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The map label for this gene is 156977677

Identifier: 156977677

GI number: 156977677

Start: 1623310

End: 1624236

Strand: Reverse

Name: 156977677

Synonym: VIBHAR_06465

Alternate gene names: NA

Gene position: 1624236-1623310 (Counterclockwise)

Preceding gene: 156977678

Following gene: 156977676

Centisome position: 73.69

GC content: 50.81

Gene sequence:

>927_bases
ATGCGTTCTAAGCTTACGCTCAGTAAATGCAGTGTAGCGATGATGGCGGCGGGGGCTGCCATCATCTCTTCGCCTGCTTT
GGCGCTGAACATCTTCGTCTGCGAGCCAGAATGGAAAGCCTTTCTTGAAAGCCATGCGCCAGACGCCACCATCTATTCTG
CGACGACCGCTAAGCAAGATCCCCATTACGTGCAAGCGCGTCCTTCTTTAATTGCCAAAATGCGCCAAGCGGACATCGCA
ATGTGTTCTGGTGCGGAGCTAGAAGTCGGGTGGCTGCCAATGCTGCAAGTTCGCAGTAGTAATAGCGCGGTGCAAAATGG
CGCATCAAGCATGGTTTACGCGACCGATTTCGTGCGTATGTTAGACACTCATGATCATGTCGACCGCAGTATGGGGGACA
TACATGCGCACGGAAACCCACATGTGCAGTTTGCGGCGAATGACATGATTCCCCTGTCACGGGCGATCACTGATCGCTTG
AAAACCATCGATCCAGATAACGCGCCAACCTACCAACTTAACGGCATGAAGTTCCGAGCTCATTGGCGCAAAAAGCTGAA
TGAGTGGCACGAGAAAGCGGCACCGTTAAAAGGCAAACAAGTTGTCGGTTATCACGCTACCTATCGTTATCTTTACGATT
GGCTTGGTATGGAGCAAATCGCTGACCTTGAACCGAAGCCGGGAATCTCGCCAACCACTTCTCATCTGCAATCATTAACC
AAGTTAGAGGCCAATAGTTTTGATGCGATTGTATTCTCATCGCACCAAGATAAACGCCCCGCGAACTGGTTACAGCAGCA
GACAGACAAGCCTCTGATCCAGTTACCGCTCACGGTTTCTAACGGACAAAGTCTTGATGAAATGTACGACCAAGTCATCG
ACGAATTGCTAGATGTGCTGGTGCAGCCTGATCCGGTGAAGAGCTAA

Upstream 100 bases:

>100_bases
ACAATCCGAGCGCAATACTCTCGTATCGACAACCAAGACAGCGAGACAGACAACGTATTCACTCTGCAATACGTGATGAC
ATTTGGAGCGCACGGTGCAC

Downstream 100 bases:

>100_bases
ACCATGACAGAGTACGCATGGTTATTGCCCGCGGTACTGTGTGGCCTGATCGCGTTAGTCGGTAACGTCGTGCTTGGTCA
ACAAGTGCTAAAACGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Periplasmic Adhesin; BC-Type Metal Ion Transport System Periplasmic Component.

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRSKLTLSKCSVAMMAAGAAIISSPALALNIFVCEPEWKAFLESHAPDATIYSATTAKQDPHYVQARPSLIAKMRQADIA
MCSGAELEVGWLPMLQVRSSNSAVQNGASSMVYATDFVRMLDTHDHVDRSMGDIHAHGNPHVQFAANDMIPLSRAITDRL
KTIDPDNAPTYQLNGMKFRAHWRKKLNEWHEKAAPLKGKQVVGYHATYRYLYDWLGMEQIADLEPKPGISPTTSHLQSLT
KLEANSFDAIVFSSHQDKRPANWLQQQTDKPLIQLPLTVSNGQSLDEMYDQVIDELLDVLVQPDPVKS

Sequences:

>Translated_308_residues
MRSKLTLSKCSVAMMAAGAAIISSPALALNIFVCEPEWKAFLESHAPDATIYSATTAKQDPHYVQARPSLIAKMRQADIA
MCSGAELEVGWLPMLQVRSSNSAVQNGASSMVYATDFVRMLDTHDHVDRSMGDIHAHGNPHVQFAANDMIPLSRAITDRL
KTIDPDNAPTYQLNGMKFRAHWRKKLNEWHEKAAPLKGKQVVGYHATYRYLYDWLGMEQIADLEPKPGISPTTSHLQSLT
KLEANSFDAIVFSSHQDKRPANWLQQQTDKPLIQLPLTVSNGQSLDEMYDQVIDELLDVLVQPDPVKS
>Mature_308_residues
MRSKLTLSKCSVAMMAAGAAIISSPALALNIFVCEPEWKAFLESHAPDATIYSATTAKQDPHYVQARPSLIAKMRQADIA
MCSGAELEVGWLPMLQVRSSNSAVQNGASSMVYATDFVRMLDTHDHVDRSMGDIHAHGNPHVQFAANDMIPLSRAITDRL
KTIDPDNAPTYQLNGMKFRAHWRKKLNEWHEKAAPLKGKQVVGYHATYRYLYDWLGMEQIADLEPKPGISPTTSHLQSLT
KLEANSFDAIVFSSHQDKRPANWLQQQTDKPLIQLPLTVSNGQSLDEMYDQVIDELLDVLVQPDPVKS

Specific function: Unknown

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34323; Mature: 34323

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKLTLSKCSVAMMAAGAAIISSPALALNIFVCEPEWKAFLESHAPDATIYSATTAKQD
CCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCEEEECCCCCCC
PHYVQARPSLIAKMRQADIAMCSGAELEVGWLPMLQVRSSNSAVQNGASSMVYATDFVRM
CCEECCCHHHHHHHHHHHHHEECCCEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHH
LDTHDHVDRSMGDIHAHGNPHVQFAANDMIPLSRAITDRLKTIDPDNAPTYQLNGMKFRA
HHHHHHHHHHHCCEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCEEHHH
HWRKKLNEWHEKAAPLKGKQVVGYHATYRYLYDWLGMEQIADLEPKPGISPTTSHLQSLT
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHH
KLEANSFDAIVFSSHQDKRPANWLQQQTDKPLIQLPLTVSNGQSLDEMYDQVIDELLDVL
HHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
VQPDPVKS
CCCCCCCC
>Mature Secondary Structure
MRSKLTLSKCSVAMMAAGAAIISSPALALNIFVCEPEWKAFLESHAPDATIYSATTAKQD
CCCCCCHHHHHHHHHHHCHHHHCCCCEEEEEEEECHHHHHHHHHCCCCCEEEECCCCCCC
PHYVQARPSLIAKMRQADIAMCSGAELEVGWLPMLQVRSSNSAVQNGASSMVYATDFVRM
CCEECCCHHHHHHHHHHHHHEECCCEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHH
LDTHDHVDRSMGDIHAHGNPHVQFAANDMIPLSRAITDRLKTIDPDNAPTYQLNGMKFRA
HHHHHHHHHHHCCEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCEEHHH
HWRKKLNEWHEKAAPLKGKQVVGYHATYRYLYDWLGMEQIADLEPKPGISPTTSHLQSLT
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHH
KLEANSFDAIVFSSHQDKRPANWLQQQTDKPLIQLPLTVSNGQSLDEMYDQVIDELLDVL
HHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
VQPDPVKS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA