| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is nemA [H]
Identifier: 156977710
GI number: 156977710
Start: 1650629
End: 1651720
Strand: Direct
Name: nemA [H]
Synonym: VIBHAR_06498
Alternate gene names: 156977710
Gene position: 1650629-1651720 (Clockwise)
Preceding gene: 156977709
Following gene: 156977711
Centisome position: 74.89
GC content: 50.55
Gene sequence:
>1092_bases ATGAGCAAACTATTTGAACCAGCACAGCTAAAACAACTGGATCTACAAAACCGCGTAGTCATGGCACCAATGACCCGAGC GCGCACCAGCCAACCGGGGAATATCCCAAACCAAATGATGGCGACTTACTACAAGCAGCGCGCAACCGCAGGGTTAATCA TCTCTGAAGCCACCCAGATTTCAGACGATTCGCAGGGTTACTCGTTCACACCAGGCGTCTACACTGATGAACAAGTGGCA GGCTGGAAAACCGTCACTCAAGCAGCAAAAGAGCAAGGCGCAGCGATGTTTTGTCAGTTATGGCATGTTGGCCGTGTATC ACACCCGACATTCCAAAAAGGCGAACAGCCTATTGCCCCATCAGCACTAAAACCCGTAGAAACCCAAGTGTGGATTGCCG ACGAACAAGGCAATGGCAGCATGGTCGATTGTGTAGAGCCACGAGCCATGACTCAAGCCGATATTGACCGTGTGGTAAGG GATTTTGCCCATGCAGCGAAACGTGCGATTGAAGCTGGCTTCGATGGCGTCGAAATCCACGGCGGTAATGGTTACCTGAT TGACCAGTTCCTACGTACCAATTCAAACCACAGAACCGATAACTACGGCGGAACTCGCGAAAACCGACTTCGCTTTTTGT TAGAAGTGGTCGATGCGGTGAGCGAAGCCATTGGGGCCAACAAAGTGGGAGTACGACTAGCGCCATTCATCACTTTCAAG GACATGAACTGCCCAGACATTGTGCCAACCATCCTCGAGGCATCGAAACAACTTCAAGCTCGTGATATTGCGTACTTGCA TCTGTCTGAAGCGGATTGGGACGACGCACCAGTGATTCCAGAAAGCTTCCGCATCGAACTGCGCGAATACTTCACCAATA CGATTATCGTGGCTGGCAGTTACACCCAAGATCGTGCTGACGAGGTACTTGAAAAAGGTTATGCGGATTTAGTCGCTTTT GGACGCCCGTTTGTTTCTAACCCAGATTTGGTGGCGCGCTTACAGCATCAACAACCTCTGGCAGAACTGGATGGTTCAAC ACTATTTGGTGGCAATGAACACGGCTATACCGATTATCCGGCGCTTGGTTGA
Upstream 100 bases:
>100_bases TTCAGTGCCGCAGAAATCCAATGGGACAACACCGTGAAAGATTGGATGGAATCGGTAAGCAGCAAAACCCAAGTGCCACT GCTTAAGTAAGGAGCCGATA
Downstream 100 bases:
>100_bases AAGGTTTTACCCGCTTCTGAAAAGGCTTTACCCGCTTCTGATAGCGATTCATAGCGTGCCGTATTTCTCAAATTAATCAG TTGTTATCCCATAAAGAGAA
Product: NADH-flavin oxidoreductase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSKLFEPAQLKQLDLQNRVVMAPMTRARTSQPGNIPNQMMATYYKQRATAGLIISEATQISDDSQGYSFTPGVYTDEQVA GWKTVTQAAKEQGAAMFCQLWHVGRVSHPTFQKGEQPIAPSALKPVETQVWIADEQGNGSMVDCVEPRAMTQADIDRVVR DFAHAAKRAIEAGFDGVEIHGGNGYLIDQFLRTNSNHRTDNYGGTRENRLRFLLEVVDAVSEAIGANKVGVRLAPFITFK DMNCPDIVPTILEASKQLQARDIAYLHLSEADWDDAPVIPESFRIELREYFTNTIIVAGSYTQDRADEVLEKGYADLVAF GRPFVSNPDLVARLQHQQPLAELDGSTLFGGNEHGYTDYPALG
Sequences:
>Translated_363_residues MSKLFEPAQLKQLDLQNRVVMAPMTRARTSQPGNIPNQMMATYYKQRATAGLIISEATQISDDSQGYSFTPGVYTDEQVA GWKTVTQAAKEQGAAMFCQLWHVGRVSHPTFQKGEQPIAPSALKPVETQVWIADEQGNGSMVDCVEPRAMTQADIDRVVR DFAHAAKRAIEAGFDGVEIHGGNGYLIDQFLRTNSNHRTDNYGGTRENRLRFLLEVVDAVSEAIGANKVGVRLAPFITFK DMNCPDIVPTILEASKQLQARDIAYLHLSEADWDDAPVIPESFRIELREYFTNTIIVAGSYTQDRADEVLEKGYADLVAF GRPFVSNPDLVARLQHQQPLAELDGSTLFGGNEHGYTDYPALG >Mature_362_residues SKLFEPAQLKQLDLQNRVVMAPMTRARTSQPGNIPNQMMATYYKQRATAGLIISEATQISDDSQGYSFTPGVYTDEQVAG WKTVTQAAKEQGAAMFCQLWHVGRVSHPTFQKGEQPIAPSALKPVETQVWIADEQGNGSMVDCVEPRAMTQADIDRVVRD FAHAAKRAIEAGFDGVEIHGGNGYLIDQFLRTNSNHRTDNYGGTRENRLRFLLEVVDAVSEAIGANKVGVRLAPFITFKD MNCPDIVPTILEASKQLQARDIAYLHLSEADWDDAPVIPESFRIELREYFTNTIIVAGSYTQDRADEVLEKGYADLVAFG RPFVSNPDLVARLQHQQPLAELDGSTLFGGNEHGYTDYPALG
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=362, Percent_Identity=46.9613259668508, Blast_Score=337, Evalue=7e-94, Organism=Escherichia coli, GI1789463, Length=354, Percent_Identity=28.8135593220339, Blast_Score=131, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17565138, Length=358, Percent_Identity=27.6536312849162, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17559802, Length=356, Percent_Identity=26.685393258427, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17540738, Length=274, Percent_Identity=29.1970802919708, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI72001454, Length=356, Percent_Identity=24.438202247191, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17559804, Length=278, Percent_Identity=28.4172661870504, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17564188, Length=267, Percent_Identity=25.8426966292135, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17566914, Length=163, Percent_Identity=32.5153374233129, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6325086, Length=379, Percent_Identity=38.7862796833773, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6321973, Length=387, Percent_Identity=36.6925064599483, Blast_Score=214, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40186; Mature: 40054
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLFEPAQLKQLDLQNRVVMAPMTRARTSQPGNIPNQMMATYYKQRATAGLIISEATQI CCCCCCCHHHHHHHHCCCEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEECHHHC SDDSQGYSFTPGVYTDEQVAGWKTVTQAAKEQGAAMFCQLWHVGRVSHPTFQKGEQPIAP CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCC SALKPVETQVWIADEQGNGSMVDCVEPRAMTQADIDRVVRDFAHAAKRAIEAGFDGVEIH CCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GGNGYLIDQFLRTNSNHRTDNYGGTRENRLRFLLEVVDAVSEAIGANKVGVRLAPFITFK CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC DMNCPDIVPTILEASKQLQARDIAYLHLSEADWDDAPVIPESFRIELREYFTNTIIVAGS CCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECC YTQDRADEVLEKGYADLVAFGRPFVSNPDLVARLQHQQPLAELDGSTLFGGNEHGYTDYP CCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCC ALG CCC >Mature Secondary Structure SKLFEPAQLKQLDLQNRVVMAPMTRARTSQPGNIPNQMMATYYKQRATAGLIISEATQI CCCCCCHHHHHHHHCCCEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEECHHHC SDDSQGYSFTPGVYTDEQVAGWKTVTQAAKEQGAAMFCQLWHVGRVSHPTFQKGEQPIAP CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCC SALKPVETQVWIADEQGNGSMVDCVEPRAMTQADIDRVVRDFAHAAKRAIEAGFDGVEIH CCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GGNGYLIDQFLRTNSNHRTDNYGGTRENRLRFLLEVVDAVSEAIGANKVGVRLAPFITFK CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC DMNCPDIVPTILEASKQLQARDIAYLHLSEADWDDAPVIPESFRIELREYFTNTIIVAGS CCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECC YTQDRADEVLEKGYADLVAFGRPFVSNPDLVARLQHQQPLAELDGSTLFGGNEHGYTDYP CCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCC ALG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]