| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977659
Identifier: 156977659
GI number: 156977659
Start: 1603520
End: 1604149
Strand: Reverse
Name: 156977659
Synonym: VIBHAR_06447
Alternate gene names: NA
Gene position: 1604149-1603520 (Counterclockwise)
Preceding gene: 156977660
Following gene: 156977658
Centisome position: 72.78
GC content: 32.22
Gene sequence:
>630_bases TTGGAGAGATCTAACCTTATATACGCTTATGGTGATGATATATTTTCTGAAAAACATAAATTGTCAGGGAATTTTGATGA TGACTTGATTGTCAGCTTGAAGTATAGGTACGGATTAGGTTTAAATAAAGATCTTGAAAAGTCTTCAGACATTTTATTGT CGTATTCTGACTCCCAGATTGGGAATGATAAAGGTGATTTAGGGATGAAGTATTATCTTCTCGGCACCTACAATTATTCT TGTAAAAACCCCGTTAAAGGCCTCGAATACCTAAAAAAGTCAAATGAATATGGGTATGTTAAGTCGAATTTCTTATACGG ATATATTTCTTACTATGGCCTAAGAGAAAAAATTACGACGGAAGACTATTTTTCTATATTAAAAAAAGGAATGCAAAATG CGGATGGTTACTCAATTTTTCAATATATATATTTGTCGTTTACTACCGGAGAAATAACTGGTGTTACCGATTGGATAGAT ATTATAGAAAAAATGAACTTGTTCTCAACGTGCGATTTATACAATTTTCATAAATTTGGTGTTGGGGTTGGTGGTCTTAT CTCCGATTGGGAATCGAAAAAATTAATAATTAGAAAGCTGTGGCCGGAATATAATTTAAAGTGTGAATAA
Upstream 100 bases:
>100_bases TAATCAAAAGGAGGTGGTTTTGAATTGGATTAAATGTTTTACTTTTTTATCTTTATTTGCGTGTTTTAACATTAGTTCAT GTGAGTTGTATTTATATAAT
Downstream 100 bases:
>100_bases AGGAAACACTAACATGTCAAAAAAGCTAGATTTAGTTAGGGATGTAATTAGCGCAAATCAACATACGAATGATATTAACA AACTGGATAGTGAGTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MERSNLIYAYGDDIFSEKHKLSGNFDDDLIVSLKYRYGLGLNKDLEKSSDILLSYSDSQIGNDKGDLGMKYYLLGTYNYS CKNPVKGLEYLKKSNEYGYVKSNFLYGYISYYGLREKITTEDYFSILKKGMQNADGYSIFQYIYLSFTTGEITGVTDWID IIEKMNLFSTCDLYNFHKFGVGVGGLISDWESKKLIIRKLWPEYNLKCE
Sequences:
>Translated_209_residues MERSNLIYAYGDDIFSEKHKLSGNFDDDLIVSLKYRYGLGLNKDLEKSSDILLSYSDSQIGNDKGDLGMKYYLLGTYNYS CKNPVKGLEYLKKSNEYGYVKSNFLYGYISYYGLREKITTEDYFSILKKGMQNADGYSIFQYIYLSFTTGEITGVTDWID IIEKMNLFSTCDLYNFHKFGVGVGGLISDWESKKLIIRKLWPEYNLKCE >Mature_209_residues MERSNLIYAYGDDIFSEKHKLSGNFDDDLIVSLKYRYGLGLNKDLEKSSDILLSYSDSQIGNDKGDLGMKYYLLGTYNYS CKNPVKGLEYLKKSNEYGYVKSNFLYGYISYYGLREKITTEDYFSILKKGMQNADGYSIFQYIYLSFTTGEITGVTDWID IIEKMNLFSTCDLYNFHKFGVGVGGLISDWESKKLIIRKLWPEYNLKCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24236; Mature: 24236
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSNLIYAYGDDIFSEKHKLSGNFDDDLIVSLKYRYGLGLNKDLEKSSDILLSYSDSQI CCCCCEEEEECCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCC GNDKGDLGMKYYLLGTYNYSCKNPVKGLEYLKKSNEYGYVKSNFLYGYISYYGLREKITT CCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCEEEEHHHHHHHHHCCH EDYFSILKKGMQNADGYSIFQYIYLSFTTGEITGVTDWIDIIEKMNLFSTCDLYNFHKFG HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHC VGVGGLISDWESKKLIIRKLWPEYNLKCE CCCCCHHCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MERSNLIYAYGDDIFSEKHKLSGNFDDDLIVSLKYRYGLGLNKDLEKSSDILLSYSDSQI CCCCCEEEEECCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCC GNDKGDLGMKYYLLGTYNYSCKNPVKGLEYLKKSNEYGYVKSNFLYGYISYYGLREKITT CCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCEEEEHHHHHHHHHCCH EDYFSILKKGMQNADGYSIFQYIYLSFTTGEITGVTDWIDIIEKMNLFSTCDLYNFHKFG HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHCCCCCHHHHC VGVGGLISDWESKKLIIRKLWPEYNLKCE CCCCCHHCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA