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The map label for this gene is nisX1 [H]

Identifier: 156977701

GI number: 156977701

Start: 1643909

End: 1644919

Strand: Reverse

Name: nisX1 [H]

Synonym: VIBHAR_06489

Alternate gene names: 156977701

Gene position: 1644919-1643909 (Counterclockwise)

Preceding gene: 156977702

Following gene: 156977700

Centisome position: 74.63

GC content: 47.38

Gene sequence:

>1011_bases
TTGGTCACTCTTATCCACGACGCTAAGCAAAGTGGTTGCCGATTGGAGCACGCTTGCCATGAAGTTCAAATCGACTTGAG
AACGTATCGACGCTGGTATCAGCAAGGTGAAATACAGGCTGACAAAAGACCGACATGCGTTAGACCTGTACCAGCTAACA
AACTCTCACAGCAAGAACGTGATGCGATTATCGAGGTGTGCAACCGCCCCGAATACGCAAGTTTACCGCCAACTCAAATT
GTCCCGACGTTGCTTGATAATGGTGAGTATATCGCTTCGGAGTCGAGCTACTATCGGGTTTTGAAAGCGGAAGGTCAACT
TCATACCCGAGGTCGTCAGCGAAGTCGACCAAGGCAGGCTAAGCCAACAAGTTATACGGCAACAGGTCCCAATCAAGTGT
ACACATGGGACATTACTTACTTGCCATCTAGGGTTCGCGGTCAGCATTACTATCTCTACGTGATTGAAGATATTTATAGC
CGAAAAATCGTTGGTTACGATGTTTATGAATGTGAATGCGGTGAGTTAGCATCACAGTTATTACAGCGGACGCTGATGCG
CGAGCAATGCTTTAATCAGCCACTGGTACTTCACTCGGACAGTGGTGCGCCAATGAAGTCACTGACGTTCAGAGCGAAAA
TGGATGAGCTTGGTATCACCTCATCATACAGTCGCCCCAGAGTTAGTGATGATAACCCGTATGTTGAGTCGCTATTCCGT
ACCGTGAAGTACATGCCTAACTGGCCAACAAAAGGCTTTGAACAACTCGATGCAAGTCGTAGTTGGGTTGAGGCATTCGT
GCGTTGGTACAACACCGAGCACAAGCATAGTAAGTTAAATTACGTTACGCCATCAGAGCGTCACAGTGGTAAAGATAGCG
AGATTTTAAGACGTCGTTCTGATGTGTTGTCGGTAGCAAGAGAGCGACACCCAGAGCGTTGGTCAGGCAAAATTAGGAAC
TGTGACCCCGTTGGTGAGGTTCATCTAAATCCAGAAAGAAAAGCCGCTTAA

Upstream 100 bases:

>100_bases
TAGCGGAAACGGCGGCGCTATTGGTTCTTCGAAAAAAGCTGAGAGCCTTTTACGGGGAAGAGCCAGAGGAAGATTAACCT
CAACCGATGAAAGGCACTAC

Downstream 100 bases:

>100_bases
TAACTAAGCGAATGATGACAACTACCTTGAAAAACGCCGTAGGAGTTCATTCCGTTCTATTTTTCAGCCTTGGTATGCCT
GTATTATTCACATTTGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVTLIHDAKQSGCRLEHACHEVQIDLRTYRRWYQQGEIQADKRPTCVRPVPANKLSQQERDAIIEVCNRPEYASLPPTQI
VPTLLDNGEYIASESSYYRVLKAEGQLHTRGRQRSRPRQAKPTSYTATGPNQVYTWDITYLPSRVRGQHYYLYVIEDIYS
RKIVGYDVYECECGELASQLLQRTLMREQCFNQPLVLHSDSGAPMKSLTFRAKMDELGITSSYSRPRVSDDNPYVESLFR
TVKYMPNWPTKGFEQLDASRSWVEAFVRWYNTEHKHSKLNYVTPSERHSGKDSEILRRRSDVLSVARERHPERWSGKIRN
CDPVGEVHLNPERKAA

Sequences:

>Translated_336_residues
MVTLIHDAKQSGCRLEHACHEVQIDLRTYRRWYQQGEIQADKRPTCVRPVPANKLSQQERDAIIEVCNRPEYASLPPTQI
VPTLLDNGEYIASESSYYRVLKAEGQLHTRGRQRSRPRQAKPTSYTATGPNQVYTWDITYLPSRVRGQHYYLYVIEDIYS
RKIVGYDVYECECGELASQLLQRTLMREQCFNQPLVLHSDSGAPMKSLTFRAKMDELGITSSYSRPRVSDDNPYVESLFR
TVKYMPNWPTKGFEQLDASRSWVEAFVRWYNTEHKHSKLNYVTPSERHSGKDSEILRRRSDVLSVARERHPERWSGKIRN
CDPVGEVHLNPERKAA
>Mature_336_residues
MVTLIHDAKQSGCRLEHACHEVQIDLRTYRRWYQQGEIQADKRPTCVRPVPANKLSQQERDAIIEVCNRPEYASLPPTQI
VPTLLDNGEYIASESSYYRVLKAEGQLHTRGRQRSRPRQAKPTSYTATGPNQVYTWDITYLPSRVRGQHYYLYVIEDIYS
RKIVGYDVYECECGELASQLLQRTLMREQCFNQPLVLHSDSGAPMKSLTFRAKMDELGITSSYSRPRVSDDNPYVESLFR
TVKYMPNWPTKGFEQLDASRSWVEAFVRWYNTEHKHSKLNYVTPSERHSGKDSEILRRRSDVLSVARERHPERWSGKIRN
CDPVGEVHLNPERKAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 39115; Mature: 39115

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLIHDAKQSGCRLEHACHEVQIDLRTYRRWYQQGEIQADKRPTCVRPVPANKLSQQER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
DAIIEVCNRPEYASLPPTQIVPTLLDNGEYIASESSYYRVLKAEGQLHTRGRQRSRPRQA
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHCCHHHCCCCCC
KPTSYTATGPNQVYTWDITYLPSRVRGQHYYLYVIEDIYSRKIVGYDVYECECGELASQL
CCCCEECCCCCEEEEEEEEECCHHHCCCEEEEEEEEHHHCCEEECCCEEECCHHHHHHHH
LQRTLMREQCFNQPLVLHSDSGAPMKSLTFRAKMDELGITSSYSRPRVSDDNPYVESLFR
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
TVKYMPNWPTKGFEQLDASRSWVEAFVRWYNTEHKHSKLNYVTPSERHSGKDSEILRRRS
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHH
DVLSVARERHPERWSGKIRNCDPVGEVHLNPERKAA
HHHHHHHHCCCHHHCCCCCCCCCCCCEEECCHHCCC
>Mature Secondary Structure
MVTLIHDAKQSGCRLEHACHEVQIDLRTYRRWYQQGEIQADKRPTCVRPVPANKLSQQER
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
DAIIEVCNRPEYASLPPTQIVPTLLDNGEYIASESSYYRVLKAEGQLHTRGRQRSRPRQA
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHCCHHHCCCCCC
KPTSYTATGPNQVYTWDITYLPSRVRGQHYYLYVIEDIYSRKIVGYDVYECECGELASQL
CCCCEECCCCCEEEEEEEEECCHHHCCCEEEEEEEEHHHCCEEECCCEEECCHHHHHHHH
LQRTLMREQCFNQPLVLHSDSGAPMKSLTFRAKMDELGITSSYSRPRVSDDNPYVESLFR
HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
TVKYMPNWPTKGFEQLDASRSWVEAFVRWYNTEHKHSKLNYVTPSERHSGKDSEILRRRS
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHH
DVLSVARERHPERWSGKIRNCDPVGEVHLNPERKAA
HHHHHHHHCCCHHHCCCCCCCCCCCCEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]