| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977685
Identifier: 156977685
GI number: 156977685
Start: 1630145
End: 1630279
Strand: Reverse
Name: 156977685
Synonym: VIBHAR_06473
Alternate gene names: NA
Gene position: 1630279-1630145 (Counterclockwise)
Preceding gene: 156977687
Following gene: 156977683
Centisome position: 73.97
GC content: 42.96
Gene sequence:
>135_bases TTGCGGCGTTCATCTTCACAGACTGCTTTGCTGATGGTTTCAGCGCAACTTTTGATAGTGATAAGCCCTCATGATCAAAA GTGTTTGAATTCGCAGATGATGCGACAAGGTCGATGCCTTTTTTCTGAAAGATAG
Upstream 100 bases:
>100_bases ATCCTGATAAACCCCTCTGTAATATGATGCGCTAAGCCGACGTGTATAAATCCAATCACGGATTGGTGTAGCGACATTCA GAATGGTTGTAGTTGCGTCC
Downstream 100 bases:
>100_bases ACGTAACTTTTCAAGGCTTCAAATTTGTGATAAAGATCTCTTTTTGTGCGATCGTTAGAGGATCAAGCGAAAACAGACAC TTAACGTAGAGAGTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MRRSSSQTALLMVSAQLLIVISPHDQKCLNSQMMRQGRCLFSER
Sequences:
>Translated_44_residues MRRSSSQTALLMVSAQLLIVISPHDQKCLNSQMMRQGRCLFSER >Mature_44_residues MRRSSSQTALLMVSAQLLIVISPHDQKCLNSQMMRQGRCLFSER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5052; Mature: 5052
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 9.1 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 9.1 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSSSQTALLMVSAQLLIVISPHDQKCLNSQMMRQGRCLFSER CCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRRSSSQTALLMVSAQLLIVISPHDQKCLNSQMMRQGRCLFSER CCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA