| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is znuB [C]
Identifier: 156977676
GI number: 156977676
Start: 1622512
End: 1623306
Strand: Reverse
Name: znuB [C]
Synonym: VIBHAR_06464
Alternate gene names: 156977676
Gene position: 1623306-1622512 (Counterclockwise)
Preceding gene: 156977677
Following gene: 156977673
Centisome position: 73.65
GC content: 49.18
Gene sequence:
>795_bases ATGACAGAGTACGCATGGTTATTGCCCGCGGTACTGTGTGGCCTGATCGCGTTAGTCGGTAACGTCGTGCTTGGTCAACA AGTGCTAAAACGCCAAATCATCTTCATTGATTTGGCGGTGGCACAAGTTGCCGCATTGGGGGCCGCACTAAGTCATTATT GGCTGAACCAATACGCGCTCTTCTCGGGTTCCTTCTTCGGCGAGATGGTCGGCCCTTGGGTGATGTCGTTATTGCTGTGT GGTTTGAATGCCTTAATGGAGAAGCGTTACCAACAGCATTTGGAGCCGATGATTGGCAGCTTGTTTGTGGTCTCCGCCTC ATTGGCGATCTTACTCGTAAGTAAAGATCCGCATGGTGCAGACTTTATCCAAGGCATTCTTAACGGGCAGTTATTGTGGT CGACATGGGATGATGTGTGGCCCTTGGCATTAATAACCGCAGCGATGTTGCTGTTGGTTTGGCTAAAACCTGCATTTATG CAGGGCAGTGGCTTTTACCTGATCTTTGCTATCTTGATGCCGATTACGGTCAAGCTCACGGGCATCTATTTAGAGTTTGC TCTGTTAGTTATTCCGGCTTTGTGTGCCGCGGCGTTAAAAGGAACGAGATTCTTCATTGCGAGCATCAGTATCGGCTTTG TGGGGATTTTGTCTGGCATTTCGGCGTCAGCTCGGTACGACTTACCGAGCGGAGCGAGCATTGTGATAACTTTATTTATC GCGGGTATGCTGTTTAATCTCTTGGTTCAGCCTTGGCTGCATAAATCGCCCTCCATTAATGAAGAGACGGCGTGA
Upstream 100 bases:
>100_bases CACGGTTTCTAACGGACAAAGTCTTGATGAAATGTACGACCAAGTCATCGACGAATTGCTAGATGTGCTGGTGCAGCCTG ATCCGGTGAAGAGCTAAACC
Downstream 100 bases:
>100_bases CTATTCTCCAAATGATAAAAAGGCTCCGCGTGAACGGAGCCTTTTGTTTAGCACTGCTTTTTCTTATTAGTAACCATGTA GACTATTAATAGATTACTTA
Product: hypothetical protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ABC 3 Transport Family Protein; Zinc/Manganese Transport System Permease Protein; Mn2+/Zn2+ ABC Transporter Permease; Zinc ABC Transporter Permease Protein ZnuB; Metal Ion ABC Transporter Permease Component; ABC-Type Mn2+/Zn2+ Transport System Permease Component
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTEYAWLLPAVLCGLIALVGNVVLGQQVLKRQIIFIDLAVAQVAALGAALSHYWLNQYALFSGSFFGEMVGPWVMSLLLC GLNALMEKRYQQHLEPMIGSLFVVSASLAILLVSKDPHGADFIQGILNGQLLWSTWDDVWPLALITAAMLLLVWLKPAFM QGSGFYLIFAILMPITVKLTGIYLEFALLVIPALCAAALKGTRFFIASISIGFVGILSGISASARYDLPSGASIVITLFI AGMLFNLLVQPWLHKSPSINEETA
Sequences:
>Translated_264_residues MTEYAWLLPAVLCGLIALVGNVVLGQQVLKRQIIFIDLAVAQVAALGAALSHYWLNQYALFSGSFFGEMVGPWVMSLLLC GLNALMEKRYQQHLEPMIGSLFVVSASLAILLVSKDPHGADFIQGILNGQLLWSTWDDVWPLALITAAMLLLVWLKPAFM QGSGFYLIFAILMPITVKLTGIYLEFALLVIPALCAAALKGTRFFIASISIGFVGILSGISASARYDLPSGASIVITLFI AGMLFNLLVQPWLHKSPSINEETA >Mature_263_residues TEYAWLLPAVLCGLIALVGNVVLGQQVLKRQIIFIDLAVAQVAALGAALSHYWLNQYALFSGSFFGEMVGPWVMSLLLCG LNALMEKRYQQHLEPMIGSLFVVSASLAILLVSKDPHGADFIQGILNGQLLWSTWDDVWPLALITAAMLLLVWLKPAFMQ GSGFYLIFAILMPITVKLTGIYLEFALLVIPALCAAALKGTRFFIASISIGFVGILSGISASARYDLPSGASIVITLFIA GMLFNLLVQPWLHKSPSINEETA
Specific function: Involved In The High-Affinity Zinc Uptake Transport System. [C]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28661; Mature: 28529
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYAWLLPAVLCGLIALVGNVVLGQQVLKRQIIFIDLAVAQVAALGAALSHYWLNQYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGSFFGEMVGPWVMSLLLCGLNALMEKRYQQHLEPMIGSLFVVSASLAILLVSKDPHGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCH DFIQGILNGQLLWSTWDDVWPLALITAAMLLLVWLKPAFMQGSGFYLIFAILMPITVKLT HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GIYLEFALLVIPALCAAALKGTRFFIASISIGFVGILSGISASARYDLPSGASIVITLFI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AGMLFNLLVQPWLHKSPSINEETA HHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TEYAWLLPAVLCGLIALVGNVVLGQQVLKRQIIFIDLAVAQVAALGAALSHYWLNQYAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGSFFGEMVGPWVMSLLLCGLNALMEKRYQQHLEPMIGSLFVVSASLAILLVSKDPHGA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCH DFIQGILNGQLLWSTWDDVWPLALITAAMLLLVWLKPAFMQGSGFYLIFAILMPITVKLT HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GIYLEFALLVIPALCAAALKGTRFFIASISIGFVGILSGISASARYDLPSGASIVITLFI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AGMLFNLLVQPWLHKSPSINEETA HHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA