| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977702
Identifier: 156977702
GI number: 156977702
Start: 1644943
End: 1645380
Strand: Reverse
Name: 156977702
Synonym: VIBHAR_06490
Alternate gene names: NA
Gene position: 1645380-1644943 (Counterclockwise)
Preceding gene: 156977706
Following gene: 156977701
Centisome position: 74.65
GC content: 45.43
Gene sequence:
>438_bases ATGTCTGTAAGCCAAGTAGCAAAAGAGGAAGGTATTAGCACAGCCACCCTGTATCATTGGCGGCGGCAACTTAGACGTTC AGGAGGTGCTGTGCCAAATAGTAATACTTCATCAGAGCAGTGGTCTGCTCAAACTAAACTCGCCATTGTCGCTGAAACTT ACTCGATGACGGAGAATGAACTCAGTCAGTATTGTCGCGAGAAAGGCTTGTTCCCTGAACAAGTGCAAGGTTGGCGAAGT GAGTGTATGCAAGGGTTTATGTCTGCTAAAGAGCGTGAGGCTGAAGCCAAGAAACAAGCTAAAGCTGACAAGCTTGAAAT TAAAGAGCTGAAAAAAGAGTTACGCTTTAAAGAAAAAGCTTTAGCGGAAACGGCGGCGCTATTGGTTCTTCGAAAAAAGC TGAGAGCCTTTTACGGGGAAGAGCCAGAGGAAGATTAA
Upstream 100 bases:
>100_bases TTAAAATTTAACCAGTTTGGGTGGTAATGAGTGAGTTTTGAATCGCATTCCAACAGAAAGAAAAGAAGCCATATTGAAGA AGCTACTGCCTCCTTATTCA
Downstream 100 bases:
>100_bases CCTCAACCGATGAAAGGCACTACTTGGTCACTCTTATCCACGACGCTAAGCAAAGTGGTTGCCGATTGGAGCACGCTTGC CATGAAGTTCAAATCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSVSQVAKEEGISTATLYHWRRQLRRSGGAVPNSNTSSEQWSAQTKLAIVAETYSMTENELSQYCREKGLFPEQVQGWRS ECMQGFMSAKEREAEAKKQAKADKLEIKELKKELRFKEKALAETAALLVLRKKLRAFYGEEPEED
Sequences:
>Translated_145_residues MSVSQVAKEEGISTATLYHWRRQLRRSGGAVPNSNTSSEQWSAQTKLAIVAETYSMTENELSQYCREKGLFPEQVQGWRS ECMQGFMSAKEREAEAKKQAKADKLEIKELKKELRFKEKALAETAALLVLRKKLRAFYGEEPEED >Mature_144_residues SVSQVAKEEGISTATLYHWRRQLRRSGGAVPNSNTSSEQWSAQTKLAIVAETYSMTENELSQYCREKGLFPEQVQGWRSE CMQGFMSAKEREAEAKKQAKADKLEIKELKKELRFKEKALAETAALLVLRKKLRAFYGEEPEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16594; Mature: 16463
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSQVAKEEGISTATLYHWRRQLRRSGGAVPNSNTSSEQWSAQTKLAIVAETYSMTENE CCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH LSQYCREKGLFPEQVQGWRSECMQGFMSAKEREAEAKKQAKADKLEIKELKKELRFKEKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAETAALLVLRKKLRAFYGEEPEED HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVSQVAKEEGISTATLYHWRRQLRRSGGAVPNSNTSSEQWSAQTKLAIVAETYSMTENE CHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH LSQYCREKGLFPEQVQGWRSECMQGFMSAKEREAEAKKQAKADKLEIKELKKELRFKEKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAETAALLVLRKKLRAFYGEEPEED HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA