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The map label for this gene is 156977731

Identifier: 156977731

GI number: 156977731

Start: 1675947

End: 1676768

Strand: Direct

Name: 156977731

Synonym: VIBHAR_06519

Alternate gene names: NA

Gene position: 1675947-1676768 (Clockwise)

Preceding gene: 156977730

Following gene: 156977732

Centisome position: 76.04

GC content: 46.47

Gene sequence:

>822_bases
ATGCCTAACGACGCATTTAACACTCAACTTGCAGAAACAATTTCTGCGCTTAATTCACCAAGCTTTACGCCTAAACTGAT
GCGCGTTATTGCTTCGTTATTGAGTTTTGATTGTGCGGCGGTCCTCGGCTACCGCGAAGGTAAACACCCTATCTATCTGT
ATGATTCAATTGAAAATGAGCGCGAGCTTTTGTTCCAGCGTTATCTCACCACCTCTTTTCAAAACGACCCGTTTTACCAG
AAGCTCAACGCCAACAAAGAGCAAGGCATTTTTACGCTCAAAGATGTGATAGGCAAAGACGTCGCCCGTAACGATCTCGA
TTACCAAGCCTACTGTGAGCAGTTTTACCATCAAACGGGCTGGAAGGACGAACTCAGCATGCTGATCGAAATCGAACCGG
CACGTTGGGTGATGCTCTACTTCGGTTTTATGCAAGATGACAAACGCTTCACCAAGCCTCAAGTCACCAAGCTTAAATCT
TACTTCGCGATTATTCAGTCTTTGTGCCAACAGCACTGGAAACAGACCGAGTTTACACTTGCCGAGCCAGTGTTTAGCCC
TAACGCATATTCAGGGCAAATGCTTACGGCGATTGAATCCGCACTGGCATCGTTTGGCCAAACCGTCCTCACCAAACGAG
AACAAGAAATCGCGGCATTGATCGCACAAGGCTATGACAGCAAAGAGATTGCAACGCAGCTAGATGTCGTAGAAGGGACG
GTTAAGAACCACCGTAAACGCATCTACGCGCAGTTGAATGTCGCATCGTTAAGTGAGTTCTTTCAGTTGTTTCTCAACCA
CCTGATCACTCAATCAAGATAA

Upstream 100 bases:

>100_bases
AACCCACAACGTCGCATGAACAACAAAATAGCAGATAACTTTGGAATACCAGCCCATTGCGTTATGCTTATCTCAACCTT
TATCGCACGCTCGAATTCCC

Downstream 100 bases:

>100_bases
CAAACTGTCCCTTTAGGGATATATCTCGATTCCGCATCGCCTTTTAATCTAAATACAACCAAACCAGATAAAGATAAGAC
GATGACACTGATTGAAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPNDAFNTQLAETISALNSPSFTPKLMRVIASLLSFDCAAVLGYREGKHPIYLYDSIENERELLFQRYLTTSFQNDPFYQ
KLNANKEQGIFTLKDVIGKDVARNDLDYQAYCEQFYHQTGWKDELSMLIEIEPARWVMLYFGFMQDDKRFTKPQVTKLKS
YFAIIQSLCQQHWKQTEFTLAEPVFSPNAYSGQMLTAIESALASFGQTVLTKREQEIAALIAQGYDSKEIATQLDVVEGT
VKNHRKRIYAQLNVASLSEFFQLFLNHLITQSR

Sequences:

>Translated_273_residues
MPNDAFNTQLAETISALNSPSFTPKLMRVIASLLSFDCAAVLGYREGKHPIYLYDSIENERELLFQRYLTTSFQNDPFYQ
KLNANKEQGIFTLKDVIGKDVARNDLDYQAYCEQFYHQTGWKDELSMLIEIEPARWVMLYFGFMQDDKRFTKPQVTKLKS
YFAIIQSLCQQHWKQTEFTLAEPVFSPNAYSGQMLTAIESALASFGQTVLTKREQEIAALIAQGYDSKEIATQLDVVEGT
VKNHRKRIYAQLNVASLSEFFQLFLNHLITQSR
>Mature_272_residues
PNDAFNTQLAETISALNSPSFTPKLMRVIASLLSFDCAAVLGYREGKHPIYLYDSIENERELLFQRYLTTSFQNDPFYQK
LNANKEQGIFTLKDVIGKDVARNDLDYQAYCEQFYHQTGWKDELSMLIEIEPARWVMLYFGFMQDDKRFTKPQVTKLKSY
FAIIQSLCQQHWKQTEFTLAEPVFSPNAYSGQMLTAIESALASFGQTVLTKREQEIAALIAQGYDSKEIATQLDVVEGTV
KNHRKRIYAQLNVASLSEFFQLFLNHLITQSR

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 31483; Mature: 31352

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDAFNTQLAETISALNSPSFTPKLMRVIASLLSFDCAAVLGYREGKHPIYLYDSIENE
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
RELLFQRYLTTSFQNDPFYQKLNANKEQGIFTLKDVIGKDVARNDLDYQAYCEQFYHQTG
HHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
WKDELSMLIEIEPARWVMLYFGFMQDDKRFTKPQVTKLKSYFAIIQSLCQQHWKQTEFTL
CHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEPVFSPNAYSGQMLTAIESALASFGQTVLTKREQEIAALIAQGYDSKEIATQLDVVEGT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VKNHRKRIYAQLNVASLSEFFQLFLNHLITQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNDAFNTQLAETISALNSPSFTPKLMRVIASLLSFDCAAVLGYREGKHPIYLYDSIENE
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
RELLFQRYLTTSFQNDPFYQKLNANKEQGIFTLKDVIGKDVARNDLDYQAYCEQFYHQTG
HHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
WKDELSMLIEIEPARWVMLYFGFMQDDKRFTKPQVTKLKSYFAIIQSLCQQHWKQTEFTL
CHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEPVFSPNAYSGQMLTAIESALASFGQTVLTKREQEIAALIAQGYDSKEIATQLDVVEGT
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VKNHRKRIYAQLNVASLSEFFQLFLNHLITQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7789814 [H]