identifier: 156977769

GI number: 156977769

Start: 1708284

End: 1709306

Strand: Direct

Name: 156977769

Synonym: VIBHAR_06557

Alternate gene names: NA

Gene position: 1708284-1709306 (Clockwise)

Preceding gene: 156977768

Following gene: 156977770

Centisome position: 77.51

GC content: 48.48

Gene sequence:

>1023_bases
ATGACAGAGGGAACCATCATGCAAATTGCTCAACCTTACCTACTTTTTCTTGGCGACGTCACCGATCCATTAGCCGCAAA
AACTGCACGCGGTATCCATCAATGGCGCCCAGAGATTTGCTTAGGTCAGCTTCGTCTTACGCCAGAAACTGTTTCATTAG
GTTTAACCGACATGACGCTGCAACAAGCTCAGCAGCAAGGCGCAAAAACGCTCGTCATCGGTACAGCAAACCCTGGTGGT
GTTATTCCTGAATCATGGCAGGCGACGTTACTGGAAGCGGCGGAAATGGGTTTTGAAATTGCCTCTGGTATGCATCAACG
TCTTTCTGAATTTGCGCCTTTGAATGACTTACAGCAACGTGACCTAACCAAGTTGCACGATGTACGCCATTACGATGAAC
CGCTTAAAGTGGGCAATGGTAAAGCGCGCTCGGGTAAACGCTTACTAACGGTTGGCACTGACTGCTCGGTTGGAAAAATG
TTCTCAGCCCTCGCGATTGAGAAGGCCTTGCAGCAAGCTGGTTGTAAAGCTGAGTTCAAGGCTACAGGTCAAACGGGCAT
CTTAGTCGCGGGCAGTGGTATTTCGATTGATGCGGTTGTCGCGGACTTTATCTCTGGTGCAGTAGAAGCCATTAGCCCTG
AGTTTACTGACCACGAATGGGACATCATTGAAGGGCAAGGTTCACTGTTCAATCCCTCTTTTGCTGGCGTGAGTTTAGGC
TTGCTTCACGGTGCACAAGCAGACGCTTTGGTATTGTGTCACGAGATCGGTCGCCCACACATTCGCAACCTTCCTCATGC
TAAGTTGCCAACGATTGAGCAAACCATCGAAGCGAATTTACAAGCTGCACGTTTAACAAACTCTGACACACGTCTTGTCG
GAATCTGCTTGAATACTTCTGCAATCAGTGAAGATGATGCCGCACAGCTTTGCCAAGACTGGACTGAGAAATACCAAGTA
CCTGTCACCGATCCTGTGCGTTTTGGCGTAGAGCAAATTGCTCAAAAGATTATTGCGATTTAA

Upstream 100 bases:

>100_bases
TTAGCACTCATGCCCACCTATAACTTCAAGTTATAGGCGCACAACAAATAGGCATTCGGCTTCCTTCTTCAAACTGACTA
CATTGTCTGAAAACGTACGA

Downstream 100 bases:

>100_bases
GGATTGTAGACGCGATGAAAATTCATGTAGAGCCTGTCACCATTGCGATGGCGACGCCTTTCCGTATATCACGTGGCAGC
CGAACCGAATGTCACGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTEGTIMQIAQPYLLFLGDVTDPLAAKTARGIHQWRPEICLGQLRLTPETVSLGLTDMTLQQAQQQGAKTLVIGTANPGG
VIPESWQATLLEAAEMGFEIASGMHQRLSEFAPLNDLQQRDLTKLHDVRHYDEPLKVGNGKARSGKRLLTVGTDCSVGKM
FSALAIEKALQQAGCKAEFKATGQTGILVAGSGISIDAVVADFISGAVEAISPEFTDHEWDIIEGQGSLFNPSFAGVSLG
LLHGAQADALVLCHEIGRPHIRNLPHAKLPTIEQTIEANLQAARLTNSDTRLVGICLNTSAISEDDAAQLCQDWTEKYQV
PVTDPVRFGVEQIAQKIIAI

Sequences:

>Translated_340_residues
MTEGTIMQIAQPYLLFLGDVTDPLAAKTARGIHQWRPEICLGQLRLTPETVSLGLTDMTLQQAQQQGAKTLVIGTANPGG
VIPESWQATLLEAAEMGFEIASGMHQRLSEFAPLNDLQQRDLTKLHDVRHYDEPLKVGNGKARSGKRLLTVGTDCSVGKM
FSALAIEKALQQAGCKAEFKATGQTGILVAGSGISIDAVVADFISGAVEAISPEFTDHEWDIIEGQGSLFNPSFAGVSLG
LLHGAQADALVLCHEIGRPHIRNLPHAKLPTIEQTIEANLQAARLTNSDTRLVGICLNTSAISEDDAAQLCQDWTEKYQV
PVTDPVRFGVEQIAQKIIAI
>Mature_339_residues
TEGTIMQIAQPYLLFLGDVTDPLAAKTARGIHQWRPEICLGQLRLTPETVSLGLTDMTLQQAQQQGAKTLVIGTANPGGV
IPESWQATLLEAAEMGFEIASGMHQRLSEFAPLNDLQQRDLTKLHDVRHYDEPLKVGNGKARSGKRLLTVGTDCSVGKMF
SALAIEKALQQAGCKAEFKATGQTGILVAGSGISIDAVVADFISGAVEAISPEFTDHEWDIIEGQGSLFNPSFAGVSLGL
LHGAQADALVLCHEIGRPHIRNLPHAKLPTIEQTIEANLQAARLTNSDTRLVGICLNTSAISEDDAAQLCQDWTEKYQVP
VTDPVRFGVEQIAQKIIAI

Specific function: Unknown

COG id: COG3367

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36565; Mature: 36434

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGTIMQIAQPYLLFLGDVTDPLAAKTARGIHQWRPEICLGQLRLTPETVSLGLTDMTL
CCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCHHHHHHHEEECHHHHHCCCHHHHH
QQAQQQGAKTLVIGTANPGGVIPESWQATLLEAAEMGFEIASGMHQRLSEFAPLNDLQQR
HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DLTKLHDVRHYDEPLKVGNGKARSGKRLLTVGTDCSVGKMFSALAIEKALQQAGCKAEFK
HHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
ATGQTGILVAGSGISIDAVVADFISGAVEAISPEFTDHEWDIIEGQGSLFNPSFAGVSLG
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHH
LLHGAQADALVLCHEIGRPHIRNLPHAKLPTIEQTIEANLQAARLTNSDTRLVGICLNTS
HHCCCCCCHHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCHHEEECCCCCEEEEEEECCC
AISEDDAAQLCQDWTEKYQVPVTDPVRFGVEQIAQKIIAI
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEGTIMQIAQPYLLFLGDVTDPLAAKTARGIHQWRPEICLGQLRLTPETVSLGLTDMTL
CCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCHHHHHHHEEECHHHHHCCCHHHHH
QQAQQQGAKTLVIGTANPGGVIPESWQATLLEAAEMGFEIASGMHQRLSEFAPLNDLQQR
HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DLTKLHDVRHYDEPLKVGNGKARSGKRLLTVGTDCSVGKMFSALAIEKALQQAGCKAEFK
HHHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
ATGQTGILVAGSGISIDAVVADFISGAVEAISPEFTDHEWDIIEGQGSLFNPSFAGVSLG
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHH
LLHGAQADALVLCHEIGRPHIRNLPHAKLPTIEQTIEANLQAARLTNSDTRLVGICLNTS
HHCCCCCCHHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCHHEEECCCCCEEEEEEECCC
AISEDDAAQLCQDWTEKYQVPVTDPVRFGVEQIAQKIIAI
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA